Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC100136305 |
| gene name | igfbp4 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 20839941 ~ 20859786 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| igfbp4 | Predicted to enable insulin-like growth factor I binding activity and insulin-like growth factor II binding activity. Predicted to be involved in regulation of insulin-like growth factor receptor signaling pathway. Predicted to act upstream of or within several processes, including positive regulation of signal transduction; regulation of glucose metabolic process; and type B pancreatic cell proliferation. Predicted to be located in endoplasmic reticulum lumen and extracellular region. Predicted to be active in extracellular space. |
| description |
|---|
| insulin-like growth factor binding protein 4, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021557125.2 | False | 6490 | mRNA | 0.46 | 4 | 20839941 | 20859748 |
| XM_021557126.2 | False | 6402 | mRNA | 0.46 | 3 | 20839941 | 20859786 |
| TU1315255 | True | 3722 | lncRNA | 0.45 | 2 | 20840507 | 20846049 |
20,840,000
20,844,000
20,848,000
20,852,000
20,856,000
20,860,000
20,864,000
20,868,000
20,872,000
20,876,000
20,880,000
NC_048577.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110485903 | LOC106564954 | coding | downstream | 4038 | 20825311 ~ 20835903 (-) |
| LOC110485902 | LOC106588537 | coding | downstream | 20252 | 20815855 ~ 20819689 (-) |
| LOC110485900 | LOC106587857 | coding | downstream | 25794 | 20796505 ~ 20814147 (-) |
| e7 | e7 | coding | downstream | 96884 | 20737885 ~ 20743057 (-) |
| krt98 | LOC106587813 | coding | downstream | 143840 | 20617221 ~ 20718484 (-) |
| LOC110485908 | LOC106587926 | coding | upstream | 63336 | 20923122 ~ 20928076 (-) |
| LOC100135869 | LOC100135869 | coding | upstream | 81664 | 20941450 ~ 20943340 (-) |
| LOC110485910 | LOC106587943 | coding | upstream | 84049 | 20943835 ~ 20947907 (-) |
| LOC110485911 | LOC106587962 | coding | upstream | 92033 | 20951819 ~ 20964390 (-) |
| LOC110485912 | LOC106587977 | coding | upstream | 110931 | 20970717 ~ 20971727 (-) |
| G1153260 | NA | non-coding | downstream | 11402 | 20821142 ~ 20828539 (-) |
| G1153258 | NA | non-coding | downstream | 12485 | 20820163 ~ 20827456 (-) |
| G1153256 | NA | non-coding | downstream | 26324 | 20812947 ~ 20813617 (-) |
| G1153203 | NA | non-coding | downstream | 107910 | 20731803 ~ 20732031 (-) |
| G1153201 | NA | non-coding | downstream | 110798 | 20728926 ~ 20729143 (-) |
| G1153299 | NA | non-coding | upstream | 39907 | 20899693 ~ 20902005 (-) |
| G1153302 | NA | non-coding | upstream | 53909 | 20913695 ~ 20913924 (-) |
| G1153247 | NA | non-coding | upstream | 61091 | 20920877 ~ 20923009 (-) |
| G1153323 | NA | non-coding | upstream | 102346 | 20962132 ~ 20962360 (-) |
| G1153338 | NA | non-coding | upstream | 140208 | 20999994 ~ 21000204 (-) |
| G1152758 | NA | other | downstream | 153140 | 20674724 ~ 20686801 (-) |
| G1152754 | LOC107090753 | other | downstream | 164189 | 20656472 ~ 20675752 (-) |
| G1152751 | LOC106587793 | other | downstream | 182299 | 20623278 ~ 20657642 (-) |
| G1152720 | NA | other | downstream | 336175 | 20503510 ~ 20503766 (-) |
| G1153336 | NA | other | upstream | 124945 | 20984731 ~ 20987773 (-) |
| si:dkey-237i9.8 | LOC106588103 | other | upstream | 398634 | 21247188 ~ 21260739 (-) |
| LOC110485936 | LOC106588110 | other | upstream | 534020 | 21262691 ~ 21465440 (-) |
| LOC110485947 | LOC106588570 | other | upstream | 1211638 | 22069722 ~ 22073496 (-) |
| si:ch211-214c7.4 | LOC106588372 | other | upstream | 1603167 | 22462260 ~ 22502075 (-) |
