LOC110487235 (xpnpep1)


Basic Information

Item Value
gene id LOC110487235
gene name xpnpep1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 11892173 ~ 11905783 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036940209.1
GTCACGTGACCAGAAACGTCAAGGATTCAATGGCAGCCTACTGTTTTGTAAATTAACACAAGGGACAGCTGCATAAAATAGTGTTTTAAACGACAGAATTGCATTTCTAAGGCTATTTGTCAGATATCTCATAGACGGCTGAAGACGACATGGGCTCAGACGCTGCCATGTCTCCCAAGATCACGGTGGAGCTGCTGCGGCAGCTACGGCAAGCCATGAGGAACACCAAGTACATCGCTGAGCCCATCCAGGCCTACATTGTCCCCTCTGGAGACGCACACCAgAGTGAATACATCGCACCATGTGACTGCAGACGTGAATTCATCTGTGGCTTCAATGGCTCCgcagGCACGGCCATAGTAACAGAGAAGCATGCGGCCATGTGGACAGACGGACGGTACTTCCTCCAGGCCAGCCAGCAGATGGACAACAACTGGACCCTCATGAAGAtggGTCTGAAGGAGACACTTAGCCAGGAGGACTGGCTGATCAGTGTGCTGCCTGAGAACTCGACAGTAGGAGTGGACCCCTGGATCATTGCTGCTGATCAGTGGAAGAACATGTCTAAGGCCCTGGCCAGTGCAGGCCACTCCCTGGTGGCTGTTCAGGACAACCTGATAGATGCCATCTGGATGGACCGTCCAACCAGACCCTCCACTCAGCTCCTCACCCTGGGCCTGGGGTTCACGGGTCTGACCTGGCAGGACAAGATGACCGCTCTGAGATCCAAGATGGCCGAGAGGAAGATCTCTTGGTTCGTTGCCACGGCGCTGGATGAGATTGCATGGCTGTTCAACCTCCGTGGCTCTGACATCGAGTACAACCCTGTTTTCTTTGCCTACGCCATCGTTGGAATGAACACAATCAGGCTCTTCGTGGACATCAAGCGTCTGGCCGTGCCGACGGTGAGGGAGCACCTTCAGCTGGACACGCCCTCCAAGGTGGAGCTTAGCATCCAGACTGCCCCCTATGAGTCTGTGTTCACAGAGCTGCAGGCTGTGTGTGCCTCCCTGGGGCCCAAGGAGAAGGTGTGGATCAGCGACAAAGCCAGCTGCGCCCTCATGCAGGTCATCCCCAAGACCCACCGGTCTCCTATCCCCTACACTCCTCTCTGCCTCGCCAAAGCTGTCAAGAACGCCACCGAGATTCAAGGGATGAAAATGGCCCATATCAAGGATGCTGTCGCCCTTTGTGAGCTCTTCGCTTGGTTGGAAAAAGAGATTCCAAAAGGCACAGTGACTGAGATATCCGCAGCAGATAAGGCAGAGGAGTTACGCAGCCAACAGAAAGACTTTGTTGGACTCAGCTTCCCATCCATTTCCAGTGTTGGACCAAACGGAGCAATCATTCATTACAGACCCCTCCCTGAAACCAACAGAACTCTCTCTCTAAATGAAATCTACCTCCTCGACTCTGGAGCCCAGTATATTGATGGAACAACAGACGTCACCCGCACCATGCACTTTGGATCCCCCTCTGCTTATGAGAAGgAAACCTTCACCTATGTTCTGAAGGGACATATAGCCGTCAGCGCTGCCATTTTCCCCAACGGAACCAAAGGCCACCTGCTGGACTCGTTTGCCCGCCAGGCGCTGTGGGAGTCTGGGCTGGACTACCTTCATGGTACGGGCCACGGGGTGGGATGTTTCCTCAATGTCCATGAGGGACCCTGTGGGATCTCCTACAAGACCTTTGCCGACGAGCCCCTGGAGGCAGGCATGATTGTCAGCGATGAACCTGGGTACTATGAGGACGGCTTGTTTGGCATTCGAATTGAAAACGTTGTTCTGGTGGTGCCAGCAAAACCCAAGTACAACTACAGGAACAAGGGCAGTTTGACATTTGAGCCTCTCACTCTGGTCCCCATCCAAGCCAAAATGGTAAACACAGATCTTCTCACCCAGAAAGAGCGTGATTGGGTGAACGAGTACCACAGGCAGTGCCGGGAGACGATTGGAGCAGAGCTGGAGAGGCAGGGCCGCAAGGAGGCCATGGATTGGCTGATCAGGGAAACCCAGCCAATCGCCTGAAGGCTATTCTGTGACTGACTCTTATTTAATTAAATTGTATTGCCCAGGAGTACAATTGATCGATCAATTGATTGCTCATCTCAGCAGTGATGATAACCTTTTCTTTTGATATTTTCTCTGAGAAGCTACTATCTATGGTTCTGGTCTCTGTGTATTTCACGCTATGCTTCTTTTCTAAAGCATCATCACCATCCATGTCTGAACTGTTTTATGGCGATTCAATAAATATCCAAGTGTGGAAAAAAG
