LOC118938202 (LOC106592503)


Basic Information

Item Value
gene id LOC118938202
gene name LOC106592503
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 9695450 ~ 9699472 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036940192.1
gtgtgtatatggtgagACATCTTCTAAACAGCTTGAGAACAAGGTTCTGTTTGCGCAACTGCAGGACTGCATCATATCCTGTCTGTCAGAACTGTGACAAGGACAGTTAAAGTTTGGAGCTGCCATCTCTACTAACCGTGCTGTCTGGGGGGATCAAGaCTCCCTGCTATGGAGGCAGTAGGTAAGTATGACTTTACTGCCACTGCTGAGGACGAGCTGAGCTTCAGGAAGGGAGACAACATGAAGATCTTGGGCACCAATGATGATTGGTTGATGGCTGAGCGACATGGAAAGAAGGGATTCATACCACGTAACTACATCAACATTCACCTTCCCAGtTGGTACCAGGAGAGTGCTAGTCGAGGTGAAGCCCAGGAGTCTCTCATGACCCAGCCTATAGGATCCTTTCTGATCAGGGGCAGCCAGAGCACCCCAGGAGATTTCTCCATATCCgttagacacGAGGCAGACGTGCAGCACTTCAAGGTGATGGCAGACACCAGAGGGCAGTATTACCTCTGGTCTGAGAAGTTCAGCTCCTTCAACGAGCTGGTGAACTATTACATGAACAACTCTGTCTCTAAACACAGCCGCATCTATCTGCTGGACACAGAAACACAGGAGAAGGGATTTGGCCAGACCAGGACATCAGCCCCATCCTCTCAGCCCCAGCTTCAGCAGTCCCTGCCCCGAGCACCCCAGCCTCACCTGCCCCTGCCCAGCATACCCCAGCCTCACCAGCCCCGCGCACCCCAGCCTCACCAGCCCCTGCCCAGCATACCCCAGCCTCACCATCTCCTGCCCCGTGTACCCCAGCCTCAACAACCCCTGCCCCGCATACCAGACCCTATACCCccaccacagCGTGCCGCCGTGACCACGGGGGGCGGTGGTCTGATGCAGGTGAGTGCTCAGTATGACTTCAACGCCGAGGAGAAGGACGAGCTGAGCTTTAAGGCCGGTGACATCATCGAGGTGCTGGAGTGTTCCGACATGTCATGGTGGAAAGGAAGACTGAGGGGACAAATGGGAGTGTTCCCTTCCAACTACACCAACCctgtatgagagagagaacatgggtaGCATTTAGAGCTAAATAAGTATCTTAATTAATtatagcagacgttcttatccagagcaacttaatAACAACTAtatttctgagagagagagagagagagagagagagagagagagagagagagagagagagagagagagaaaacataatGATTAGCTTTAGCATTAAATATATGTATTGTAACTTTCTTTCTGGTTTATTATCAATGTACTTTACCGTAGGCTTATGTCAGGATAACACAACTATTTACAACTTCAGAACACAATTATTACTGTATGATTATCAAATAAATGCATTTTCTGTAA

Function

NR:

description
GRB2-related adapter protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036940192.1 True 1386 mRNA 0.50 7 9695450 9699472

Neighbor

gene id symbol gene type direction distance location
LOC118938201 LOC106590876 coding downstream 430 9671928 ~ 9695020 (-)
LOC118936521 LOC107087645 coding downstream 43295 9630367 ~ 9652155 (-)
LOC118938528 LOC106564434 coding downstream 115199 9575964 ~ 9580251 (-)
LOC110485557 rayl coding downstream 156194 9520385 ~ 9539256 (-)
LOC118936472 LOC106594459 coding downstream 288104 9399077 ~ 9407346 (-)
LOC118938203 NA coding upstream 316397 10015869 ~ 10074621 (-)
lgals2b LOC106590712 coding upstream 398475 10097922 ~ 10102555 (-)
LOC110516362 LOC106590757 coding upstream 614251 10313723 ~ 10322183 (-)
LOC110487259 LOC106593718 coding upstream 934677 10634149 ~ 10657332 (-)
LOC110485344 trmt1 coding upstream 997554 10697026 ~ 10717367 (-)
G1141980 NA non-coding downstream 11627 9683582 ~ 9683823 (-)
G1141979 NA non-coding downstream 14114 9680992 ~ 9681336 (-)
G1141978 NA non-coding downstream 21254 9673931 ~ 9674196 (-)
G1141974 NA non-coding downstream 25449 9669763 ~ 9670001 (-)
G1141985 NA non-coding upstream 1293 9700765 ~ 9700985 (-)
G1141987 NA non-coding upstream 4381 9703853 ~ 9718763 (-)
G1141988 NA non-coding upstream 4698 9704170 ~ 9704605 (-)
G1142007 NA non-coding upstream 69374 9768846 ~ 9769196 (-)
G1142012 NA non-coding upstream 75525 9774997 ~ 9830872 (-)
G1141973 cyh2 other downstream 26268 9666379 ~ 9669182 (-)
LOC110485597 LOC106590780 other downstream 314401 9356000 ~ 9385805 (-)
G1141790 NA other downstream 479152 9215140 ~ 9216298 (-)
LOC110494947 NA other downstream 729742 8960307 ~ 8972481 (-)
G1141636 cbx6 other downstream 898238 8793857 ~ 8797212 (-)
G1142121 NA other upstream 280876 9980348 ~ 9982266 (-)
G1142620 NA other upstream 596272 10295744 ~ 10299367 (-)
G1142757 NA other upstream 864988 10564460 ~ 10566465 (-)
LOC110494931 cacna1a other upstream 1120952 10780341 ~ 10913542 (-)

Expression


Co-expression Network