LOC110485976 (LOC106585643)


Basic Information

Item Value
gene id LOC110485976
gene name LOC106585643
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 23071006 ~ 23077109 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036940642.1
TTGAGAAAGCAGGAAATTGATTTTGGTCGAACACTTTCTGGGCTTTTGAATGGACCATCTACATTTTTCACCGTCCACTGCCCGAAAGAACGGACACAGTCTCTCTCAACCCTCCCCCGGAAGATGAACCCAACCTTGGCTTTGCTGCTGCTCTGTCAGCTTGCCTTGCATACGTCCGTGACATCCAAGAAAGTGTGTGGCCGTCCGCCTGTGACCGACGGTATAGATGCATTGGGTCTAAAGCGCGTGTATGAGATTGGAGAAGAGGTGACCCTGGCGTGCGAGCGTGGATACACACCTGGGACCGGCAAGACTGCCAGGATCACCTGCTCTGCCTCGGGAGAGTGGACCAAACTGGACCTTGTGTGTTCTCCAAAGATGTGCCCTCTCCCCAAGCCTATGCAAAAGCCAGGGATGATTGACGTGCCATTCAAGAGTGTACTCAACTACACATGTGATGACGGGTACGTCATGATAGGAGCCAATGAGAGCGTGTGTTTACACGATGGTACCCTCAGTGCACCACCACCAATGTGTAAAGCTGTGAGTTGTGCTCTGCCTCAAGCACCGAAGCATGGCAAAATTGTCTATGACAATAAGAAGTTCACTGGCAATGAAATCCAGTACGGACAGAGTTGGACGTATGAGTGTTTGCCGCCAAGAGCTCCCATTGGCAACGAGAGAGGATCGTGCTTGGCCAGTGGAAACGTGACTGAGCCACCGGTATGCAAGGAGGTGAGTTGCTCCATCCCACCAACGATAGACCATGGCATCATCACCTTTGCTGTGATGAGGGAGGCCGGCTACAAGGAGAAGGTCAAGTACCAGTGCCAGGAACACTACGTTCTGGACGGTTCTGAGGAAATACAGTGTCAGAATACAGGCAACTGGTCCACTTTGCCCGTTTGTAGAGCCCCCTGTAAAGTTAACATCAACAGAGGTCGCATCTTCTACAACGCCAAGAAGATCTGGATTGGGGATCTGAAACCCAATAGAGTCCTTCACGGTGAGCCTGTTGTGTTCTACTGTCTGAACAAGGAGTTGAAGTGTGGCATTCCAGTAGCAAGTCAGTGCATCGACGGCACACTCAATACCCCAGAATGCTTTAAAGAACCAGGCAAGATGGAGTACACCCTCAAGCCCAAATCACTTCCATCTGAGATTGCGATGTGTCAAGCTGACCTAACAAAATAAACACCATATAAAGAGGATAAATATGGCAAATAAATTACAAATAAATATGACTTAAAAATA

Function

NR:

description
beta-2-glycoprotein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036940642.1 True 1254 mRNA 0.49 9 23071006 23077109

Neighbor

gene id symbol gene type direction distance location
LOC110485975 apoh coding downstream 359 23065422 ~ 23070647 (-)
LOC110485974 LOC106585623 coding downstream 77491 22915614 ~ 22993515 (-)
LOC110485111 LOC106588440 coding downstream 232098 22837985 ~ 22838908 (-)
LOC110485973 LOC106588447 coding downstream 236363 22766301 ~ 22834643 (-)
ccdc40 ccdc40 coding downstream 304851 22754475 ~ 22766155 (-)
LOC110485982 LOC106567469 coding upstream 139955 23216183 ~ 23220256 (-)
LOC118938242 NA coding upstream 150934 23228043 ~ 23233566 (-)
LOC110485981 NA coding upstream 161535 23238644 ~ 23250237 (-)
LOC110485986 LOC106585679 coding upstream 365378 23442487 ~ 23499325 (-)
LOC110485989 LOC106585705 coding upstream 422893 23500002 ~ 23506509 (-)
G1155513 NA non-coding downstream 59504 23011185 ~ 23011502 (-)
G1155491 NA non-coding downstream 88961 22981835 ~ 22982045 (-)
G1155490 NA non-coding downstream 89236 22981539 ~ 22981770 (-)
G1155489 NA non-coding downstream 89829 22980968 ~ 22981177 (-)
G1155488 NA non-coding downstream 90555 22980220 ~ 22980451 (-)
G1155571 NA non-coding upstream 27899 23105008 ~ 23108070 (-)
G1155704 NA non-coding upstream 244037 23321146 ~ 23325274 (-)
G1155773 NA non-coding upstream 307987 23385096 ~ 23385296 (-)
G1155774 NA non-coding upstream 311020 23388129 ~ 23388341 (-)
G1155776 NA non-coding upstream 312114 23389223 ~ 23389559 (-)
si:ch211-214c7.4 LOC106588372 other downstream 607331 22462260 ~ 22502075 (-)
LOC110485947 LOC106588570 other downstream 997581 22069722 ~ 22073496 (-)
LOC110485936 LOC106588110 other downstream 1605740 21262691 ~ 21465440 (-)
si:dkey-237i9.8 LOC106588103 other downstream 1810363 21247188 ~ 21260739 (-)
G1153336 NA other downstream 2083233 20984731 ~ 20987773 (-)
G1155674 NA other upstream 149105 23226214 ~ 23250232 (-)
G1155782 LOC106585672 other upstream 325270 23402379 ~ 23403632 (-)
G1156460 LOC106585723 other upstream 522398 23599507 ~ 23601690 (-)
LOC110485996 LOC106586353 other upstream 629648 23699036 ~ 23707634 (-)

Expression


Co-expression Network