>XM_036940210.1
AAAGGGAGGCGAGTCTCAACTCCGTGTGGTTATTGGAAGAAGCTCGTGTCACGTGACCAGAAACGTCAAGGATTCAATGGCAGCCTACTGTTTTGTAAATTAACACAAGGGACAGCTGCATAAAATAGTGTTTTAAACGACAGAATTGCATTTCTAAGACGCTGCCATGTCTCCCAAGATCACGGTGGAGCTGCTGCGGCAGCTACGGCAAGCCATGAGGAACACCAAGTACATCGCTGAGCCCATCCAGGCCTACATTGTCCCCTCTGGAGACGCACACCAgAGTGAATACATCGCACCATGTGACTGCAGACGTGAATTCATCTGTGGCTTCAATGGCTCCgcagGCACGGCCATAGTAACAGAGAAGCATGCGGCCATGTGGACAGACGGACGGTACTTCCTCCAGGCCAGCCAGCAGATGGACAACAACTGGACCCTCATGAAGAtggGTCTGAAGGAGACACTTAGCCAGGAGGACTGGCTGATCAGTGTGCTGCCTGAGAACTCGACAGTAGGAGTGGACCCCTGGATCATTGCTGCTGATCAGTGGAAGAACATGTCTAAGGCCCTGGCCAGTGCAGGCCACTCCCTGGTGGCTGTTCAGGACAACCTGATAGATGCCATCTGGATGGACCGTCCAACCAGACCCTCCACTCAGCTCCTCACCCTGGGCCTGGGGTTCACGGGTCTGACCTGGCAGGACAAGATGACCGCTCTGAGATCCAAGATGGCCGAGAGGAAGATCTCTTGGTTCGTTGCCACGGCGCTGGATGAGATTGCATGGCTGTTCAACCTCCGTGGCTCTGACATCGAGTACAACCCTGTTTTCTTTGCCTACGCCATCGTTGGAATGAACACAATCAGGCTCTTCGTGGACATCAAGCGTCTGGCCGTGCCGACGGTGAGGGAGCACCTTCAGCTGGACACGCCCTCCAAGGTGGAGCTTAGCATCCAGACTGCCCCCTATGAGTCTGTGTTCACAGAGCTGCAGGCTGTGTGTGCCTCCCTGGGGCCCAAGGAGAAGGTGTGGATCAGCGACAAAGCCAGCTGCGCCCTCATGCAGGTCATCCCCAAGACCCACCGGTCTCCTATCCCCTACACTCCTCTCTGCCTCGCCAAAGCTGTCAAGAACGCCACCGAGATTCAAGGGATGAAAATGGCCCATATCAAGGATGCTGTCGCCCTTTGTGAGCTCTTCGCTTGGTTGGAAAAAGAGATTCCAAAAGGCACAGTGACTGAGATATCCGCAGCAGATAAGGCAGAGGAGTTACGCAGCCAACAGAAAGACTTTGTTGGACTCAGCTTCCCATCCATTTCCAGTGTTGGACCAAACGGAGCAATCATTCATTACAGACCCCTCCCTGAAACCAACAGAACTCTCTCTCTAAATGAAATCTACCTCCTCGACTCTGGAGCCCAGTATATTGATGGAACAACAGACGTCACCCGCACCATGCACTTTGGATCCCCCTCTGCTTATGAGAAGgAAACCTTCACCTATGTTCTGAAGGGACATATAGCCGTCAGCGCTGCCATTTTCCCCAACGGAACCAAAGGCCACCTGCTGGACTCGTTTGCCCGCCAGGCGCTGTGGGAGTCTGGGCTGGACTACCTTCATGGTACGGGCCACGGGGTGGGATGTTTCCTCAATGTCCATGAGGGACCCTGTGGGATCTCCTACAAGACCTTTGCCGACGAGCCCCTGGAGGCAGGCATGATTGTCAGCGATGAACCTGGGTACTATGAGGACGGCTTGTTTGGCATTCGAATTGAAAACGTTGTTCTGGTGGTGCCAGCAAAACCCAAGTACAACTACAGGAACAAGGGCAGTTTGACATTTGAGCCTCTCACTCTGGTCCCCATCCAAGCCAAAATGGTAAACACAGATCTTCTCACCCAGAAAGAGCGTGATTGGGTGAACGAGTACCACAGGCAGTGCCGGGAGACGATTGGAGCAGAGCTGGAGAGGCAGGGCCGCAAGGAGGCCATGGATTGGCTGATCAGGGAAACCCAGCCAATCGCCTGAAGGCTATTCTGTGACTGACTCTTATTTAATTAAATTGTATTGCCCAGGAGTACAATTGATCGATCAATTGATTGCTCATCTCAGCAGTGATGATAACCTTTTCTTTTGATATTTTCTCTGAGAAGCTACTATCTATGGTTCTGGTCTCTGTGTATTTCACGCTATGCTTCTTTTCTAAAGCATCATCACCATCCATGTCTGAACTGTTTTATGGCGATTCAATAAATATCCAAGTGTGGAAAAAAG

