Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110485729 |
| gene name | LOC106588920 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 14420198 ~ 14451351 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021556882.2 | False | 5481 | mRNA | 0.53 | 32 | 14420198 | 14451350 |
| XM_036940392.1 | False | 5781 | mRNA | 0.53 | 31 | 14420198 | 14451350 |
| XM_021556881.2 | False | 5859 | mRNA | 0.53 | 32 | 14420198 | 14451351 |
| TU1307195 | True | 221 | lncRNA | 0.50 | 2 | 14450656 | 14451176 |
14,420,000
14,424,000
14,428,000
14,432,000
14,436,000
14,440,000
14,444,000
14,448,000
14,452,000
14,452,000
14,456,000
14,460,000
14,464,000
14,468,000
14,472,000
14,476,000
14,480,000
14,484,000
NC_048577.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110485730 | cp063 | coding | downstream | 1442 | 14415041 ~ 14418756 (-) |
| LOC110485728 | LOC100380663 | coding | downstream | 11068 | 14369684 ~ 14409130 (-) |
| LOC110485726 | LOC106564611 | coding | downstream | 58217 | 14339653 ~ 14361981 (-) |
| LOC118938216 | NA | coding | downstream | 144790 | 14255480 ~ 14275408 (-) |
| LOC110485733 | xylt1 | coding | upstream | 95176 | 14546527 ~ 14674363 (-) |
| LOC110487291 | LOC106564596 | coding | upstream | 353317 | 14804668 ~ 14843432 (-) |
| LOC110487289 | LOC106588894 | coding | upstream | 424492 | 14875843 ~ 14891457 (-) |
| LOC110485736 | sec23b | coding | upstream | 444479 | 14895830 ~ 14911145 (-) |
| LOC118938532 | NA | coding | upstream | 684251 | 15135602 ~ 15141540 (-) |
| G1145860 | NA | non-coding | downstream | 80838 | 14335411 ~ 14339360 (-) |
| G1145894 | LOC106564577 | non-coding | downstream | 93300 | 14312637 ~ 14326898 (-) |
| G1145875 | NA | non-coding | downstream | 114559 | 14303758 ~ 14305639 (-) |
| G1145890 | LOC106588948 | non-coding | downstream | 121366 | 14298397 ~ 14298832 (-) |
| G1145889 | NA | non-coding | downstream | 122582 | 14296311 ~ 14297616 (-) |
| G1146001 | NA | non-coding | upstream | 8468 | 14459819 ~ 14460042 (-) |
| G1146005 | NA | non-coding | upstream | 15834 | 14467185 ~ 14467426 (-) |
| G1146007 | NA | non-coding | upstream | 17832 | 14469183 ~ 14469404 (-) |
| G1146011 | NA | non-coding | upstream | 22786 | 14474137 ~ 14474435 (-) |
| G1146013 | coq7 | non-coding | upstream | 23952 | 14475303 ~ 14477480 (-) |
| G1145830 | LOC103354157 | other | downstream | 239868 | 14177247 ~ 14180330 (-) |
| G1145790 | NA | other | downstream | 329411 | 14089658 ~ 14090787 (-) |
| G1145789 | LOC106588930 | other | downstream | 332631 | 14086952 ~ 14087567 (-) |
| LOC110485704 | NA | other | downstream | 607959 | 13798679 ~ 13812239 (-) |
| LOC110485696 | LOC106564559 | other | downstream | 756578 | 13657453 ~ 13665295 (-) |
| G1146251 | NA | other | upstream | 259231 | 14710582 ~ 14711954 (-) |
| G1146446 | NA | other | upstream | 345315 | 14796666 ~ 14797272 (-) |
| G1146485 | NA | other | upstream | 471259 | 14922610 ~ 14925617 (-) |
| LOC110485744 | LOC106588598 | other | upstream | 930809 | 15376146 ~ 15383913 (-) |
| LOC110485748 | pdcd11 | other | upstream | 983750 | 15432063 ~ 15454831 (-) |
| LOC110485718 | NA | coding | downstream | 181279 | 14265680 ~ 14269377 (-) |
