LOC118938177 (LOC106591664)


Basic Information

Item Value
gene id LOC118938177
gene name LOC106591664
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 7530063 ~ 7564833 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036940091.1
TCTAGATGTTGTGTTGGAGATGGATCCTACATctgtgtcagagagggagaatgtCACACTGAGATGTAGAACCAAATGTACACTGGACCCCATCACAGAGTACAGTTGGTATAAGAATGGACAGCCTATACCAAACAGCAacacctcctctcctgtctacATCCTATTCTCAGTCAGCAGTGAGGATACAGGCAGATACTCCTGTTCTGTAGAAGGACATGAGGATCTCCCCTCTGCTGAAGAGACTCTCACTGTCACATATGGTCCAAGGAAcacctcagtgtcagtcagtccctctggtgacatagtggagggcagttcagtgactctgacctgcagcagtgatgcAAACCCACCTGTGGACAAATACACCTGGTACAAGAAGAACGTAACCTCACCAAAAGCATCAGGACAGAGTTACAGCATCACTAACATCATctctgaggacagaggagaatatTACTGTGAGGCCCAGAATGGAAGAGGATCTATGAACTCTACAGCTCTGATGATCATTGTAGCAGAGAAACAAACCTCAGTTCTAACTGCAGCTGTAGGAATCATAGTGGTTGTTCTGGGTGTCATACTGGCTTCATGTCTCTCTGGACTCATGTGGTTCAGGAAGAAGGTCTCCAAAACCACCTCTGACACAAGACACACGGCAGGCAATGGACAGggaGACTCTAGTCCAGTGTATGACAACATCTCAGGCATGGCCTTCACCCCTTCTGCAGCACAGACAGCGGCCACCGTCGACCAAGATGACATTCACTTCGCCAGCTTCCACGTCTCTCACTCCAAAAACCAGGAAGTGCCTCTGTACTCCACCGTCCAACTGCTTCAACCCCAGAAAGAGGATGAGGATGTCCAGTACGCTGCTGTGAATTTCAACCTCCCCAGTGCTGCCACCTGGTCCACGGTGGAACAAGCAGCTGAGGAGGATCCCTCTGTTCTCTACAGTACagtcaacaaacccagaaccaagaagacctgaacacaataAACCCAGAACCCagaagacctgaacacaataaacccagaaccaagaagacctgataaacccagaaccaagaactgAAAACAACAAACCCAAAACCAAGAACTgaaaacaacaaacccagaaccaagaactgAAAACAACAAACCCAAAACCAAGAAGACCTTGTATATCTGGGCCCGTATATTATAACTAAgtggtataattaagcaataaggtcaGAGGCGGTGTGGTATATTGGCCTATATACTGTACCACGGCTAATGACTGTTGTTCtgcacaacgcagagtgccttgatacagcccttagccgtggtatattgaccatatactaCAAGCCCGAGGGccgtattgctattataaactggttaccaacataaataGAAAGTAAACAAATATTTTGGTGTCATACCAGTGTTCTATTGTCTGAAATACTGTATGTGAAATGAAATGCttattcagccaatcagcatccaggacctAAACTACCTGGTTTATAATAGTATCtagtaatatacagtgcattcagaaagtattcagaccccttgactttttccacattttgttatgttacagccttattctaaaattgaataaatatttttttcccctcatcaatctacacaca

Function

NR:

description
PREDICTED: B-cell receptor CD22-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036940091.1 True 1625 mRNA 0.45 7 7530063 7564833

Neighbor

gene id symbol gene type direction distance location
LOC118938174 LOC106592614 coding downstream 33283 7443617 ~ 7496780 (-)
LOC118938180 NA coding downstream 93961 7434486 ~ 7436102 (-)
LOC118938520 LOC106596103 coding downstream 107036 7413426 ~ 7423027 (-)
LOC110519431 LOC106596103 coding downstream 126305 7316314 ~ 7403758 (-)
LOC118938178 LOC106601621 coding upstream 2114 7566947 ~ 7567941 (-)
LOC118938521 NA coding upstream 13841 7578674 ~ 7699845 (-)
LOC110494997 LOC106598058 coding upstream 60319 7625152 ~ 7671859 (-)
LOC118938175 LOC106564328 coding upstream 107939 7672772 ~ 7698366 (-)
LOC118938176 LOC106592614 coding upstream 118133 7682966 ~ 7689906 (-)
G1140458 NA non-coding downstream 19568 7509233 ~ 7510495 (-)
LOC110493310 LOC106591489 non-coding downstream 25364 7490185 ~ 7534632 (-)
G1140448 NA non-coding downstream 68960 7458227 ~ 7461103 (-)
G1140370 LOC106591489 non-coding downstream 78394 7415596 ~ 7451669 (-)
G1140410 NA non-coding downstream 97836 7327649 ~ 7432227 (-)
G1140473 NA non-coding upstream 5018 7569851 ~ 7570855 (-)
G1140486 NA non-coding upstream 43731 7608564 ~ 7642221 (-)
G1140375 NA non-coding upstream 83280 7648113 ~ 7697970 (-)
G1140368 LOC106591490 non-coding upstream 94864 7659697 ~ 7730493 (-)
G1140343 NA other downstream 283413 7245712 ~ 7246650 (-)
G1140323 NA other downstream 337820 7190696 ~ 7192243 (-)
LOC110513509 LOC106593154 other downstream 448608 6923538 ~ 7083659 (-)
LOC110485610 hoga1 other upstream 494113 8058941 ~ 8080347 (-)
G1141490 NA other upstream 766302 8331135 ~ 8332518 (-)
G1141517 NA other upstream 861780 8426613 ~ 8452319 (-)
G1141579 NA other upstream 1026132 8590965 ~ 8592898 (-)

Expression


Co-expression Network