LOC110513279 (LOC105029740)


Basic Information

Item Value
gene id LOC110513279
gene name LOC105029740
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 5028078 ~ 5055105 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036939924.1
ATCCTCTCTGTAGCGTAGATTAGAGAAACCGGGGACTTTTTCAGTTTTGACGTTTGCAAAAACAACCTGCAGAAAATAAATTGTCGAGCGGCGACCTTTGAGTCTGTCTAGTTAGAGCCCTAGGAGGCAGTTCCTCAGCCCGGGGTGGCAATTGGCTGCGCGTGCACTCACTGCGACTCCCCTCTTGTGTCTCGCTCGATCCATTTCCTATCACGCGTTCTGTAAAAttgcctacacacacacgcacgatgTGGTTtgcgtgtgtatgcgtgcacCGGAACCCAAAGTCCGTCGGTGGCGTCGGCAAATTTGAAGATTAACGAGGTTATCTTCCATTCGACccgcggagagagagagagaggaccagaaaGCACAGACTTCTGCGCCGACCTGCTTGCGTGTCGAGGCGGAAAGGGAGCCTGGCTCTGGCCAGCTGCGTTGTTGGACTGGATCGAATTGGACTCAGCGAAGAGCAGTAGGACTATATAAAGACAAGAGGGGGAATATGAGCGATAAACGGATGTCGCGGTGGTATTTTGGGGGGCTCGCCTCCTGTGGGGCTGCCTGCTGCACCCATCCTCTGGAcctcatcaaagtcCACCTGCAGACCCAGCAGAAGGGGAAGATGGGGATGGTGAGCATGGCCATGCAGGTAGTGAAGAACGATGGAGCTCTGGCTTTGTACAACGGACTCAGCGCATCACTCTGCAGACAgatgTCCTATTCTCTAACTAGGTTTGCTATctatgagacagtcagagacatgtTGAGTAGCAGTAACCAGGGGCCCATGCCTTTCTACCAGAAGGTGCTGCTGGGGGCCTTCGGagGTTTTACTGGCGGGTTCATTGGTACTCCTGCAGACATGGTGAACGTCAGGATGCAGAATGATGTTAAACTTCCCCCAGAGCTGAGGAGAAActaCAAACATGCTGTGGACGGTCTCTTCAGGGTCTTCAGAGAAGAGGGGGTGAGGAAGTTGTTCTCAGGAGCCACCATGGCCTCCAGCAGAGGAGCTCTGGTCACCGTGGGACAGtTGGCATGTTATGACCAGGCTAAACAGCTGGTGCTGTCTTCAGGCTTCATGGGCGATAACATCCTCACACACTTCCTGTCTAGCTTCATCGCTggAGGCTGTGCTACGTTCCTGTGTCAGCCTCTAGATGTGATGAAGACCAGGTTGATGAACTCTAAAGGAGAATACTCAGGTGTGATACACTGTCTGAGAGTGACGGCTAAAGAGGGACCCATGGCCTTCTacaagGGTCTTGTTCCTGCAGGGATCCGTCTGATTCCTCACACGGTGCTCACCTTCATCTTCCTAGAGCAGCTCAAGAACAACTTCGGCATCGTCATCATCTCCTGAGCACGCTCCTTGACCTACGACCTTTACCCTCTAACCCCCTGTCCCCTGCAAACATCAACCAATCCCCTGTCACTGCCACAgtgcctcaccccccccccccccccccccccccatggcccTGAGCTGTCCAATCCCACAGAGAGGTGGTTGTAGGGATGGAATGTCTGCTATGCTATCCTACCCAGCCCTCTTTAACCTGCTCTGGAATCAACCAATCACCCGGGGAAAAGACTACGAACGAACTGCCTGCACCATCACAGCCTTGTCCACAGGAAGAGTTGTCATAGCAACGCCAGTCAAACCCTGCTGTGACATCATCTTCATGTCTCTGTCATCATCAATAGTGCCGTTCTCAATGGGGGCTGCGCCTCAAATcatacactattccctatgtagtgcactacttctgaaccTTAATCTGTAGTGCACTTAACATGaagctctggtcagaagtagtgcactacgtagggaacatAGTGCCACCTGAGTTCACTCCCTAAACGATGTTGATGTGTTTATACTGTAGCcttccaccaccatcatcatgtATCACCCAAACCTGTTCCATTCCACACCACACCAGTCCTCATGTATTACTAGCAGTGTACTAGTTGTAGTAGTATGTATTACTAGCGGTGTACTAGTTGTAGTAGTATGTATTACTAGCGGCCTACTAGTTGTAGTAGTATGTATTACTAGCAGTGTACTAGTTATAGTAGTATGTATTACTAGTAGTGTACTAGCTGTAGTAGTATGTATTACTAGCGGTGTACTAGCTGTAGTAGTATGTATTACTAGAGTGTACTAGCTGTAGTAGTATGTATTACTAGCagtgtagtagctgtagtagtgtgTATTACTAGCagtgtagtagctgtagtagtgtgTATTACTAGCagtgtagtagctgtagtagtgtgTATTACTAGCagtgtagtagctgtagtagtgtgTATTACTAGCagtgtagtagctgtagtagtatgTATTACTAGCAGTGTACTAGCTGTAGTAGTATGTATTACTAGCagtgtagtagctgtagtagtgtgTATTACTAGCagtgtagtagctgtagtagtgtgTATTACTAGCagtgtagtagctgtagtagtgtgTATTACTAGCagtgtagtagctgtagtagtgtgTATTACTAGCAGTGTAGCAGTATGTATTACTAGCGGTGTACTAGCTGTAGTAGTATGCATTACTAGCAGTGTACTAGTTGTAGTAGTATGTATTAGTATAATGTATTACTGGTATGACTGTAAATCACTACCACATTGTGGTTCTAACTGAAACCATCATAGATACTGTCACATCGGGGGGTGACGATGACAACGGGCCCTCTTCCTGTTCATAACACTGTAacagcggcaggtagcctcgcgG