Function

symbol description
xpnpep1 Predicted to enable metalloaminopeptidase activity. Predicted to act upstream of or within proteolysis. Is expressed in intestine and liver. Orthologous to human XPNPEP1 (X-prolyl aminopeptidase 1).

NR:

description
xaa-Pro aminopeptidase 1

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004177 aminopeptidase activity molecular_function

KEGG:

id description
K01262 pepP; Xaa-Pro aminopeptidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036940209.1 False 2276 mRNA 0.52 21 11892173 11905736
XM_036940210.1 True 2275 mRNA 0.52 20 11892173 11905783

Neighbor

gene id symbol gene type direction distance location
LOC110485534 LOC106564462 coding downstream 16351 11873981 ~ 11875822 (-)
LOC110485539 cxcl12b coding downstream 80910 11797902 ~ 11811263 (-)
LOC118938530 NA coding downstream 155097 11736364 ~ 11737076 (-)
LOC110485542 LOC106564456 coding downstream 159724 11723726 ~ 11732449 (-)
LOC110485529 LOC106589785 coding downstream 170067 11713458 ~ 11722106 (-)
LOC110485617 LOC106590349 coding upstream 1119 11906902 ~ 11938426 (-)
LOC110485629 NA coding upstream 453070 12358008 ~ 12366285 (-)
LOC110487266 NA coding upstream 510234 12416017 ~ 12448563 (-)
LOC110485637 LOC106590256 coding upstream 805901 12711684 ~ 12720418 (-)
LOC118938209 LOC106564503 coding upstream 816759 12722542 ~ 12744218 (-)
G1143688 NA non-coding downstream 53658 11837392 ~ 11838515 (-)
G1143682 NA non-coding downstream 59768 11831745 ~ 11832405 (-)
G1143657 NA non-coding downstream 118633 11773047 ~ 11773540 (-)
G1143652 NA non-coding downstream 129841 11759602 ~ 11762332 (-)
G1143643 NA non-coding downstream 142920 11746462 ~ 11749253 (-)
G1143729 NA non-coding upstream 27299 11933082 ~ 11933581 (-)
G1143767 NA non-coding upstream 91139 11996922 ~ 11998113 (-)
G1143785 NA non-coding upstream 115347 12021130 ~ 12032311 (-)
G1143791 NA non-coding upstream 123326 12029109 ~ 12030164 (-)
G1143799 NA non-coding upstream 140523 12046306 ~ 12047107 (-)
LOC118938427 LOC106564452 other downstream 397833 11447021 ~ 11494371 (-)
LOC110485554 LOC106590435 other downstream 462808 11425756 ~ 11429422 (-)
G1143449 NA other downstream 610081 11281062 ~ 11282092 (-)
G1143380 NA other downstream 732912 11157886 ~ 11159261 (-)
G1143743 NA other upstream 45812 11951595 ~ 11952568 (-)
G1143771 NA other upstream 137325 12043108 ~ 12081882 (-)
G1144335 LOC106564512 other upstream 709193 12614976 ~ 12615559 (-)
G1144338 NA other upstream 712176 12617959 ~ 12618158 (-)

Expression


Co-expression Network