LOC110515367 (LOC106591437)


Basic Information

Item Value
gene id LOC110515367
gene name LOC106591437
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 8729223 ~ 8738426 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036940133.1
GTGGCAGAGTTGGAACAGGGGATGTTTCCATCCTTTCACTCTGATCCATCCATCTATAATTCAGCTGACCCGGCCGTATCGgtgtctctttctttccttccctctgtaAAATTGGCGTATGATGCAGGGATGAAGAGGCTGATTAACGAatgggagaaagagggagcgagagaaaggagCTATCACAACAGGTTGTTGTTGGTGGCAGAAAGAACAAGGGAACAACGAGGCAGAAGGAGGAGTGGGTTAATAGCCAAGCGGTTACTATGTCGGGGGCGAACAGTGATCAGTTACATAGGTCTACATTGTCTGTGTACGCGAACCTGATGGAACAGTTCAACCCAGGCCTACAGACGCTAGTTACATTAGGAAACAGCTATGTCAAGGCTttccaagcctTGGCTGTTACCAGTGAGGCCTACTTTAGTGCTGTAGCGAAGATGGGAGAACAGGCCCTTCACACACTCTCCTCTCGCTCActtgGAGATGTCCTGGTACAGATATCTGAGACGCAGAGAAGACTCACAGCTGAGATGGAGGGAGTGATTCgatggttccaggtagaagttTTACAGGCCATGGAGAAGAATGTCAAGTTGGATGAAGAGTACATTGACGGCAGTCGCAGGGTGTATGAGCTGGAGGTGAGGAACCAGGCAGAAGCTCTGGAGAGACAGCTGAGAAGAGGAGCCTTCAGAGActcactggaGCACAGTGAGTACATGCAGTACCTGAGACAGAGTCAACatgacattatgaaggaggaggagaggagGTATCGCTTCCTGGCAGAGAAACACTGCGGACTGACACAGTCACTGCTCTTCCTCAtcaacaagaCAGGGGCTTCCCTACAGCAGAAGGCTGATGGATGGAAGGAGAAAGTGAACGAGACACGAGGCTCCAGACCCCGTAgccccacccaccctgaccaggaggaacagctgTGTGGCTCAGTGAGCTCTCTGCTGCAGACAGTAGATGAGGACAGAGACATGTCTTGGGCCAGGAGAGAACAGCAGGCCCTGGGGAGAGTGCCCTCTAGAGccCCGTCCCCCCTCCACAGCCGATCCCGCTCCTCCTCAGTGGGTGAGTCTCTGGGTCTGGGTGGGGGTAGGACCATGAGAGCCCTGGTGTCCCACCCACCCTCCTCCAACCCCAAACTGCTACCCTTCACCCGGGGAGAGATGGTCACTGTGTTGGTCCAGGAGCCGAGGAATGGGTGGCTGTATGGGAGAACGGAAAGCAGCCTACGCCAGGGCTGGTTCCCAGCAGCTTATGTTTCTTCTATTGAGGAGTTCTCTAACCTTTTGGGGTCCAGTGGCACTTCCTTGAGGAGCCACAGCATGAACAACCTATTGGATCCCTCTGACACCTCCATGGGCCAATCAGAAAAGGCCTACGGTGATGTTGCGCCCCCTACCACACCCACTCGCAGGGCCTCCGTCGACTTCCGAccaatctctcccctccctgagAGGAGGGCGGAGCCAGAGATTGTGACGAGAACAAATAGCCTGAAAGGCTACAACGAGCTCCcgccccctcctcctccgcccCCGCCACCCCCTCACCCAACAACAATGTTCCGGAGGGGGTCAGCTGACTTTCGACCAATCCAGCTTACTTTCCCGGAGAGGACAGCAGAATCATTATCACCCCTTGGAGCTTCTGGAGAAAACCTACTCTTTcccagGGGAACCAATCCCTTTGCGACAGTGAAGCTTAAACCAACAACCACCAATGACAGATCAGCACCGAGGACCCACTGACCAATCAGTACAGAGATGTCGACGTCAAGAAAAGCTGACGTCCTTGAGTTTGACATTGAGTCTATTTTTAGAGAAATTATGTAGATCGTCTAAtcgtgtaaaaatatatatttatttatttgtactattatgCGATTTAAGAATAGCACTTTGTCACATTGTTTGTGTGTTTCGATAGATTTTCCAATGGTTTACTAATTGTTCGATCTAGGATGCTTTTATTGTGAAATAGATACTTTAATTTTGAAAATATCTAAATGAATCTTCTCATTTGTGCATcccttgttctacagtatattagtgtCCAGTCTAGTTTATATTAAATCAttaaataataacaaa
