LOC118938536


Basic Information

Item Value
gene id LOC118938536
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 4737213 ~ 4741711 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005035755.1
ggaggcagagagagggacttTCCCTAGACAGACCTGACCCCCAGCCACAGAGAACACCGTCTGCAGCGAGAGAAGACCAAACTACTGAGCTCTACCTCAGAGATATCCAGGAGAGACCAGAACTAAAGACTCAGGACTAGGACCCAGACATCCAGGACCCAACACCTAGGACCCAGGGCTCTTTAACTAGGCCCAGGACTCTGACCCAAACCCAACACCCAGACCCAGGACTAGACCCAGACATCCAGGATCCTACACCTAGGACCCAGGGCTCTTTAACTAGGCCCAGGACTCTGACCCAGACATCCAACCCAGAACCAGGGAGAGACCAGGGTACTCTGACCCATAAAGGATCTAGGAGCGGGTTTTGTTACACAGGAACTCTCCATACCCAGCCATGCCTGCCCCTGGAGGAACAGATCCTAAGGGGGAGGATTTCTCCACTGCTATCCTGAAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005035755.1 True 459 mRNA 0.55 2 4737213 4741711

Neighbor

gene id symbol gene type direction distance location
LOC118938535 LOC106591275 coding downstream 114226 4620222 ~ 4622987 (-)
LOC118936518 LOC106606801 coding downstream 124259 4606354 ~ 4612954 (-)
LOC110519427 LOC106592376 coding downstream 399553 4325772 ~ 4337660 (-)
LOC118938151 LOC106592341 coding downstream 415934 4313122 ~ 4321279 (-)
LOC110485404 LOC106591939 coding downstream 424776 4293455 ~ 4312437 (-)
LOC118938155 LOC106564258 coding upstream 13367 4755078 ~ 4767260 (-)
LOC118936519 LOC106564260 coding upstream 28968 4770679 ~ 4796554 (-)
LOC110493400 as1la coding upstream 56048 4797759 ~ 4807623 (-)
LOC110510582 LOC106592158 coding upstream 73034 4814745 ~ 4838008 (-)
gcgrb LOC106591591 coding upstream 201418 4943129 ~ 5000791 (-)
G1138236 NA non-coding downstream 106350 4627712 ~ 4630863 (-)
G1138234 NA non-coding downstream 110880 4625803 ~ 4626333 (-)
G1138232 NA non-coding downstream 117034 4619495 ~ 4620179 (-)
G1138228 NA non-coding downstream 128330 4608103 ~ 4608883 (-)
G1138225 NA non-coding downstream 134897 4601829 ~ 4602316 (-)
G1138315 LOC100194703 non-coding upstream 6006 4747717 ~ 4750557 (-)
G1138320 NA non-coding upstream 14001 4755712 ~ 4758159 (-)
G1138316 NA non-coding upstream 26211 4767922 ~ 4770635 (-)
G1138331 NA non-coding upstream 63796 4805507 ~ 4805954 (-)
G1138340 NA non-coding upstream 82818 4824529 ~ 4825246 (-)
G1138151 LOC106606801 other downstream 315953 4394745 ~ 4421260 (-)
G1137672 LOC106595836 other downstream 971397 3765282 ~ 3765816 (-)
G1137666 NA other downstream 1003913 3731621 ~ 3733300 (-)
LOC110487308 LOC106595461 other downstream 1205089 3521685 ~ 3532141 (-)
G1138568 NA other upstream 416454 5158165 ~ 5162954 (-)
G1138553 LOC106592646 other upstream 459344 5201055 ~ 5262513 (-)
LOC118936520 NA other upstream 475980 5216411 ~ 5244441 (-)
LOC118938515 LOC106592948 other upstream 929749 5671437 ~ 5678473 (-)
LOC110512654 LOC106592307 other upstream 1303146 6044857 ~ 6058622 (-)

Expression


Co-expression Network