ncf4 (p40phox)


Basic Information

Item Value
gene id ncf4
gene name p40phox
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 8655106 ~ 8696718 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001124505.1
GGTCTCCATCAACATGTCGTCGCTGCCCAAGCAACTACGAGACGAGAGtgatTTTGACCAGCTTCCACACGACATTCCCATCAGTGCCACCATCGCAGACATCGAGGAGAAAAAGGGCTTCATCGACTATTATCGTTTTGTGATAGAGGTAAGGACCAGAGGTGGTAGTAAGTACCTGATCTACCGGAGGTACAGCCAGTTCTTCAACCTGCACAGTGACCTGGAGCTGAAGCATTCACCTGGAGACCAGGGCACATCTGGACCTAACACCTGCAGGCTGCCCACCCTGCCTgGTAAAGTGTTCATTGGCAATAAGAAGGAGATTGCAGAGAATAGAATTCCAGAACTCAACACTTATATGAAGAGATTGCTGGGCCTGCCTACCTGGGTTCTATTGGATGACGACATCAGGATGTTTTTCTACCAGACTGAGTCAGACAGTCAGCACCAACCACGAGCCCTGCGTCGCCTCCGACCCCCTACACGTAGGGTgAAGACAGTCAAAACCAACCAGACAGATGTCTTCTCCTCCCCCAGAGCTGAGGTGGTCTTCGACTTCAGTGGGAGTGGACGACTGGAGCTGAGTATGAAAGCTGGAGAGGTGATCTTCCTTCTGAGGAGAGTTAACACAGACTGGCTGGAGggcacgGTGAGCAATCGAACAGGTATCTTCCCAGAATCCTTTGTGAAGATCATTAAGCCCCTCCCAGAGAGTGACTCTGATGGCGAGAGCGGTGGCGCTTCAGGTAAAGGGGCGGGGTCTTACAGCTGCCTGCGCTGCTACCTGCTCACACCCCAGGGCGTCGACACCAGGGATGTGTGTGTTGAAGAAGATATCTCCACCCAGCCATCATACAAAGAACTATTGGCACGCATGAGAGATGTGTTCAAGGTGGATGGCAACATCGCCCTGAACTACCGTGACCCCGAGGGTGACCTGGTGCGTCTCCTTGACGACGGGGACGTGGCGCTGATGGTGGCCGATGGGCGGggtcaaaggtcaaaggtcaagaGGCCTGTCAATCAGTTTCCGTGGGAACTGCATGTTACCGCGGCCTCTGACCTGTCTGTGTATAATACTGAGATAtaaagacagggagatggaggttTTCACATGTTTCTGTACTCGCTGAAGAGAGGCCATTTTGTGTTTGCTTCAGTGTATGCACGCTTGCAGGTGCACCTGTCTGTCCATGCCCTTGTGCGTGTGAGTCTCGCCAGCTTGCATCTGTAATCCACTGCAAACCTGCATGTAGTAGTCCGGACTGAGACCCAGTGACAGGGTGACAGACTTTAATTAAGGGGACAGACGCTGGATTGTAACACATTACAGAAGTTAGTCTGATTGAGCAATGTGAATGCAACCTAAAAGGCACACTaggccctacatagtgcactacttttcaccagacgCCCCggtcaaaatgagtgcactatatagggaacagggtgccattagggatgacACCTTAGTCACATTCATTAGTATGTCTGTGTTTGGTGGCTTTAAACGTGTAACATTTCACCTGTACTGTTGAGTAAATGTTAATATAAGGACATTTAA
>TU1301694
GAGCCCGTCTCCCTGACTCACACCAGtgtcctgttctctctttctctgtactcCTTTAGggatccctctttctttctctcatcccTCGCTCCTGGCACTTGTTCCCTCTTGTCTTCTGCTGATTGctgtcccgttctctctctctctctctcacactcacttcATCATCAGACAAGTAAAATGAGTCACTCTTACCTGTTCGGTTTCTCAGtcttctctctttgtctgtctctctttctctccctttctctcggtTGATCCTGGTCCGCTGCCTGCTGCGGGCGTGTTTGTGTTCTCCtccgtgtgtgtgttctcctccgtgtgtgtgtgtgtgtggttcccagGTGGTCTTCGACTTCAGTGGGAGTGGACGACTGGAGCTGAGTATGAAAGCTGGAGAGGTGATCTTCCTTCTGAGGAGAGTTAACACAGACTGGCTGGAGggcacgGTGAGCAATCGAACAGGTATCTTCCCAGAATCCTTTGTGAAGATCATTAAGCCCCTCCCAGAGAGTGACTCTGATGGCGAGAGCGGTGGCGCTTCAGGTAAAGGGGCGGGGTCTTACAGCTGCCTGCGCTGCTACCTGCTCACACCCCAGGGCGTCGACACCAGGGATGTGTGTGTTGAAGAAGATATCTCCACCCAGCCATCATACAAAGAACTATTGGCACGCATGAGGTAAGATACCAGACACATCCCACTGCTGAATCAACTCCACTCTTCACTACATATCTGATATTCTCCTCTTCACTACATATCTGATATTCTCCTCTTCTCTACATATCTGTTACTCATCTGATATTCTCCTCTTCACTACATATCTGTTACTCAGCTGATATTCTCCTCTTCACTACATATCTGTTACTCAGCTGATATTCTCCTCTTCACTACATATCTGATATTCTCCTCTTCTCTACATATCTGATATTCTCCTCTTCACTACATATCTGTTACTCAGCTGATATTCTCCTCTTCACTACATATCTGTTACTCAGCTGATATTCTCCTCTCCATTGAAATTTCCCCAGGTCAATAAGGATGTGCTTTATTGTCCACAGTACACACTATAACACTACCACAGTACACACTATAACACTACCACTCTACACACTATAACACTACCACAGTACACACTATAACACTACCACAGTACACACTATAACACTACCACAGTACACACTATAACACTACCACAGTACACACTATAACACTACCACAGTACACACTATAACACTACCACAGTACACACTATAACACTACCACAGTACACACTATAACACTACCACAGTtcaaactataacactataacactaccaCAGTACACACTATAACCAGACTCATATAGTCAGTTCCGCACATCTAGTGGCCCAGTTTATCATCTCTCATTATTATCTTGTCAACGAGATAAAACTCACCTCAACTGTAAAAGCAAAACAAGAATAAATCGAATTTCATTaaaggcacgcacgcacgcatgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacttccattaAACATTCACCAATGCCCCGGGGCCTAGAAATCTACCCACAATGCATAAGC

