LOC118938151 (LOC106592341)


Basic Information

Item Value
gene id LOC118938151
gene name LOC106592341
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 4313122 ~ 4321279 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036939904.1
gactattgccATACTCGGCCTTCACCCATAATCAGTTTTAATATCAAATAGTTAGTGTGAATGTAAACGTGGTAGGTGATCGATTGACCGACAACCAATTAGAATGTGGTTGAGGAAACATTGTGTCGAGTGGGCGGGGAGAGAACGACAGACGGACTGCTTTCACAAACTCTTGACACTTTCTCTCACAGTCGCCCTAGTAAGGATTAACCTACTTTCACTCTTCTGACCCTCGACATGTCAAACAACAACGCCAGCAGCAACTTGGTCGTCGCTCAGAGAGTAGTGAAACAGCTGCGGCTGGAGGCCAGTGTCCGTAGGATCAAGGTGTCTCAGGCTGCAGTGGACCTGAAGAACTACTGTCTGCAGAACGCTCACCAGGACCCTCTCCTGATGGGGGTCCCCTCCAGTGACAACCCCTTCAGACCCCCCAAGTCCTGCAGCCTGTTCTGAGcagcAGTCAGTGTATGGAGGAGGAGTTGTTGCTGTATGTCCTATGAGGgacccttcctcttctctctctactgctggtCCATTTGTGTGTTGCAGCTATCCctctagcctgatcccagatctggcATGCCAAGGCACGACAATGACCAAAGATGTTGGCAAGaccgcacaaacagatctgggaccaggctagacaGTCTGTGTATTAAGATAAAGCCTAGTAGTGCCATTATACATGTATGTTCAGGATGTTGATGTGATATCCTATTTGTTATGATGATCATGATGATGACATTGTATTAGGGTTGTAACTTCCTGAAAATTCCCCAGTTTTCCAGAAATTCCTGTTGTAAGATTCCTGGAATCGGGAGGGAATAAGCAGAAAACCCAGGAATCTTCTACTGGAATTTCTGGAAAAATCTGTCAAGTTTTGGAAAGTTACTGTAGTTCTCCAACCCTACATTGTATCTATGCACTGTACTTTCCACCAGTATGATTATCAGCCTctgacaggcaggcagccagTGAATGTGCCTTTGAGGTTGtctcccaaatagcaccatattccctatatagtgcactactttagaccagagccctatagtgcagtatatagagaatagggtgttatttgggatgcaacTTATGTGTCCGACGACATGTTCCGCACAATAAGGAAGTGACCAACCGTTGAATGTTTTAACCAGGGTACGTATTGATATTTAGCCTACAGTTCTAGCCTATTGGCCTACATGCTGTCCTGTCACCTTCTATTGCTTGTGTTCCACGTGCAGTATACTTCCTGGTACAAACTACCACATGGTACAGGTTGACATTCTCAACCCAGGGATCCAGAACCATAGAATTAGAATCTAGAATTAATGCGGAACACTAACCACATCTCCCCAGTTGTACTCTATACAAGAGACTGGCAGTTACATGTTTCTTTTAAACTTTCGTCAACCTATTTTATTTAAGATTTTATGAAATAATCTGCCTTTTTATCGAAGGGTTCGTTCATTCGGTTGTGATGATACTGATGTGATCTTAAATGTTACATTGTTGTGCCCTCCTGTACCTTTTTTTTAGGAAGACACTCCTGTCCTTGGCCTTTTTCCCTGGAAATACTCATGTCCTTCTCACGTTTTTTCCACTAGCCTACATTCAGTCACAGATAACACTATAGCATGGTTTTCCACTAGCCTACATTCAGTCACAGATAACACTATAGCATGGTTTTACACTAGCCTACATTCAGTCACAGATAACACTATAGCATGGTTTTACACTAGCCTACATTCAGTCACAGATAACACTATAGCATGGTTTTACACTAGCCTACATTCAGTCACAGATAACACTATAGCATGGTTTAACACTAGCCTACATTCAGTCACAGATAACACTATAGCATGGTTTTACACTAGCCTACATTCAGTCACAGATAACACTATAGCAAATGGGAACGCATTTAACTAAGACAAACAACACCCCATTTCCATATGCCACAGCTGGTGCTTCGGCTTGTTTCAGGTTACTGATTAGCCACATCACCATGACTACCATTTTTATGATTCCATCAGCCTACATCGCAGTTTGTTTTCATCGTTGAACTGTGAGCGTGGAACTGTCTAGCCTCGCTACCGGCCTTGTATGAGGAGTTTTAATTTGATACCTGATATACTGTCCATCCTCTGTGCCTGAACTTTGTAACTGTGTTATACTGTCCATCCTCTGTGCCTTAACTTTGTAACTGTGTTATACTGTCGATCATCTGTGCCTTAACTTTGTAACTGTGTTATACTGTCGATCCTCTGTGCCTGAACTTTGTAACTGTGTTATACTGTCTATCCTCTGTGCCTTAACTTTGTAACTGTGTTATACTGTCCATCCTCTGTTTCTGAACTTTGTAACTGTGTTATACTGTCCATCCTCTGTTTCTGAACTTTGTAACTGTGTCATACTGTCTATCCTCTGTGCCTGAACTTTGTAACTGTGTCATACTGTCTATCCTCTGTGCCTTAACTTTGTAACTGTGTTATACTGTCCATCCTCTGTTTCTGAACTTTGTAACTGTGTTATACTGTCCATCCTCTGTTTCTGAACTTTGTAACTGTGTCATACTGTCTATCCTCTGTGCCTTAACTTTGTAACTGTGTTATACTGTCCATCCTCTGTTTCTGAACTTTGTAACTGTGTTATACTGTCCATCCTCTGTTTCTGAACTTTGTAACTGTGTCATACTGTCTATCCTCTGTGCCTTAACTTTGTAACTGTGTTATACTGTCCATCCTCTGTGCCTTAACTTTGTAACTGTGTTTCCAACCTAGTAAATCACATTTAccac
>XM_036939906.1
gtgtttacatgactattgccATACTCGGCCTTCACCCATAATCAGTTTTAATATCAAATAGTTAGTGTGAATGTAAACGTGGTAGGTGATCGATTGACCGACAACCAATTAGAATGTGGTTGAGGAAACATTGTGTCGAGTGGGCGGGGAGAGAACGACAGACGGACTGCTTTCACAAACTCTTGACACTTTCTCTCACAGTCGCCCTAGTAAGGATTAACCTACTTTCACTCTTCTGACCCTCGACATGTCAAACAACAACGCCAGCAGCAACTTGGTCGTCGCTCAGAGAGTAGTGAAACAGCTGCGGCTGGAGGCCAGTGTCCGTAGGATCAAGGTGTCTCAGGCTGCAGTGGACCTGAAGAACTACTGTCTGCAGAACGCTCACCAGGACCCTCTCCTGATGGGGGTCCCCTCCAGTGACAACCCCTTCAGACCCCCCAAGTCCTGCAGCCTGTTCTGAGcAGTCAGTGTATGGAGGAGGAGTTGTTGCTGTATGTCCTATGAGGgacccttcctcttctctctctactgctggtCCATTTGTGTGTTGCAGCTATCCctctagcctgatcccagatctggcATGCCAAGGCACGACAATGACCAAAGATGTTGGCAAGaccgcacaaacagatctgggaccaggctagacaGTCTGTGTATTAAGATAAAGCCTAGTAGTGCCATTATACATGTATGTTCAGGATGTTGATGTGATATCCTATTTGTTATGATGATCATGATGATGACATTGTATTAGGGTTGTAACTTCCTGAAAATTCCCCAGTTTTCCAGAAATTCCTGTTGTAAGATTCCTGGAATCGGGAGGGAATAAGCAGAAAACCCAGGAATCTTCTACTGGAATTTCTGGAAAAATCTGTCAAGTTTTGGAAAGTTACTGTAGTTCTCCAACCCTACATTGTATCTATGCACTGTACTTTCCACCAGTATGATTATCAGCCTctgacaggcaggcagccagTGAATGTGCCTTTGAGGTTGtctcccaaatagcaccatattccctatatagtgcactactttagaccagagccctatagtgcagtatatagagaatagggtgttatttgggatgcaacTTATGTGTCCGACGACATGTTCCGCACAATAAGGAAGTGACCAACCGTTGAATGTTTTAACCAGGGTACGTATTGATATTTAGCCTACAGTTCTAGCCTATTGGCCTACATGCTGTCCTGTCACCTTCTATTGCTTGTGTTCCACGTGCAGTATACTTCCTGGTACAAACTACCACATGGTACAGGTTGACATTCTCAACCCAGGGATCCAGAACCATAGAATTAGAATCTAGAATTAATGCGGAACACTAACCACATCTCCCCAGTTGTACTCTATACAAGAGACTGGCAGTTACATGTTTCTTTTAAACTTTCGTCAACCTATTTTATTTAAGATTTTATGAAATAATCTGCCTTTTTATCGAAGGGTTCGTTCATTCGGTTGTGATGATACTGATGTGATCTTAAATGTTACATTGTTGTGCCCTCCTGTACCTTTTTTTTAGGAAGACACTCCTGTCCTTGGCCTTTTTCCCTGGAAATACTCATGTCCTTCTCACGTTTTTTCCACTAGCCTACATTCAGTCACAGATAACACTATAGCATGGTTTTCCACTAGCCTACATTCAGTCACAGATAACACTATAGCATGGTTTTACACTAGCCTACATTCAGTCACAGATAACACTATAGCATGGTTTTACACTAGCCTACATTCAGTCACAGATAACACTATAGCATGGTTTTACACTAGCCTACATTCAGTCACAGATAACACTATAGCATGGTTTAACACTAGCCTACATTCAGTCACAGATAACACTATAGCATGGTTTTACACTAGCCTACATTCAGTCACAGATAACACTATAGCAAATGGGAACGCATTTAACTAAGACAAACAACACCCCATTTCCATATGCCACAGCTGGTGCTTCGGCTTGTTTCAGGTTACTGATTAGCCACATCACCATGACTACCATTTTTATGATTCCATCAGCCTACATCGCAGTTTGTTTTCATCGTTGAACTGTGAGCGTGGAACTGTCTAGCCTCGCTACCGGCCTTGTATGAGGAGTTTTAATTTGATACCTGATATACTGTCCATCCTCTGTGCCTGAACTTTGTAACTGTGTTATACTGTCCATCCTCTGTGCCTTAACTTTGTAACTGTGTTATACTGTCGATCATCTGTGCCTTAACTTTGTAACTGTGTTATACTGTCGATCCTCTGTGCCTGAACTTTGTAACTGTGTTATACTGTCTATCCTCTGTGCCTTAACTTTGTAACTGTGTTATACTGTCCATCCTCTGTTTCTGAACTTTGTAACTGTGTTATACTGTCCATCCTCTGTTTCTGAACTTTGTAACTGTGTCATACTGTCTATCCTCTGTGCCTGAACTTTGTAACTGTGTCATACTGTCTATCCTCTGTGCCTTAACTTTGTAACTGTGTTATACTGTCCATCCTCTGTTTCTGAACTTTGTAACTGTGTTATACTGTCCATCCTCTGTTTCTGAACTTTGTAACTGTGTCATACTGTCTATCCTCTGTGCCTTAACTTTGTAACTGTGTTATACTGTCCATCCTCTGTTTCTGAACTTTGTAACTGTGTTATACTGTCCATCCTCTGTTTCTGAACTTTGTAACTGTGTCATACTGTCTATCCTCTGTGCCTTAACTTTGTAACTGTGTTATACTGTCCATCCTCTGTGCCTTAACTTTGTAACTGTGTTTCCAACCTAGTAAATCACATTTAccac
>TU1296929
GAACGACAGACGGACTGCTTTCACAAACTCTTGACACTTTCTCTCACAGTCGCCCTAGTAAGGATTAACCTACTTTCACTCTTCTGACCCTCGACATGTCAAACAACAACGCCAGCAGCAACTTGGTCGTCGCTCAGAGAGTAGTGAAACAGCTGCGGCTGGAGGCCAGTGTCCGTAGGATCAAGGTGTCTCAGGCTGCAGTGGACCTGAAGAACTACTGTCTGCAGAACGCTCACCAGGACCCTCTCCTGATGGGGGTCCCCTCCAGTGACAACCCCTTCAGACCCCCCAAGTCCTGCAGCCTGTTCTGAGcagcAGTCAGTGTATGGAGGAGGAGTTGTTGCTGTATGTCCTATGAGGgacccttcctcttctctctctactgctggtCCATTTGTGTGTTGCAGCTATCCctctagcctgatcccagatctggcATGCCAAGGCACGACAATGACCAAAGATGTTGGCAAGaccgcacaaacagatctgggaccaggctagacaGTCTGTGTATTAAGATAAAGCCTAGTAGTGCCATTATACATGTATGTTCAGGATGTTGATGTGATATCCTATTTGTTATGATGATCATGATGATGACATTGTATTAGGGTTGTAACTTCCTGAAAATTCCCCAGTTTTCCAGAAATTCCTGTTGTAAGATTCCTGGAATCGGGAGGGAATAAGCAGAAAACCCAGGAATCTTCTACTGGAATTTCTGGAAAAATCTGTCAAGTTTTGGAAAGTTACTGTAGTTCTCCAACCCTACATTGTATCTATGCACTGTACTTTCCACCAGTATGATTATCAGCCTctgacaggcaggcagccagTGAATGTGCCTTTGAGGTTGtctcccaaatagcaccatattccctatatagtgcactactttagaccagagccctatagtgcagtatatagagaatagggtgttatttgggatgcaacTTATGTGTCCGACGACATGTTCCGCACAATAAGGAAGTGACCAACCGTTGAATGTTTTAACCAGGGTACGTATTGATATTTAGCCTACAGTTCTAGCCTATTGGCCTACATGCTGTCCTGTCACCTTCTATTGCTTGTGTTCCACGTGCAGTATACTTCCTGGTACAAACTACCACATGGTACAGGTTGACATTCTCAACCCAGGGATCCAGAACCATAGAATTAGAATCTAGAATTAATGCGGAACACTAACCACATCTCCCCAGTTGTACTCTATACAAGAGACTGGCAGTTACATGTTTCTTTTAAACTTTCGTCAACCTATTTTATTTAAGATTTTATGAAATAATCTGCCTTTTTATCGAAGGGTTCGTTCATTCGGTTGTGATGATACTGATGTGATCTTAAATGTTACATTGTTGTGCCCTCCTGTACCTTTTTTTTAGGAAGACACTCCTGTCCTTGGCCTTTTTCCCTGGAAATACTCATGTCCTTCTCACGTTTTTTCCACTAGCCTACATTCAGTCACAGATAACACTATAGCATGGTTTTCCACTAGCCTACATTCAGTCACAGATAACACTATAGCATGGTTTTACACTAGCCTACATTCAGTCACAGATAACACTATAGCATGGTTTTACACTAGCCTACATTCAGTCACAGATAACACTATAGCATGGTTTTACACTAGCCTACATTCAGTCACAGATAACACTATAGCATGGTTTAACACTAGCCTACATTCAGTCACAGATAACACTATAGCATGGTTTTACACTAGCCTACATTCAGTCACAGATAACACTATAGCAAATGGGAACGCATTTAACTAAGACAAACAACACCCCATTTCCATATGCCACAGCTGGTGCTTCGGCTTGTTTCAGGTTACTGATTAGCCACATCACCATGACTACCATTTTTATGATTCCATCAGCCTACATCGCAGTTTGTTTTCATCGTTGAACTGTGAGCGTGGAACTGTCTAGCCTCGCTACCGGCCTTGTATGAGGAGTTTTAATTTGATACCTGATATACTGTCCATCCTCTGTGCCTGAACTTTGTAACTGTGTTATACTGTCCATCCTCTGTGCCTTAACTTTGTAACTGTGTTATACTGTCGATCATCTGTGCCTTAACTTTGTAACTGTGTTATACTGTCGATCCTCTGTGCCTGAACTTTGTAACTGTGTTATACTGTCTATCCTCTGTGCCTTAACTTTGTAACTGTGTTATACTGTCCATCCTCTGTTTCTGAACTTTGTAACTGTGTTATACTGTCCATCCTCTGTTTCTGAACTTTGTAACTGTGTCATACTGTCTATCCTCTGTGCCTGAACTTTGTAACTGTGTCATACTGTCTATCCTCTGTGCCTTAACTTTGTAACTGTGTTATACTGTCCATCCTCTGTTTCTGAACTTTGTAACTGTGTTATACTGTCCATCCTCTGTTTCTGAACTTTGTAACTGTGTCATACTGTCTATCCTCTGTGCCTTAACTTTGTAACTGTGTTATACTGTCCATCCTCTGTTTCTGAACTTTGTAACTGTGTTATACTGTCCATCCTCTGTTTCTGAACTTTGTAACTGTGTCATACTGTCTATCCTCTGTGCCTTAACTTTGTAACTGTGTTATACTGTCCATCCTCTGTGCCTTAACTTTGTAACTGTGTTTCCAACCTAGTAAATCACATTTAc

