LOC118938522 (LOC106591490)


Basic Information

Item Value
gene id LOC118938522
gene name LOC106591490
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 7734045 ~ 7736476 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036942570.1
CCCTGCTACACCAGTAAGTTGACTCACTGTACAATACCTCTCCCCTTCACTCTACTGCAGGGTGGGAGATAAAACAATGGTCTTGAGAACAGCAGGAAGTGTGTTGGgggtctttctctggtctgtagcagTTGTACTGGGTCAGGATGGCTGGAGTGTTACATACACCCCTCAGAGTATCTGTACCTTGAAGGGGTCAACAGTGGAGATGTCCTGCTCTTACACATATCCTAGTGGTTATATCGTCACATCAACCTTCTGGTTCACTAAAAATGATGCTGAGGGGAATCCTGTTAGTCTGAGTGATGACGCAGACTACAAAGCTCGTGTGACGTATCATAAAGATAACAAGAATGACTGCACTCTGAGAAtcacagacctgagagagagtGACTCAGCTACGTACAAGTTCAGATTTATAACAGATCAGACTGGAGGGAGAtttactggcagtcctggagtcactctgtctgtcacagGTctgcaggtgaaggtgactcCTTATTCAGTTGTATCAGCGTGGAAGACACTGACTTGCACCACCTGTGTTCTGACTGGtaaccccacctacatctggtacaagaacggacagATAGTAACGGACAACACTTCTCCCTATTCAGTCTACCCTGATGCTGCAGACAGCTACTCCTGTGCTGTAAAATCCAATGAGGATCTCCACACTCCTGCAGTGTGTGTTCAGGATCAGAGCTGCAACAGAGTAACTTATACTGACAATAGTATCTGTGCCTTGAAGGGGTCATCAGTGGACATATCCTGTACTTATTCCAGTTATCATCCGATCAAAACAACATTCTGGTTTAGAAGTGATAAGTCGGCCCCTGAGGACCTAACCAGAGACCCAGAGTATGCAGGTCGGGCCCTGGAGAGCCTTCCCTCCATCCTGAGAATCACGGATCTGAGAGAGAGCGACTCAGCTGAGTATAAATTCAGATTCAACACACAGATCTCAGGATGGGGGTACAGCTTCCCTGGAACAACTCTGTCGGTCACAGcattggggcggcaggtagcctag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036942570.1 True 1039 mRNA 0.48 6 7734045 7736476

Neighbor

gene id symbol gene type direction distance location
LOC110493317 LOC106591490 coding downstream 172 7714373 ~ 7733873 (-)
LOC118938175 LOC106564328 coding downstream 35679 7672772 ~ 7698366 (-)
LOC118938176 LOC106592614 coding downstream 44139 7682966 ~ 7689906 (-)
LOC110494997 LOC106598058 coding downstream 62186 7625152 ~ 7671859 (-)
LOC118938521 NA coding downstream 79871 7578674 ~ 7699845 (-)
LOC118938183 LOC106591333 coding upstream 189457 7925933 ~ 8006473 (-)
LOC110485610 hoga1 coding upstream 322465 8058941 ~ 8080347 (-)
LOC110518530 LOC106591329 coding upstream 362033 8098509 ~ 8119143 (-)
LOC110485578 LOC105012087 coding upstream 444005 8180481 ~ 8201020 (-)
LOC110485582 LOC106591223 coding upstream 488822 8225298 ~ 8262940 (-)
G1140368 LOC106591490 non-coding downstream 3552 7659697 ~ 7730493 (-)
G1140504 NA non-coding downstream 23178 7696547 ~ 7710867 (-)
G1140375 NA non-coding downstream 36075 7648113 ~ 7697970 (-)
G1140499 NA non-coding downstream 61932 7665917 ~ 7672113 (-)
G1140526 NA non-coding upstream 14318 7750794 ~ 7751003 (-)
G1140531 NA non-coding upstream 20461 7756937 ~ 7761076 (-)
G1140558 NA non-coding upstream 92647 7829123 ~ 7829555 (-)
G1140559 NA non-coding upstream 96895 7833371 ~ 7833723 (-)
G1140560 NA non-coding upstream 100000 7836476 ~ 7836694 (-)
G1140367 LOC106601621 other downstream 38299 7409260 ~ 7695746 (-)
LOC110493310 LOC106591489 other downstream 229346 7490185 ~ 7534632 (-)
G1140343 NA other downstream 487395 7245712 ~ 7246650 (-)
G1140323 NA other downstream 541802 7190696 ~ 7192243 (-)
G1141490 NA other upstream 594659 8331135 ~ 8332518 (-)
G1141517 NA other upstream 690137 8426613 ~ 8452319 (-)
G1141579 NA other upstream 854489 8590965 ~ 8592898 (-)
ncf4 p40phox other upstream 923083 8655106 ~ 8696718 (-)

Expression


Co-expression Network