LOC110485937


Basic Information

Item Value
gene id LOC110485937
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 21465211 ~ 21465979 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002468010.2
TCTCCCCACGGCTGCTCTTTGCTATGGGAAGGTGCTCGAGACGAGGCCCATCTTCACACGGACACTCTGCCACAACCACGCCACGCGCTGTCAATGACGCTTGTCGTGTGGTCTTCTGACACAAACGTGTGTCGACGAGGCAAATGTCGTAAGCTAATTGACAAACAATTCCAAGTATTTCTCCAGAGACACTTCTTCAGCACTTCAGCAAGGGCGCCGCCATCTTGGGAAAGACCCACAATGCACTCGGGGTTGGACTGAAGATGTCATTAAAAACGTCATCATGGTAGACCAGAAAAGCTACATCCCTGATTGGCAGATGAGTGGCAACCCTGATTAGAAGCACTTGATGCTCATCGGTTGTTCTTTACAAATGCTGTTTTGAATTAAAGAAAATTGTACCTACACACTGAAGAAGGCTGTAAAGCCGAAACATCTGTGTATGCTATCCCTGatgcag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002468010.2 True 460 mRNA 0.48 2 21465211 21465979

Neighbor

gene id symbol gene type direction distance location
LOC110485931 LOC106564932 coding upstream 250596 21208787 ~ 21214615 (+)
LOC110485928 pp12c coding upstream 280031 21173895 ~ 21185180 (+)
LOC118938239 NA coding upstream 322146 21139834 ~ 21143065 (+)
LOC110485920 LOC106588056 coding upstream 396431 21057745 ~ 21068780 (+)
LOC110485918 NA coding upstream 414593 21045806 ~ 21050618 (+)
LOC110485938 LOC106564925 coding downstream 18398 21484377 ~ 21489195 (+)
LOC118938483 NA coding downstream 94840 21560819 ~ 21561997 (+)
LOC110485944 LOC106588224 coding downstream 502167 21968146 ~ 21974128 (+)
LOC110485943 LOC106588557 coding downstream 546032 22012011 ~ 22021092 (+)
LOC110485945 LOC105021619 coding downstream 574709 22040688 ~ 22042468 (+)
G1153074 NA non-coding upstream 184680 21280113 ~ 21280531 (+)
G1153069 NA non-coding upstream 189612 21275339 ~ 21275599 (+)
G1152966 NA non-coding upstream 240557 21220477 ~ 21224654 (+)
G1153051 NA non-coding upstream 246307 21218495 ~ 21218904 (+)
G1153050 NA non-coding upstream 248941 21215116 ~ 21216270 (+)
G1153185 NA non-coding downstream 3739 21469718 ~ 21469997 (+)
G1153191 NA non-coding downstream 9177 21475156 ~ 21475375 (+)
G1153193 NA non-coding downstream 12357 21478336 ~ 21478536 (+)
G1153569 NA non-coding downstream 24770 21490749 ~ 21491000 (+)
G1153571 LOC100380853 non-coding downstream 25559 21491538 ~ 21491775 (+)
G1152985 LOC106588089 other upstream 308333 21155494 ~ 21156878 (+)
LOC110485904 LOC106564952 other upstream 585674 20860370 ~ 20880503 (+)
LOC110485890 LOC106587723 other upstream 1010226 20442132 ~ 20455056 (+)
G1153651 LOC106576875 other downstream 141513 21607492 ~ 21608829 (+)
G1154234 NA other downstream 692592 22158571 ~ 22159429 (+)
G1154335 NA other downstream 973657 22439636 ~ 22456349 (+)
G1154412 mcoln1 other downstream 1045400 22511379 ~ 22511740 (+)
c13h17orf67 LOC106564992 other downstream 1140329 22606256 ~ 22610371 (+)

Expression


Co-expression Network