Function

NR:

description
PREDICTED: guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036939904.1 False 2800 mRNA 0.43 3 4313122 4321269
XM_036939906.1 False 2807 mRNA 0.42 3 4313122 4321279
TU1296929 True 2655 lncRNA 0.42 3 4313125 4321127

Neighbor

gene id symbol gene type direction distance location
LOC110485404 LOC106591939 coding downstream 685 4293455 ~ 4312437 (-)
LOC110493382 LOC106564272 coding downstream 29925 4271881 ~ 4283197 (-)
rtnanos3 rtnanos3 coding downstream 41695 4269699 ~ 4271427 (-)
LOC110495140 LOC106592331 coding downstream 50546 4261402 ~ 4262576 (-)
LOC110495042 LOC106592322 coding downstream 58270 4254025 ~ 4254852 (-)
LOC110519427 LOC106592376 coding upstream 4493 4325772 ~ 4337660 (-)
LOC118936518 LOC106606801 coding upstream 285075 4606354 ~ 4612954 (-)
LOC118938535 LOC106591275 coding upstream 298943 4620222 ~ 4622987 (-)
LOC118938536 NA coding upstream 415934 4737213 ~ 4741711 (-)
LOC118938155 LOC106564258 coding upstream 433799 4755078 ~ 4767260 (-)
G1138116 NA non-coding downstream 6393 4306112 ~ 4306729 (-)
G1138008 NA non-coding downstream 21713 4291073 ~ 4291409 (-)
G1138106 NA non-coding downstream 46446 4266474 ~ 4266676 (-)
G1138105 NA non-coding downstream 47787 4265052 ~ 4265335 (-)
G1138140 NA non-coding upstream 46815 4368094 ~ 4368888 (-)
G1138150 NA non-coding upstream 64169 4385448 ~ 4435108 (-)
G1138151 LOC106606801 non-coding upstream 74242 4394745 ~ 4421260 (-)
G1138166 NA non-coding upstream 97883 4419162 ~ 4419956 (-)
G1138152 NA non-coding upstream 106110 4427389 ~ 4434767 (-)
G1137672 LOC106595836 other downstream 547306 3765282 ~ 3765816 (-)
G1137666 NA other downstream 579822 3731621 ~ 3733300 (-)
LOC110487308 LOC106595461 other downstream 780998 3521685 ~ 3532141 (-)
LOC110514041 LOC106585204 other downstream 1124938 3161191 ~ 3197982 (-)
G1137174 NA other downstream 1182569 3129613 ~ 3130553 (-)
G1138232 NA other upstream 298216 4619495 ~ 4620179 (-)
G1138568 NA other upstream 836886 5158165 ~ 5162954 (-)
G1138553 LOC106592646 other upstream 879776 5201055 ~ 5262513 (-)
LOC118936520 NA other upstream 896412 5216411 ~ 5244441 (-)

Expression


Co-expression Network