Function

symbol description
p40phox neutrophil cytosolic factor 4

NR:

description
neutrophil cytosol factor 4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001124505.1 False 1564 mRNA 0.51 10 8655106 8696718
TU1301694 True 1595 TUCP 0.45 3 8659559 8667096

Neighbor

gene id symbol gene type direction distance location
atpv0e2 va0e2 coding downstream 385416 8265675 ~ 8269763 (-)
LOC110485582 LOC106591223 coding downstream 392166 8225298 ~ 8262940 (-)
LOC110485578 LOC105012087 coding downstream 454086 8180481 ~ 8201020 (-)
LOC110518530 LOC106591329 coding downstream 535963 8098509 ~ 8119143 (-)
LOC110485610 hoga1 coding downstream 574759 8058941 ~ 8080347 (-)
LOC110515367 LOC106591437 coding upstream 32505 8729223 ~ 8738426 (-)
LOC110515366 pla2g6 coding upstream 42017 8738735 ~ 8787152 (-)
LOC118938524 LOC106590932 coding upstream 173303 8870021 ~ 8872667 (-)
LOC118938192 NA coding upstream 177316 8874034 ~ 8878068 (-)
LOC118938525 LOC106590989 coding upstream 189277 8885995 ~ 8888699 (-)
G1141589 NA non-coding downstream 34178 8620658 ~ 8620928 (-)
G1141588 NA non-coding downstream 34887 8619915 ~ 8620219 (-)
G1141582 NA non-coding downstream 42774 8607505 ~ 8612332 (-)
G1141580 NA non-coding downstream 55416 8599396 ~ 8599690 (-)
G1141459 LOC106591407 non-coding downstream 132382 8329090 ~ 8522724 (-)
G1141611 NA non-coding upstream 14237 8710955 ~ 8711316 (-)
G1141612 NA non-coding upstream 16550 8713268 ~ 8725202 (-)
G1141618 NA non-coding upstream 50709 8747427 ~ 8747733 (-)
G1141621 NA non-coding upstream 60207 8756925 ~ 8762078 (-)
G1141642 LOC106591467 non-coding upstream 114914 8811632 ~ 8816616 (-)
G1141579 NA other downstream 62208 8590965 ~ 8592898 (-)
G1141517 NA other downstream 202787 8426613 ~ 8452319 (-)
G1141490 NA other downstream 322588 8331135 ~ 8332518 (-)
G1140367 LOC106601621 other downstream 959360 7409260 ~ 7695746 (-)
G1141636 cbx6 other upstream 97139 8793857 ~ 8797212 (-)
LOC110494947 NA other upstream 263589 8960307 ~ 8972481 (-)
G1141790 NA other upstream 518422 9215140 ~ 9216298 (-)
LOC110485597 LOC106590780 other upstream 661361 9356000 ~ 9385805 (-)
G1141591 NA non-coding upstream 265 8667361 ~ 8668046 (-)
G1141592 NA non-coding upstream 2763 8669859 ~ 8671619 (-)
G1141594 NA non-coding upstream 9515 8676611 ~ 8676864 (-)
G1140368 LOC106591490 other downstream 999238 7659697 ~ 7730493 (-)

Expression


Co-expression Network