LOC110485928 (pp12c)


Basic Information

Item Value
gene id LOC110485928
gene name pp12c
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 21173895 ~ 21185180 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021557165.2
CAATGGTTAACGGCCGGAGTGGGACATCTTCATTTTATGCACCATCTTTGGCTTCACACCCAGTGCTCTGAATAAGGAAGTGAAACTATACACATGGAGGGTGTGTCTTTtctatcgaatatatattttattgaATAAAGCCCTCGTCGGATAATAATGGGGGACACAGCAAAGGATAAACGGCAAGAACAACTGAAGCGCTGGTCAGGTTCTAGCACCGACAGAGAACCGGCTGTGCCCAGGCGAAGGTGGCGGGGCGATGTCGAGGATGCAGGCTGCTCGGAGGCCGTAAACAACTCCGTTTCAAAGGACCATTCTCAGGATGTGGAGGGAAGCGGATCGACCACCGGGGAAGCCAATAGTCGTCTACTCAAACGAAGGAGGCGAGTGCGGTTTGATACTGCTGCCGAGTTCCTGGCAGCTTGTGCCAGTGGTGACACAGATGAGGCCCAAGAGATGCTGAAAGATGCAAAAGAGATAGAAGGCAAGAATGGAGACTACCAGGGAGAGGTTGTGAATTGTGCCAATGCTGATGGAATCACAGCTCTTCACCAGGCTTGTATAGATGGGAGCATGGAGGTGATGGTCTTTCTCCTGGCTCGGGGTGCCAACATAAACCAGGTGGACAGTGAGGGCTGGACTCCGCTGCATGTGGCAGCCACCTGTGGGAACCTGGAGATCACtgaTTTCCTTTTGCAGCAGGGTGCGTCTCTCACTGCTGTGAACTGCGATGGCGACGTCCCGCTAGATATAGCTGAAGACGAGGCCACTGAGTCGCTCCTGCACCAATACACAGTGAGACAAGGGGTGGACGTGGAGGCAGCTAAGCGGGTGGAGGAGGAGCAGATCATGAAAGACGCCAGAGCCTGGCTGACAGAGGGGCCTCCCTCAGAACTACGGCACCCCAAAACTGGGGCCACTCCCCTGCATGTGGCTGCAGCCAAGGGCTACCTGGAAGCCATCAAACTGCTATGCCAGTGTGGTCTGGACGTGTCAGAGATGGACTGTGATGGCTGGACGCCTCTCCACGCAGCGTCACACTGGGGGCAGGGAGATGCCTGCAGGATACTGGCTGAACAGCTCTGCGACATGGAGGTCTGCAGCAATGGGGGTCAGACTCCATTTGATGTCGCTGATGAGAGTGTTGTGTCGCTGCTGGAGGAGCTGTCACAGAAACAAGCCAACTGGCGTAATGAGCAGTCCATCGTGGACAGACAGAACCCTGCAGGCTCTACTGCTGCAAAAGCCGATAACAAACGACGGAGgaccTCCGTGTGCAGGATGAGCAGTAGGGAGAAGATGAACGTGCAGGACCAGTCTAAAGAGAGGAGGTCTGAAGGCCTGGAGCTCAGCGAGGAGAAAGAGAGCAGCCCTGaaAGCTCCACTCTATCCAGTCCAGACACAGAGAGTGCCACCTCCACCGTCAGCCCTGCTGAGAAGCAGACTCCAGAGGAGAAGGATGTGGAGGACCGGGACCAGGACAGAGCCAGTCGTACAGCCCGGGTCCAGCCCACCCCCCAGAGGAAAGAACCCCTGGCCGATAGTCCCAACAACACCAACCCAGACAGACGGAAGTTCCAGGCCCCTGTAAGAGACGAGGAGTCTGAGTCTCAGAGGAAGGCACGATCACGCCTCATGCGCCAGTCTCGCCGCTCCACACAGGGTGTGACGCTCACTGACTTGAAGGAGGCAGAGAAGAGCGTAGCCAAACCGGCTGATCCACCACCTAGCAACATCCTGCATGTCAGCCCTATAGTCACCATAACACCTGCTGAGAGAGACACCGACCCAGTGAAGGAGGTTGGGTCCGAGGGAGAGACGCGGCTAGGAGTGAGGGACCGacggaagggaaggagagagagacgctcCACCGGGGTGGTTCAGCTAGGGaatGAACATTTGGATGCAATGGATGAAGCCCAACAGGATGAAAACCACCATCATAGTTCACCCAGTGAGCCTCAGTTGGGAGATTCTTCACCAGACTACAAAATGCTGTACAGGTCGGTGCTGCAGGAGAACGGCCTGCTCAAAGACAAGCTGCAGGAGACGGCGCTGCTGCTCAGCCAGAGCAAAGTGGAGCTGGAGAGACTCCGACAGAGTCAAGAGAGCAACACAGAGAGGCCGGCCCTGCTGGAACTGGAGAGATTTGAGAAGAGAGCACTCCAGagaaaagcagtggaactggagGATGAGCTGAAGGTGCTGGTGGATCTCCGAGCAGACAACCAGAGGCTAAAGGATGAGAATGCCGCTCTCAtccgtgtcatcagcaaactttcCAAATGAGCCTCCTCTCCCAAACCTCAATACGGAGAAAAGTGTTAAAAGGTTCCTGTCTCTTGCCCAACTCAACAAGGCACATACCGGGAACAAAACCCAGCATAAACTGCGTTCTGCTCTGATAGAAGACCAACGATGCATTTGTTCAATGACATTTTTGGATTTATAACTGGAAAGAATAGTTTTTGCAGGGTTATCATGCGCCTTTGGTTTGTCTTCACTCATGACTCGATCTACTGTATAACAAGCTGAACTGCACCTCCTATGGATTCACAGGGTACTGTATGGTGTTCCTGTTCAAATTCTTAAagtagattattatttttttgaccCTAAATATTTTGTGCTTCGCTTCTGCGTTACTTTGTTTAAGGATACATGTGTTTTTAAGATATATTTTAATAACCATGCAAAGTGCACGCTTACGATAACAACATGATTTTACTTCAGAGTACATACCACTAGACACCTAAacaggactgggggggggggggcgatgcCAACGTCAGGTGCTTCAGTTCTGAGGAGAGGCGGAGAAGGTTGTTATTAGGTTTTGACATGCATATTCCACAAAAATGTGCCAAAAATACAAACCCCCATTTACGGCTTGTTTGGCATGTTGTTTGGGGGAAAGGTGAAGTGATTGGTTTGTCTCTCTCAGGACGAGTCTGGGTCAATACTGTACTTGAGCTGACTACTGTTAAAGTTGGACCAAACTGTATGCGCATGTAAAAACAAATTTGAATGTATATTTATGTGTATATTTATGTACAGGGGCCCTCTCCACATCCAGTGATGTAGTAATGGTCTCTTTAGAAAAGGACGGAGATGCTGGGTGCTCATACTGTGACGGAGACCTGTTAGTTAGTAGACTGCAAGATGGGTCAAGTCTTTTGAATGTTTACTCCGTTTTAAATGCATGCCAAATTGTATTTTGACAATGTGCCTttctatatatatttgtaattaaTATTTACACAAcgtcaaaaataaaaatacagtatGGTAAATTAAGCTCGCCATCTCACAGTTCCTGTGAGGGGAAGAGAATAAAACTCACGATCAACACCTTTACCTAATGGAGACATTAGGGAAGCACTGCATGTGGAAGTCAATGctcattttatttatattgtgCTTTtcattaaaggtccaatgcagctgtttttatctcaatatcaaatcattttt
>XM_021557166.2
CAATGGTTAACGGCCGGAGTGGGACATCTTCATTTTATGCACCATCTTTGGCTTCACACCCAGTGCTCTGAATAAGGAAGTGAAACTATACACATGGAGGGTGTGTCTTTtctatcgaatatatattttattgaATAAAGCCCTCGTCGGATAATAATGGGGGACACAGCAAAGGATAAACGGCAAGAACAACTGAAGCGCTGGTCAGGTTCTAGCACCGACAGAGAACCGGCTGTGCCCAGGCGAAGGTGGCGGGGCGATGTCGAGGATGCAGGCTGCTCGGAGGCCGTAAACAACTCCGTTTCAAAGGACCATTCTCAGGATGTGGAGGGAAGCGGATCGACCACCGGGGAAGCCAATAGTCGTCTACTCAAACGAAGGAGGCGAGTGCGGTTTGATACTGCTGCCGAGTTCCTGGCAGCTTGTGCCAGTGGTGACACAGATGAGGCCCAAGAGATGCTGAAAGATGCAAAAGAGATAGAAGGCAAGAATGGAGACTACCAGGGAGAGGTTGTGAATTGTGCCAATGCTGATGGAATCACAGCTCTTCACCAGGCTTGTATAGATGGGAGCATGGAGGTGATGGTCTTTCTCCTGGCTCGGGGTGCCAACATAAACCAGGTGGACAGTGAGGGCTGGACTCCGCTGCATGTGGCAGCCACCTGTGGGAACCTGGAGATCACtgaTTTCCTTTTGCAGCAGGGTGCGTCTCTCACTGCTGTGAACTGCGATGGCGACGTCCCGCTAGATATAGCTGAAGACGAGGCCACTGAGTCGCTCCTGCACCAATACACAGTGAGACAAGGGGTGGACGTGGAGGCAGCTAAGCGGGTGGAGGAGGAGCAGATCATGAAAGACGCCAGAGCCTGGCTGACAGAGGGGCCTCCCTCAGAACTACGGCACCCCAAAACTGGGGCCACTCCCCTGCATGTGGCTGCAGCCAAGGGCTACCTGGAAGCCATCAAACTGCTATGCCAGTGTGGTCTGGACGTGTCAGAGATGGACTGTGATGGCTGGACGCCTCTCCACGCAGCGTCACACTGGGGGCAGGGAGATGCCTGCAGGATACTGGCTGAACAGCTCTGCGACATGGAGGTCTGCAGCAATGGGGGTCAGACTCCATTTGATGTCGCTGATGAGAGTGTTGTGTCGCTGCTGGAGGAGCTGTCACAGAAACAAGCCAACTGGCGTAATGAGCAGTCCATCGTGGACAGACAGAACCCTGCAGGCTCTACTGCTGCAAAAGCCGATAACAAACGACGGAGgaccTCCGTGTGCAGGATGAGCAGTAGGGAGAAGATGAACGTGCAGGACCAGTCTAAAGAGAGGAGGTCTGAAGGCCTGGAGCTCAGCGAGGAGAAAGAGAGCAGCCCTGaaAGCTCCACTCTATCCAGTCCAGACACAGAGAGTGCCACCTCCACCGTCAGCCCTGCTGAGAAGACTCCAGAGGAGAAGGATGTGGAGGACCGGGACCAGGACAGAGCCAGTCGTACAGCCCGGGTCCAGCCCACCCCCCAGAGGAAAGAACCCCTGGCCGATAGTCCCAACAACACCAACCCAGACAGACGGAAGTTCCAGGCCCCTGTAAGAGACGAGGAGTCTGAGTCTCAGAGGAAGGCACGATCACGCCTCATGCGCCAGTCTCGCCGCTCCACACAGGGTGTGACGCTCACTGACTTGAAGGAGGCAGAGAAGAGCGTAGCCAAACCGGCTGATCCACCACCTAGCAACATCCTGCATGTCAGCCCTATAGTCACCATAACACCTGCTGAGAGAGACACCGACCCAGTGAAGGAGGTTGGGTCCGAGGGAGAGACGCGGCTAGGAGTGAGGGACCGacggaagggaaggagagagagacgctcCACCGGGGTGGTTCAGCTAGGGaatGAACATTTGGATGCAATGGATGAAGCCCAACAGGATGAAAACCACCATCATAGTTCACCCAGTGAGCCTCAGTTGGGAGATTCTTCACCAGACTACAAAATGCTGTACAGGTCGGTGCTGCAGGAGAACGGCCTGCTCAAAGACAAGCTGCAGGAGACGGCGCTGCTGCTCAGCCAGAGCAAAGTGGAGCTGGAGAGACTCCGACAGAGTCAAGAGAGCAACACAGAGAGGCCGGCCCTGCTGGAACTGGAGAGATTTGAGAAGAGAGCACTCCAGagaaaagcagtggaactggagGATGAGCTGAAGGTGCTGGTGGATCTCCGAGCAGACAACCAGAGGCTAAAGGATGAGAATGCCGCTCTCAtccgtgtcatcagcaaactttcCAAATGAGCCTCCTCTCCCAAACCTCAATACGGAGAAAAGTGTTAAAAGGTTCCTGTCTCTTGCCCAACTCAACAAGGCACATACCGGGAACAAAACCCAGCATAAACTGCGTTCTGCTCTGATAGAAGACCAACGATGCATTTGTTCAATGACATTTTTGGATTTATAACTGGAAAGAATAGTTTTTGCAGGGTTATCATGCGCCTTTGGTTTGTCTTCACTCATGACTCGATCTACTGTATAACAAGCTGAACTGCACCTCCTATGGATTCACAGGGTACTGTATGGTGTTCCTGTTCAAATTCTTAAagtagattattatttttttgaccCTAAATATTTTGTGCTTCGCTTCTGCGTTACTTTGTTTAAGGATACATGTGTTTTTAAGATATATTTTAATAACCATGCAAAGTGCACGCTTACGATAACAACATGATTTTACTTCAGAGTACATACCACTAGACACCTAAacaggactgggggggggggggcgatgcCAACGTCAGGTGCTTCAGTTCTGAGGAGAGGCGGAGAAGGTTGTTATTAGGTTTTGACATGCATATTCCACAAAAATGTGCCAAAAATACAAACCCCCATTTACGGCTTGTTTGGCATGTTGTTTGGGGGAAAGGTGAAGTGATTGGTTTGTCTCTCTCAGGACGAGTCTGGGTCAATACTGTACTTGAGCTGACTACTGTTAAAGTTGGACCAAACTGTATGCGCATGTAAAAACAAATTTGAATGTATATTTATGTGTATATTTATGTACAGGGGCCCTCTCCACATCCAGTGATGTAGTAATGGTCTCTTTAGAAAAGGACGGAGATGCTGGGTGCTCATACTGTGACGGAGACCTGTTAGTTAGTAGACTGCAAGATGGGTCAAGTCTTTTGAATGTTTACTCCGTTTTAAATGCATGCCAAATTGTATTTTGACAATGTGCCTttctatatatatttgtaattaaTATTTACACAAcgtcaaaaataaaaatacagtatGGTAAATTAAGCTCGCCATCTCACAGTTCCTGTGAGGGGAAGAGAATAAAACTCACGATCAACACCTTTACCTAATGGAGACATTAGGGAAGCACTGCATGTGGAAGTCAATGctcattttatttatattgtgCTTTtcattaaaggtccaatgcagctgtttttatctcaatatcaaatcattttt

