Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118938535 |
| gene name | LOC106591275 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 4620222 ~ 4622987 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: trem-like transcript 4 protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005035754.1 | True | 223 | mRNA | 0.48 | 3 | 4620222 | 4622987 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936518 | LOC106606801 | coding | downstream | 7268 | 4606354 ~ 4612954 (-) |
| LOC110519427 | LOC106592376 | coding | downstream | 282562 | 4325772 ~ 4337660 (-) |
| LOC118938151 | LOC106592341 | coding | downstream | 298943 | 4313122 ~ 4321279 (-) |
| LOC110485404 | LOC106591939 | coding | downstream | 307785 | 4293455 ~ 4312437 (-) |
| LOC110493382 | LOC106564272 | coding | downstream | 337025 | 4271881 ~ 4283197 (-) |
| LOC118938536 | NA | coding | upstream | 114226 | 4737213 ~ 4741711 (-) |
| LOC118938155 | LOC106564258 | coding | upstream | 132091 | 4755078 ~ 4767260 (-) |
| LOC118936519 | LOC106564260 | coding | upstream | 147692 | 4770679 ~ 4796554 (-) |
| LOC110493400 | as1la | coding | upstream | 174772 | 4797759 ~ 4807623 (-) |
| LOC110510582 | LOC106592158 | coding | upstream | 191758 | 4814745 ~ 4838008 (-) |
| G1138232 | NA | non-coding | downstream | 43 | 4619495 ~ 4620179 (-) |
| G1138228 | NA | non-coding | downstream | 11339 | 4608103 ~ 4608883 (-) |
| G1138225 | NA | non-coding | downstream | 17906 | 4601829 ~ 4602316 (-) |
| G1138221 | NA | non-coding | downstream | 32031 | 4587501 ~ 4588191 (-) |
| G1138186 | NA | non-coding | downstream | 120734 | 4498658 ~ 4499488 (-) |
| G1138234 | NA | non-coding | upstream | 2816 | 4625803 ~ 4626333 (-) |
| G1138236 | NA | non-coding | upstream | 4725 | 4627712 ~ 4630863 (-) |
| G1138309 | NA | non-coding | upstream | 114508 | 4737495 ~ 4738362 (-) |
| G1138315 | LOC100194703 | non-coding | upstream | 124730 | 4747717 ~ 4750557 (-) |
| G1138320 | NA | non-coding | upstream | 132725 | 4755712 ~ 4758159 (-) |
| G1138151 | LOC106606801 | other | downstream | 198962 | 4394745 ~ 4421260 (-) |
| G1137672 | LOC106595836 | other | downstream | 854406 | 3765282 ~ 3765816 (-) |
| G1137666 | NA | other | downstream | 886922 | 3731621 ~ 3733300 (-) |
| LOC110487308 | LOC106595461 | other | downstream | 1088098 | 3521685 ~ 3532141 (-) |
| G1138568 | NA | other | upstream | 535178 | 5158165 ~ 5162954 (-) |
| G1138553 | LOC106592646 | other | upstream | 578068 | 5201055 ~ 5262513 (-) |
| LOC118936520 | NA | other | upstream | 594704 | 5216411 ~ 5244441 (-) |
| LOC118938515 | LOC106592948 | other | upstream | 1048473 | 5671437 ~ 5678473 (-) |
| LOC110512654 | LOC106592307 | other | upstream | 1421870 | 6044857 ~ 6058622 (-) |
