LOC110485975 (apoh)


Basic Information

Item Value
gene id LOC110485975
gene name apoh
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 23065422 ~ 23070647 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021557247.2
AAAATCACACACATAAATATTCATAGTAGTAGGTCTGCGTGTGTAGATCTGCGTCATCTAGCCACATCAATGTTATACTGCTAGAATAGCTTCAGTCAACTTTATTGTACCACATAAATGGATCTGGCAACCATGATTTGGTGAAGAGTTACAGAAAACTGGTGATGTGTACTAGGAATGGGGGTGGGGCAACAGTAAGGTTCACAAAGGTCTGGTGCTTTACGGTAAATTACGTAAATAGTAAAAGAGCCAGAGGTTGCCTCATTCGGCGTTGTCATCGACCCTTCTCCAATTACCTCGAACATAAAAAGTTGGGAGCTCCAACGACATTCCGATTTTTACCCTTgaaaccagagaggagagacgctCTCTCCACACCACAGACGATGGCACTGTCAAGTCTGTCTTTGCCGCTGATCTGTCTGCTTGCCTTGTATACACCAGTGACAACCAAGAAAGAATGTGGCCGCCCGCCCCTGGGTGACGGTATGGAACTGGAGGGGCTCCAGAGGGTGTACTCCCCCGGAGACGAGGTGGCGCTGTCGTGTAAACGAGGGTACACACCCACCTCAGGCTCTCGCACAATCAGCTGCACTGCTAGCGGAGGCTGGACCAAGTCTAGACTCACGTGCTCAATAAAGAGTTGCTCTCTCCCAGAAGCGCTGGGCCATGGAGACATGGAGTTTGTGGACATTGTCTACCAGAGTGTCATCAACTACACCTGCCACGAGGGGTATACCCTGCAAGGAGCCAGTACCATTGAGTGCTTGTACGACGGTCAATGGAGTGATCCCCCACCGACGTGCGCACCGGTGACGTGTGGTCTTCCTCCAATACCTAAATATGGGAAAATGGTCTACGACAGAAAGTTGACAGGCGAAACGGTTGTGTTTGGTTTTGGGGGGACCTATGAGTGTTTCCCTCCACTTGTCCTCATAGGCAGTGAGAGGGGATCGTGCAGCACTGACGGAAACTGGACTGAGCCACCAGAATGTAAATTGGTGACCTGTTCAGCGCCAACAGGCATCAGCAACGGCTACATGACCAATACTGACAAGAGGGAGTACGGCTTCAAGGAGACTGTCAAATATGGATGTAATGTAGACTATGTCCTGGATGGGCCTGTGGAGATTGAATGTCTTAAAACAGGGGATTGGTCAAAGGAGCCAGTTTGCAGGGCTTCCTGCAAGGTAGGTATTAAAAGAGGACGCATCCTTTACAATGGAAAGAAATTTTGGATAGAGGATTTCGAGCCCAATAGAATCTCGCATGCGGACGTCGTCTTGGTCTATTGTATGAACGAGGAGAAGAAGTGTGGCTATGCAGTGTCAACCCAATGCATCAATGGAAAACTCAAGATCCCAGAATGCTTCGAAGAACCAAGTAGGATTTCATATCAATTCAACTCTGATTCCCTGCCATCTGAGATAGCCCAGTGCTGAAACGCTATGCATGACAAAGCAAATTGAGACCAAGAACATTGATTGCCTGTGAATTAAATGTCATGTGTATTTCTATGTAATGCTATCCATTTGTTCTTCGGAATCATTTTTCTGTAGAGAACTAATTTTACGATGAATAAAATATACTGTTTGCTTGTA

Function

symbol description
apoh Enables identical protein binding activity; lipoprotein lipase activator activity; and phospholipid binding activity. Involved in several processes, including blood coagulation, intrinsic pathway; negative regulation of apoptotic process; and regulation of blood coagulation. Located in cell surface and extracellular space. Part of chylomicron; high-density lipoprotein particle; and very-low-density lipoprotein particle. Colocalizes with collagen-containing extracellular matrix. Implicated in antiphospholipid syndrome; myocardial infarction; and peripheral vascular disease. Biomarker of arteriosclerosis; diabetes mellitus; diabetic retinopathy; macular retinal edema; and type 2 diabetes mellitus.

NR:

description
beta-2-glycoprotein 1-like

GO: NA

KEGG:

id description
K17305 APOH, B2G1; beta-2-glycoprotein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021557247.2 True 1601 mRNA 0.47 8 23065422 23070647

Neighbor

gene id symbol gene type direction distance location
LOC110485974 LOC106585623 coding downstream 71907 22915614 ~ 22993515 (-)
LOC110485111 LOC106588440 coding downstream 226514 22837985 ~ 22838908 (-)
LOC110485973 LOC106588447 coding downstream 230779 22766301 ~ 22834643 (-)
ccdc40 ccdc40 coding downstream 299267 22754475 ~ 22766155 (-)
LOC110485971 LOC106588435 coding downstream 320123 22728553 ~ 22745299 (-)
LOC110485976 LOC106585643 coding upstream 359 23071006 ~ 23077109 (-)
LOC110485982 LOC106567469 coding upstream 146417 23216183 ~ 23220256 (-)
LOC118938242 NA coding upstream 157396 23228043 ~ 23233566 (-)
LOC110485981 NA coding upstream 167997 23238644 ~ 23250237 (-)
LOC110485986 LOC106585679 coding upstream 371840 23442487 ~ 23499325 (-)
G1155513 NA non-coding downstream 53920 23011185 ~ 23011502 (-)
G1155491 NA non-coding downstream 83377 22981835 ~ 22982045 (-)
G1155490 NA non-coding downstream 83652 22981539 ~ 22981770 (-)
G1155489 NA non-coding downstream 84245 22980968 ~ 22981177 (-)
G1155488 NA non-coding downstream 84971 22980220 ~ 22980451 (-)
G1155571 NA non-coding upstream 34361 23105008 ~ 23108070 (-)
G1155704 NA non-coding upstream 250499 23321146 ~ 23325274 (-)
G1155773 NA non-coding upstream 314449 23385096 ~ 23385296 (-)
G1155774 NA non-coding upstream 317482 23388129 ~ 23388341 (-)
G1155776 NA non-coding upstream 318576 23389223 ~ 23389559 (-)
si:ch211-214c7.4 LOC106588372 other downstream 601747 22462260 ~ 22502075 (-)
LOC110485947 LOC106588570 other downstream 991997 22069722 ~ 22073496 (-)
LOC110485936 LOC106588110 other downstream 1600156 21262691 ~ 21465440 (-)
si:dkey-237i9.8 LOC106588103 other downstream 1804779 21247188 ~ 21260739 (-)
G1153336 NA other downstream 2077649 20984731 ~ 20987773 (-)
G1155674 NA other upstream 155567 23226214 ~ 23250232 (-)
G1155782 LOC106585672 other upstream 331732 23402379 ~ 23403632 (-)
G1156460 LOC106585723 other upstream 528860 23599507 ~ 23601690 (-)
LOC110485996 LOC106586353 other upstream 636110 23699036 ~ 23707634 (-)

Expression


Co-expression Network