nxnl1 (LOC106592756)


Basic Information

Item Value
gene id nxnl1
gene name LOC106592756
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 5794309 ~ 5799274 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036939994.1
ctctctctgtctctgtctctgtctctgtctctgtttctctctctctctgtatctttctctctctctgtctctcacacaggTGATATTCTCAGTGTCTGACTCACCCTACTCTTCTGACCCAGCTAATCTCCCACtctagggggaggagaggggaggcgacagggagagagacacggtgcggtgacagagagagagagagatagaaaaacagagagagagagagggagggaaaacacTGGGAAGAGAAGCAGACGAATAAAGAATGAAGGAATAAAGCGGAAataagggagagagtgagggagagagagagggagggaaacaacAGAGGAACAGACAagataaagagagatgaagaAAAAATCGTAACAGGAGCGGTTTTTGGACAACCTgcgagaaagaaaagaaagaaagaggaggagcttaaggagacggagagagagaagactacagactacagtctGAAGTAGACCATGGTAGATTTGTTCCTAGGTCGTTCACTAGTATGTAACAACAGAGACCGTGTTGAGTACGATACGGAACGGGAGGTCATCCTCCGTCTCCAGAACCGGATCCTGCTCCTGTTCTTCGGTTCAGTAGACAGCCAACGGTGCCAGGAGTTTGTCCCCACACttaagGACTTCTTCAAGCGTCTAACAGATGAGTTCTACGTGGAACGCTCCGCCCAGTTGGTCCTTCTGTACATCAGCCTGGACCAATCAGAGGAGCAGCTGGAGAACCTCCTCAAAGAGCTGCCCAAGAAATGCCTGTTCCTGACCCACAATGACCCCTATCGCAGagagCTGGAGTCTATGTTTGAGGTGGAGGATGTACCGAGGGTGGTGGTGCTGCGTCcagactgttctgttctatctccCAACGCTGTCTCTGAGATAAGCAGCCTCGGAACCAACTGCTTCCACaactggcagGAATCAGCTGAGCTTATCGACAGGAACTTCATGCTGAACGAGGAGTTTGACGACAAAAAGATGCGGAGCGTCACCGACCCGATACGCCGCCTCAAATACaaggtgaagaagaagaagaggaggaggcagtgggggtgggggggtggcgGAGccggagaggatgaggaggacgaggaggatgag

Function

NR:

description
PREDICTED: nucleoredoxin-like protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036939994.1 True 1112 mRNA 0.51 5 5794309 5799274

Neighbor

gene id symbol gene type direction distance location
LOC110485432 LOC106593320 coding downstream 10920 5756733 ~ 5783389 (-)
LOC110487505 LOC106593267 coding downstream 38490 5679164 ~ 5756340 (-)
LOC118938515 LOC106592948 coding downstream 115836 5671437 ~ 5678473 (-)
LOC110516670 LOC106592431 coding downstream 164463 5626611 ~ 5629846 (-)
LOC110517601 tmed1 coding downstream 198749 5585054 ~ 5595560 (-)
LOC110519495 LOC106566240 coding upstream 29126 5828400 ~ 6076863 (-)
LOC110516892 LOC106585402 coding upstream 213885 6013159 ~ 6033506 (-)
LOC110512397 LOC106592307 coding upstream 235084 6034358 ~ 6132682 (-)
LOC110512654 LOC106592307 coding upstream 246522 6044857 ~ 6058622 (-)
LOC110512959 LOC106592278 coding upstream 352923 6152197 ~ 6167475 (-)
G1139823 NA non-coding downstream 26332 5767237 ~ 5767977 (-)
G1139818 NA non-coding downstream 47142 5745674 ~ 5747167 (-)
G1139746 NA non-coding downstream 123023 5669870 ~ 5671286 (-)
G1139748 NA non-coding downstream 124948 5669084 ~ 5669361 (-)
G1139829 NA non-coding upstream 3381 5802655 ~ 5802866 (-)
G1139840 NA non-coding upstream 23766 5823040 ~ 5824694 (-)
G1139846 NA non-coding upstream 83991 5883265 ~ 6013720 (-)
G1139887 NA non-coding upstream 169439 5968713 ~ 6017737 (-)
G1139888 NA non-coding upstream 170543 5969817 ~ 6019166 (-)
G1138553 LOC106592646 other downstream 531796 5201055 ~ 5262513 (-)
LOC118936520 NA other downstream 549905 5216411 ~ 5244441 (-)
G1138568 NA other downstream 631355 5158165 ~ 5162954 (-)
G1138232 NA other downstream 1174445 4619495 ~ 4620179 (-)
G1139916 NA other upstream 293085 6092359 ~ 6093516 (-)
LOC110485426 LOC106594040 other upstream 807045 6600141 ~ 6649233 (-)
LOC118938170 LOC106564207 other upstream 899108 6698319 ~ 6717102 (-)
LOC110510388 LOC106592846 other upstream 979974 6779248 ~ 6831814 (-)

Expression


Co-expression Network