>XM_036940134.1
GTGGCAGAGTTGGAACAGGGGATGTTTCCATCCTTTCACTCTGATCCATCCATCTATAATTCAGCTGACCCGGCCGTATCGgtgtctctttctttccttccctctgtaAAATTGGCGTATGATGCAGGGATGAAGAGGCTGATTAACGAatgggagaaagagggagcgagagaaaggagCTATCACAACAGGTTGTTGTTGGTGGCAGAAAGAACAAGGGAACAACGAGGCAGAAGGAGGAGTGGGTTAATAGCCAAGGTGACTTTCACTATCAAAAGAAAAGAAGCCTGAATACGCTGATTAGTACCTAGCTAGCCTACTACCAACtaaattgttttatttcttaACTTTCAACTAGTACTCTGGAGTGTAAAGAGAATAGTTTATTCATGTATGTAAAATCCTAATTATTCCGTTTTTGTTTTGTGGAAATCGAAGCGGTTACTATGTCGGGGGCGAACAGTGATCAGTTACATAGGTCTACATTGTCTGTGTACGCGAACCTGATGGAACAGTTCAACCCAGGCCTACAGACGCTAGTTACATTAGGAAACAGCTATGTCAAGGCTttccaagcctTGGCTGTTACCAGTGAGGCCTACTTTAGTGCTGTAGCGAAGATGGGAGAACAGGCCCTTCACACACTCTCCTCTCGCTCActtgGAGATGTCCTGGTACAGATATCTGAGACGCAGAGAAGACTCACAGCTGAGATGGAGGGAGTGATTCgatggttccaggtagaagttTTACAGGCCATGGAGAAGAATGTCAAGTTGGATGAAGAGTACATTGACGGCAGTCGCAGGGTGTATGAGCTGGAGGTGAGGAACCAGGCAGAAGCTCTGGAGAGACAGCTGAGAAGAGGAGCCTTCAGAGActcactggaGCACAGTGAGTACATGCAGTACCTGAGACAGAGTCAACatgacattatgaaggaggaggagaggagGTATCGCTTCCTGGCAGAGAAACACTGCGGACTGACACAGTCACTGCTCTTCCTCAtcaacaagaCAGGGGCTTCCCTACAGCAGAAGGCTGATGGATGGAAGGAGAAAGTGAACGAGACACGAGGCTCCAGACCCCGTAgccccacccaccctgaccaggaggaacagctgTGTGGCTCAGTGAGCTCTCTGCTGCAGACAGTAGATGAGGACAGAGACATGTCTTGGGCCAGGAGAGAACAGCAGGCCCTGGGGAGAGTGCCCTCTAGAGccCCGTCCCCCCTCCACAGCCGATCCCGCTCCTCCTCAGTGGGTGAGTCTCTGGGTCTGGGTGGGGGTAGGACCATGAGAGCCCTGGTGTCCCACCCACCCTCCTCCAACCCCAAACTGCTACCCTTCACCCGGGGAGAGATGGTCACTGTGTTGGTCCAGGAGCCGAGGAATGGGTGGCTGTATGGGAGAACGGAAAGCAGCCTACGCCAGGGCTGGTTCCCAGCAGCTTATGTTTCTTCTATTGAGGAGTTCTCTAACCTTTTGGGGTCCAGTGGCACTTCCTTGAGGAGCCACAGCATGAACAACCTATTGGATCCCTCTGACACCTCCATGGGCCAATCAGAAAAGGCCTACGGTGATGTTGCGCCCCCTACCACACCCACTCGCAGGGCCTCCGTCGACTTCCGAccaatctctcccctccctgagAGGAGGGCGGAGCCAGAGATTGTGACGAGAACAAATAGCCTGAAAGGCTACAACGAGCTCCcgccccctcctcctccgcccCCGCCACCCCCTCACCCAACAACAATGTTCCGGAGGGGGTCAGCTGACTTTCGACCAATCCAGCTTACTTTCCCGGAGAGGACAGCAGAATCATTATCACCCCTTGGAGCTTCTGGAGAAAACCTACTCTTTcccagGGGAACCAATCCCTTTGCGACAGTGAAGCTTAAACCAACAACCACCAATGACAGATCAGCACCGAGGACCCACTGACCAATCAGTACAGAGATGTCGACGTCAAGAAAAGCTGACGTCCTTGAGTTTGACATTGAGTCTATTTTTAGAGAAATTATGTAGATCGTCTAAtcgtgtaaaaatatatatttatttatttgtactattatgCGATTTAAGAATAGCACTTTGTCACATTGTTTGTGTGTTTCGATAGATTTTCCAATGGTTTACTAATTGTTCGATCTAGGATGCTTTTATTGTGAAATAGATACTTTAATTTTGAAAATATCTAAATGAATCTTCTCATTTGTGCATcccttgttctacagtatattagtgtCCAGTCTAGTTTATATTAAATCAttaaataataacaaa