Function

NR:

description
protein phosphatase 1 regulatory subunit 12C-like isoform X2

GO: NA

KEGG:

id description
K17457 PPP1R12C, MBS85; protein phosphatase 1 regulatory subunit 12C

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021557165.2 False 3474 mRNA 0.50 20 21173895 21185180
XM_021557166.2 True 3471 mRNA 0.50 20 21173895 21185180

Neighbor

gene id symbol gene type direction distance location
LOC118938239 NA coding upstream 30830 21139834 ~ 21143065 (+)
LOC110485920 LOC106588056 coding upstream 105115 21057745 ~ 21068780 (+)
LOC110485918 NA coding upstream 123277 21045806 ~ 21050618 (+)
LOC110485108 LOC106564942 coding upstream 135347 21027718 ~ 21038548 (+)
LOC110485916 LOC106588031 coding upstream 146308 21020420 ~ 21027587 (+)
LOC110485931 LOC106564932 coding downstream 26405 21208787 ~ 21214615 (+)
LOC110485937 NA coding downstream 280031 21465211 ~ 21465979 (+)
LOC110485938 LOC106564925 coding downstream 299197 21484377 ~ 21489195 (+)
LOC118938483 NA coding downstream 375639 21560819 ~ 21561997 (+)
LOC110485944 LOC106588224 coding downstream 782966 21968146 ~ 21974128 (+)
G1153017 NA non-coding upstream 149404 21024264 ~ 21024491 (+)
G1153015 NA non-coding upstream 151031 21022583 ~ 21022864 (+)
G1153014 NA non-coding upstream 157349 21015338 ~ 21016546 (+)
G1153050 NA non-coding downstream 29936 21215116 ~ 21216270 (+)
G1153051 NA non-coding downstream 33315 21218495 ~ 21218904 (+)
G1152966 NA non-coding downstream 35297 21220477 ~ 21224654 (+)
G1153069 NA non-coding downstream 90159 21275339 ~ 21275599 (+)
G1152985 LOC106588089 other upstream 17017 21155494 ~ 21156878 (+)
LOC110485904 LOC106564952 other upstream 294358 20860370 ~ 20880503 (+)
LOC110485890 LOC106587723 other upstream 718910 20442132 ~ 20455056 (+)
LOC110485885 LOC106587662 other upstream 783449 20388891 ~ 20409124 (+)
G1153651 LOC106576875 other downstream 422312 21607492 ~ 21608829 (+)
G1154234 NA other downstream 973391 22158571 ~ 22159429 (+)
G1154335 NA other downstream 1254456 22439636 ~ 22456349 (+)
G1154412 mcoln1 other downstream 1326199 22511379 ~ 22511740 (+)

Expression


Co-expression Network