Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118938189 |
| gene name | LOC106591430 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 8570729 ~ 8594285 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: dynein heavy chain 6, axonemal-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036940126.1 | False | 7178 | mRNA | 0.48 | 8 | 8570729 | 8594285 |
| XM_036940127.1 | False | 7175 | mRNA | 0.48 | 8 | 8570729 | 8594285 |
| TU1300849 | False | 872 | TUCP | 0.58 | 5 | 8571003 | 8587189 |
| TU1300848 | True | 2781 | lncRNA | 0.44 | 2 | 8590946 | 8594278 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487249 | LOC106591278 | coding | upstream | 48253 | 8512375 ~ 8522476 (+) |
| LOC118938523 | LOC106591278 | coding | upstream | 65334 | 8502363 ~ 8505395 (+) |
| LOC118938187 | LOC106591407 | coding | upstream | 94878 | 8474408 ~ 8475851 (+) |
| LOC110518697 | LOC106598058 | coding | upstream | 99850 | 8462575 ~ 8470879 (+) |
| LOC118938185 | LOC106591409 | coding | upstream | 115474 | 8411386 ~ 8455255 (+) |
| LOC118938190 | LOC106591443 | coding | downstream | 72371 | 8666617 ~ 8729215 (+) |
| cbx6a | cbx6 | coding | downstream | 196396 | 8790681 ~ 8810954 (+) |
| LOC110485593 | LOC108261343 | coding | downstream | 224242 | 8818527 ~ 8821975 (+) |
| LOC110487255 | LOC106591397 | coding | downstream | 233952 | 8828237 ~ 8840946 (+) |
| LOC110517299 | LOC106564396 | coding | downstream | 413206 | 9007491 ~ 9026819 (+) |
| G1140926 | NA | non-coding | upstream | 28419 | 8541109 ~ 8542310 (+) |
| G1140924 | NA | non-coding | upstream | 46191 | 8523700 ~ 8524538 (+) |
| G1140908 | NA | non-coding | upstream | 64210 | 8473468 ~ 8506519 (+) |
| G1140909 | NA | non-coding | upstream | 89774 | 8476068 ~ 8480955 (+) |
| G1140904 | NA | non-coding | upstream | 140855 | 8403790 ~ 8429874 (+) |
| G1140950 | NA | non-coding | downstream | 7566 | 8601851 ~ 8603693 (+) |
| G1140951 | NA | non-coding | downstream | 13133 | 8607418 ~ 8612406 (+) |
| G1140939 | p40phox | non-coding | downstream | 42160 | 8636445 ~ 8658005 (+) |
| G1140964 | NA | non-coding | downstream | 118877 | 8713162 ~ 8713675 (+) |
| G1140682 | NA | other | upstream | 435907 | 8134000 ~ 8134822 (+) |
| LOC110485616 | LOC106591151 | other | upstream | 741684 | 7762808 ~ 7888033 (+) |
| LOC118938182 | LOC106591493 | other | upstream | 821351 | 7746401 ~ 7761076 (+) |
| G1139317 | NA | other | upstream | 1043572 | 7525592 ~ 7527157 (+) |
| G1139553 | NA | other | upstream | 1068448 | 7475374 ~ 7502281 (+) |
| G1140953 | NA | other | downstream | 46863 | 8641148 ~ 8694875 (+) |
| G1141017 | LOC106564394 | other | downstream | 454934 | 9049219 ~ 9095480 (+) |
| LOC118936367 | LOC106564430 | other | downstream | 950858 | 9545143 ~ 9562471 (+) |
| LOC118938188 | NA | coding | upstream | 168970 | 8419348 ~ 8421976 (+) |
| G1140947 | NA | non-coding | upstream | 4114 | 8586183 ~ 8586832 (+) |
| G1140946 | NA | non-coding | upstream | 6438 | 8581266 ~ 8584508 (+) |
| LOC118938189 | LOC106591430 | other | upstream | 3757 | 8570729 ~ 8594285 (+) |
