Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110485518 |
| gene name | LOC106590330 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 12887305 ~ 12891079 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| heme oxygenase-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021556607.2 | True | 1667 | mRNA | 0.43 | 7 | 12887305 | 12891079 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938211 | LOC106590038 | coding | upstream | 20286 | 12858669 ~ 12867019 (+) |
| LOC110493433 | LOC106590051 | coding | upstream | 50001 | 12834952 ~ 12837304 (+) |
| LOC110493434 | LOC106590237 | coding | upstream | 53560 | 12825675 ~ 12833745 (+) |
| LOC110493435 | LOC106564505 | coding | upstream | 62244 | 12821676 ~ 12825061 (+) |
| LOC118938210 | NA | coding | upstream | 84240 | 12768222 ~ 12803065 (+) |
| LOC110485657 | LOC106589640 | coding | downstream | 296170 | 13187249 ~ 13196799 (+) |
| LOC110485665 | LOC106589870 | coding | downstream | 374250 | 13265329 ~ 13294154 (+) |
| LOC110485661 | NA | coding | downstream | 403752 | 13294831 ~ 13296910 (+) |
| LOC110485664 | LOC106589901 | coding | downstream | 408015 | 13299094 ~ 13300656 (+) |
| LOC110485662 | LOC106589652 | coding | downstream | 413572 | 13304651 ~ 13322222 (+) |
| G1144486 | NA | non-coding | upstream | 4425 | 12882262 ~ 12882880 (+) |
| G1144476 | NA | non-coding | upstream | 30211 | 12854718 ~ 12857094 (+) |
| G1144453 | NA | non-coding | upstream | 74622 | 12812232 ~ 12812683 (+) |
| G1144437 | NA | non-coding | upstream | 95202 | 12791792 ~ 12792103 (+) |
| G1144435 | NA | non-coding | upstream | 96174 | 12790798 ~ 12791131 (+) |
| G1144494 | NA | non-coding | downstream | 6613 | 12897692 ~ 12897929 (+) |
| G1144461 | NA | non-coding | downstream | 9553 | 12900632 ~ 12901133 (+) |
| G1144464 | NA | non-coding | downstream | 10243 | 12901322 ~ 12902067 (+) |
| G1144511 | NA | non-coding | downstream | 65150 | 12956229 ~ 12956591 (+) |
| G1144518 | NA | non-coding | downstream | 92560 | 12983639 ~ 12983984 (+) |
| LOC110485642 | cdn2d | other | upstream | 181457 | 12704380 ~ 12706636 (+) |
| LOC110485631 | LOC106590125 | other | upstream | 282874 | 12596679 ~ 12604498 (+) |
| LOC110487269 | LOC106564477 | other | upstream | 549241 | 12336629 ~ 12358769 (+) |
| LOC110493428 | LOC106564483 | other | upstream | 560511 | 12260146 ~ 12332179 (+) |
| G1144683 | NA | other | downstream | 439734 | 13330813 ~ 13331873 (+) |
| LOC110485680 | LOC106564571 | other | downstream | 610361 | 13499396 ~ 13505510 (+) |
| G1144655 | NA | other | downstream | 618134 | 13509213 ~ 13513943 (+) |
| LOC110487284 | LOC107691491 | other | downstream | 790708 | 13681729 ~ 13689683 (+) |
| LOC110485701 | triobp | other | downstream | 887835 | 13775791 ~ 13782295 (+) |
