XLOC_030223 (si:dkey-238j22.1)


Basic Information

Item Value
gene id XLOC_030223
gene name si:dkey-238j22.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 33488860 ~ 33491935 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00059100
TTACAGGTGAAATTCATCACTTTTCCATGCCAGAATGGTAGCCGACGGAGTCTCAAAAGTTGTAGTTAGAGTGAATTCACAGGTGACACAAGAcagctttatttttgttaatggaCAGGAAGCAGCAGAAACACCCCACACTTTGATTCTTAAagaatttttcaaaatacaaccaAAGGCATTGGGGATTGTCCAAATAATGACTGGAGTGATGGTCTTCTTTCTGGGTGTTGTTCTCACCACCAGTGGTTACGGTTATCCCGCTATTCTGGTCTACAGTGGCATCACCTACTGGGGATCCTTTATTTACATCAGTGCTGGATCTCTGTCGATTGCTGCGCAGTATAAATATCAGTTGTTTTTGatgaaggcctcCCTTGGAATAAATGTGTTCAGTGCCATATCTGCAGGAATCAGCATTCTTCTGATGTCCATACAAATATTCATACTATCTACAATGGATCCAAGTTTATACGTTGAGGTATTAGAGTACATGCacagtatataatattgtatGTATGTGCTATTTCATGTTGCGGATCATTGGAGTAATGCTGGTACTCACCATTCCCCAGTTCTTCATCTCCGTCTATATCTCAGCATTCGCCTGCAAAGCCACCTGTAACAGGGACTCTACAGTGCTCAGTGTGGCACTGAACTAGGTA

Function

symbol description
si:dkey-238j22.1 Predicted to be located in membrane. Predicted to be integral component of membrane.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000093512

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00059100 True 665 mRNA 0.42 5 33488860 33491935

Neighbor

gene id symbol gene type direction distance location
XLOC_030222 ptges coding upstream 140867 33339762 ~ 33347993 (+)
XLOC_030221 NA coding upstream 150391 33332449 ~ 33338469 (+)
XLOC_030220 usp20 coding upstream 157937 33301005 ~ 33330923 (+)
XLOC_030219 med22 coding upstream 194113 33287611 ~ 33294747 (+)
XLOC_030218 surf1 coding upstream 205142 33281105 ~ 33283718 (+)
XLOC_030224 ms4a17c.2 coding downstream 6318 33498253 ~ 33500331 (+)
XLOC_030225 si:dkey-174k12.3 coding downstream 11173 33503108 ~ 33504967 (+)
XLOC_030226 ms4a17c.1 coding downstream 28008 33519943 ~ 33525677 (+)
XLOC_030227 ttll11 coding downstream 120016 33611951 ~ 33668960 (+)
XLOC_030228 NA coding downstream 443684 33935619 ~ 33937420 (+)
XLOC_030216 CR855258.1 non-coding upstream 494969 32993786 ~ 32993891 (+)
XLOC_030213 CR925757.2 non-coding upstream 602262 32886472 ~ 32886598 (+)
XLOC_030212 CR925757.1 non-coding upstream 603529 32885205 ~ 32885331 (+)
XLOC_030208 CR376857.1 non-coding upstream 851095 32637648 ~ 32637765 (+)
XLOC_030229 NA non-coding downstream 801326 34293261 ~ 34295073 (+)
XLOC_030234 NA non-coding downstream 1151512 34643447 ~ 34797351 (+)
XLOC_030235 NA non-coding downstream 1229202 34721137 ~ 34731442 (+)
XLOC_030236 NA non-coding downstream 1336869 34828804 ~ 34837166 (+)

Expression


Co-expression Network