Function

NR:

description
mitochondrial dicarboxylate carrier-like

GO:

id name namespace
GO:0006839 mitochondrial transport biological_process
GO:0031966 mitochondrial membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K13577 SLC25A10, DIC; solute carrier family 25 (mitochondrial dicarboxylate transporter), member 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036939924.1 True 2761 mRNA 0.49 11 5028078 5055105

Neighbor

gene id symbol gene type direction distance location
gcgrb LOC106591591 coding downstream 27287 4943129 ~ 5000791 (-)
LOC110510582 LOC106592158 coding downstream 190070 4814745 ~ 4838008 (-)
LOC110493400 as1la coding downstream 220455 4797759 ~ 4807623 (-)
LOC118936519 LOC106564260 coding downstream 231524 4770679 ~ 4796554 (-)
LOC118938155 LOC106564258 coding downstream 260818 4755078 ~ 4767260 (-)
LOC110513280 LOC106564244 coding upstream 3346 5058451 ~ 5061519 (-)
LOC110485437 NA coding upstream 37510 5092615 ~ 5094443 (-)
LOC118938158 LOC106592452 coding upstream 57726 5112831 ~ 5115196 (-)
LOC110485443 LOC106592430 coding upstream 73119 5128224 ~ 5141579 (-)
LOC110485440 LOC106597237 coding upstream 83479 5138584 ~ 5141623 (-)
G1138554 NA non-coding downstream 312 5026006 ~ 5027766 (-)
G1138558 NA non-coding downstream 5148 5022616 ~ 5022930 (-)
G1138595 NA non-coding downstream 7728 5020146 ~ 5020350 (-)
G1138593 NA non-coding downstream 11035 5016821 ~ 5017043 (-)
G1138579 NA non-coding downstream 14691 4983797 ~ 5013387 (-)
G1138607 NA non-coding upstream 9456 5064561 ~ 5065005 (-)
G1138601 NA non-coding upstream 10766 5065871 ~ 5071930 (-)
G1138609 NA non-coding upstream 18346 5073451 ~ 5073730 (-)
G1138610 NA non-coding upstream 19426 5074531 ~ 5074974 (-)
G1138611 NA non-coding upstream 21463 5076568 ~ 5077162 (-)
G1138232 NA other downstream 408214 4619495 ~ 4620179 (-)
G1138151 LOC106606801 other downstream 606818 4394745 ~ 4421260 (-)
G1137672 LOC106595836 other downstream 1262262 3765282 ~ 3765816 (-)
G1137666 NA other downstream 1294778 3731621 ~ 3733300 (-)
LOC110487308 LOC106595461 other downstream 1495954 3521685 ~ 3532141 (-)
G1138568 NA other upstream 103060 5158165 ~ 5162954 (-)
G1138553 LOC106592646 other upstream 145950 5201055 ~ 5262513 (-)
LOC118936520 NA other upstream 162586 5216411 ~ 5244441 (-)
LOC118938515 LOC106592948 other upstream 616355 5671437 ~ 5678473 (-)
LOC110512654 LOC106592307 other upstream 989752 6044857 ~ 6058622 (-)

Expression


Co-expression Network