LOC118938161 (LOC106592320)


Basic Information

Item Value
gene id LOC118938161
gene name LOC106592320
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 5168329 ~ 5177917 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036939933.1
AAATGAAACTTAACAGAATGTACCATGAGACACGTTGGGTGCTTTAGTGTCGCATGAGTTTTAGACCATTCTATTGGTCCTTAAGGTCCTGGCTATGCAAAACCAGCAGGCCCACTGCTTCAGCTCTCTCTGTGACAACAGCAGACAACAATATACAGATCTGTGCAACACTAAAATTTTTGATTGGCTGCAGTTTTAGTAATGGAACGAGGAAGAGGAAGGATTCTGTTCCTGTTGACACTCTGTTTGCAAGACTTCACTGGTGAAttccaagTTTCAGGGCAGCCCTCTAACCTGAGGATAGTTCTGGTGGGGAAGACTGGATCAGGGAAGAGTGCAACAGGAAACACCATCCTGGGGAGAGAGGTGTTTAAAGCGGGGGCTTCTCCAGTGTCTGTGACTGCACAGAGTGAGAAACAGAGTGGAGTGGTGGATGGGAGGAAGATTGATGTCATCGACACCCCGGGACTCTATGATACAACAATGTCTAAAGAAGAGATAAAAAGTGAAATAGTCAGGTGTATAGAAATGTCAGTCCCAGGACCTCACGCCTTCCTGCTGGTGATCAGACTGGGGAGGTTTacaaaggaggagaggaacactgTTAAGTGGATCCAGAAGAACTTTGGAGAAGAAGCCTCAATGTACACCATCTTGCTGTTCACACATGGAGATCAACTGGAGGGGAAATCAGTGGAAGAGTTTCTGGCTGAGAGCAAAGAGTTACGGAAACTCATCAATATCTGTGGGGGCAGATATCACTCCCTAATCAATGACAAGAGAGAAGACAACACTCAGGTCCCAGAGCTGCTGAAGAAGATAGAGGAGATGGTGAAGAAGAATGGAGGACAACACTACACCAACGAGATGTACCAGGAGGCCCAGATGAAgattgaagaggaggaggagaggaagaaacagGAGAagaaggaaagagacagagagaggagacaggatgaggaagaaagaagaagaagagaagagaaattgAATGAGTGCAAGTGGTCAGCGTTTGCCAGTATGGCTGCATTGGGGTTGGGAGCCATGTTCAGCTCTCCATGGTCGTTAACAGCAGGGGCTACATTAGCTGCTGTTAAAGGTTATGAATGCATGGGCACCTATTTCACCTCAGAAGACCAGGAGAAATAAGATTTCCACatccaccatctcagattgttttgAAATTAAGATGAATTATTGTGTTATATAATATAAATAGAAtgtgatctctgagaaattaataaataaatacaatttattgTGCC

Function

NR:

description
GTPase IMAP family member 7-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036939933.1 True 1265 mRNA 0.45 3 5168329 5177917

Neighbor

gene id symbol gene type direction distance location
LOC118938159 LOC106592320 coding downstream 13229 5149240 ~ 5155100 (-)
LOC110485440 LOC106597237 coding downstream 26706 5138584 ~ 5141623 (-)
LOC110485443 LOC106592430 coding downstream 26750 5128224 ~ 5141579 (-)
LOC118938158 LOC106592452 coding downstream 53133 5112831 ~ 5115196 (-)
LOC110485437 NA coding downstream 73978 5092615 ~ 5094443 (-)
LOC118938162 LOC106592646 coding upstream 22562 5200479 ~ 5211509 (-)
LOC118936520 NA coding upstream 38494 5216411 ~ 5244441 (-)
LOC110516762 LOC106592646 coding upstream 67529 5245446 ~ 5266487 (-)
LOC110485445 LOC106564237 coding upstream 101029 5278946 ~ 5280863 (-)
LOC110517601 tmed1 coding upstream 407137 5585054 ~ 5595560 (-)
G1138620 NA non-coding downstream 21693 5146263 ~ 5146636 (-)
G1138619 NA non-coding downstream 22179 5144597 ~ 5146150 (-)
G1138574 NA non-coding downstream 34471 5133317 ~ 5133858 (-)
G1138566 NA non-coding downstream 43505 5112352 ~ 5124824 (-)
G1138628 NA non-coding upstream 44839 5222756 ~ 5228090 (-)
G1138632 NA non-coding upstream 72345 5250262 ~ 5251136 (-)
G1138571 NA non-coding upstream 80180 5258097 ~ 5258533 (-)
G1138634 NA non-coding upstream 95467 5273384 ~ 5273692 (-)
G1138637 NA non-coding upstream 99132 5277049 ~ 5277273 (-)
G1138568 NA other downstream 5375 5158165 ~ 5162954 (-)
G1138232 NA other downstream 548465 4619495 ~ 4620179 (-)
G1138151 LOC106606801 other downstream 747069 4394745 ~ 4421260 (-)
G1137672 LOC106595836 other downstream 1402513 3765282 ~ 3765816 (-)
G1137666 NA other downstream 1435029 3731621 ~ 3733300 (-)
G1138553 LOC106592646 other upstream 23138 5201055 ~ 5262513 (-)
LOC118938515 LOC106592948 other upstream 493543 5671437 ~ 5678473 (-)
LOC110512654 LOC106592307 other upstream 866940 6044857 ~ 6058622 (-)
G1139916 NA other upstream 914442 6092359 ~ 6093516 (-)

Expression


Co-expression Network