>TU1301739
ccccacccaccctgaccaggaGGAACAGGTTAGAGATCCTGTAGCCCTCCCCACCCTGACCAGGAGGAACAAGTTAGAGACAAGTATTCCACCCAACCAATCAACcttcccctgtctccctctctcctcagctgTGTGGCTCAGTGAGCTCTCTGCTGCAGACAGTAGATGAGGACAGAGACATGTCTTGGGCCAGGAGAGAACAGCAGGCCCTGGGGAGAGTGCCCTCTAGAGccCCGTCCCCCCTCCACAGCCGATCCCGCTCCTCCTCAGTGGGTGAGTCTCTGGGTCTGGGTGGGGGTAGGACCATGAGAGCCCTGGTGTCCCACCCACCCTCCTCCAACCCCAAACTGCTACCCTTCACCCGGGGAGAGATGGTCACTGTGTTGGTCCAGGAGCCGAGGAATGGGTGGCTGTATGGGAGAACGGAAAGCAGCCTACGGTAGGTGACAGTGGATAACAGACTATGGTAGGGGTCAGTGGATAACAGACTATGATAGGGGTCAGTAGATAACAGACTATGATAGGGGTCAGTAGATAACAGTCTGTGATAGGGGTCAGTAGATAACAGTCTGTGATAGGGGTCAGTAGATAAGACTATGATAGGGGTCAGTTACTCTCTACAATAGATAGCAGACTATGATAGGGGTCAGTAGATAGCAGACTATGGTAGGGGTCAGTAGATAACAGACTATGATAGGGGTCAGTAGATAACAGACTATGATAGGGGTCAGTTACTCTCTACAATAGATAACAGACTATGGTAGGGGTCAGTTACTCTCTACAATAGATAACAGACTATGATAGGGGTCAGTTACTCTCTACAGTAGATAACAGACTATGATATGGGTCAGTTACTCTCTACAGTAGATAACATACTATGATAGGGGTCAGTGGATAGCAGACTATGATAGGGGTCAGTAGATAACAGACTATGATAGGGGTCAGTGGATAACAGCAAGGACCATTATGATTAATTcctttgtttgtctgtttgtttgttcctttatccatccatcattcattcattcctatgtggctggctggctggctggctggctggctggctgggaaaACAGTGGACTTTATCTAGGAACTTGTCTGTTCCAGTATTTAGGCCATTGTTGTGTTTGCTAATATTCCTCTGGTCTCTGTTGTTCCAACAGCCAGGGCTGGTTCCCAGCAGCTTATGTTTCTTCTATTGAGGAGTTCTCTAACCTTTTGGGGTCCAGTGGCACTTCCTTGAGGAGCCACAGCATGAACAACCTATTGGATCCCTCTGACACCTCCATGGGCCAATCAGAAAAGGCCTACGGTGATGTTGCGCCCCCTACCACACCCACTCGCAGGGCCTCCGTCGACTTCCGAccaatctctcccctccctgagAGGAGGGCGGAGCCAGAGATTGTGACGAGAACAAATAGCCTGAAAGGCTACAACGAGCTCCcgccccctcctcctccgcccCCGCCACCCCCTCACCCAACAACAATGTTCCGGAGGGGGTCAGCTGACTTTCGACCAATCCAGCTTACTTTCCCGGAGAGGACAGCAGAATCATTATCACCCCTTGGAGCTTCTGGAGAAAACCTACTCTTTcccaggtaggtgtgtgtgtcagtgtgtgtgtgtgtgtgtgtgtgcctgctgtGATGTTTGTAATTCGTGTTGAGTGCTAGTCCTTTACATGTCACCTGATCTGTTGCAGGGGAACCAATCCCTTTGCGACAGTGAAGCTTAAACCAACAACCACCAATGACAGATCAGCACCGAGGACCCACTGACCAATCAGTACAGAGATGTCGACGTCAAGAAAAGCTGACGTCCTTGAGTTTGACATTGAGTCTATT

Function

NR:

description
brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036940133.1 False 2114 mRNA 0.50 15 8729223 8738426
XM_036940134.1 False 2294 mRNA 0.49 14 8729223 8738426
TU1301739 True 1853 TUCP 0.51 5 8729499 8731783

Neighbor

gene id symbol gene type direction distance location
ncf4 p40phox coding downstream 32505 8655106 ~ 8696718 (-)
atpv0e2 va0e2 coding downstream 459533 8265675 ~ 8269763 (-)
LOC110485582 LOC106591223 coding downstream 466283 8225298 ~ 8262940 (-)
LOC110485578 LOC105012087 coding downstream 528203 8180481 ~ 8201020 (-)
LOC110518530 LOC106591329 coding downstream 610080 8098509 ~ 8119143 (-)
LOC110515366 pla2g6 coding upstream 309 8738735 ~ 8787152 (-)
LOC118938524 LOC106590932 coding upstream 131595 8870021 ~ 8872667 (-)
LOC118938192 NA coding upstream 135608 8874034 ~ 8878068 (-)
LOC118938525 LOC106590989 coding upstream 147569 8885995 ~ 8888699 (-)
LOC110495146 LOC106590989 coding upstream 150411 8888837 ~ 8896570 (-)
G1141612 NA non-coding downstream 4021 8713268 ~ 8725202 (-)
G1141611 NA non-coding downstream 17907 8710955 ~ 8711316 (-)
G1141594 NA non-coding downstream 52359 8676611 ~ 8676864 (-)
G1141592 NA non-coding downstream 57604 8669859 ~ 8671619 (-)
G1141591 NA non-coding downstream 61177 8667361 ~ 8668046 (-)
G1141618 NA non-coding upstream 9001 8747427 ~ 8747733 (-)
G1141621 NA non-coding upstream 18499 8756925 ~ 8762078 (-)
G1141642 LOC106591467 non-coding upstream 73206 8811632 ~ 8816616 (-)
G1141644 NA non-coding upstream 80707 8819133 ~ 8819387 (-)
G1141645 NA non-coding upstream 82504 8820930 ~ 8821301 (-)
G1141579 NA other downstream 136325 8590965 ~ 8592898 (-)
G1141517 NA other downstream 276904 8426613 ~ 8452319 (-)
G1141490 NA other downstream 396705 8331135 ~ 8332518 (-)
LOC110485610 hoga1 other downstream 662511 8058941 ~ 8080347 (-)
G1141636 cbx6 other upstream 55431 8793857 ~ 8797212 (-)
LOC110494947 NA other upstream 221881 8960307 ~ 8972481 (-)
G1141790 NA other upstream 476714 9215140 ~ 9216298 (-)
LOC110485597 LOC106590780 other upstream 619653 9356000 ~ 9385805 (-)
G1141973 cyh2 other upstream 928819 9666379 ~ 9669182 (-)

Expression


Co-expression Network