LOC118938638


Basic Information

Item Value
gene id LOC118938638
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 23683457 ~ 23683591 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005035845.1
GCCTTGTGGTTCCTAGAGACAGCTGCACTGTGCTGATCTGTGGGTTTTGATTGATTGGCAAATATTAATCTCTGTGATTTATGCATGGGAGCTACCACTCCAAGTAGCTTCTATAGCCCGGTTGTTGAGACATTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005035845.1 True 135 mRNA 0.45 1 23683457 23683591

Neighbor

gene id symbol gene type direction distance location
LOC118938564 NA coding upstream 1812 23681520 ~ 23681645 (+)
LOC110485993 LOC106585727 coding upstream 15284 23611825 ~ 23668173 (+)
LOC110485992 LOC106585723 coding upstream 74851 23595876 ~ 23608606 (+)
pitpnc1a LOC106585713 coding upstream 95759 23511706 ~ 23591433 (+)
LOC110485985 LOC106585672 coding upstream 242212 23402396 ~ 23441245 (+)
LOC118938639 NA coding downstream 1250 23684841 ~ 23684975 (+)
LOC110486000 LOC106585772 coding downstream 45090 23728681 ~ 23754557 (+)
LOC110485999 tcpd coding downstream 78195 23761786 ~ 23772997 (+)
fam161a LOC106564865 coding downstream 99471 23783062 ~ 23789617 (+)
LOC110485112 LOC100380723 coding downstream 108062 23791653 ~ 23807108 (+)
G1155901 NA non-coding upstream 91307 23591897 ~ 23592150 (+)
G1155351 NA non-coding upstream 99750 23583489 ~ 23583707 (+)
G1155349 NA non-coding upstream 100918 23582316 ~ 23582539 (+)
G1155958 NA non-coding downstream 26736 23710327 ~ 23711035 (+)
G1156004 NA non-coding downstream 90618 23774209 ~ 23774491 (+)
G1156000 NA non-coding downstream 91022 23774613 ~ 23775018 (+)
G1156025 NA non-coding downstream 184479 23868070 ~ 23868285 (+)
G1156046 NA non-coding downstream 235880 23919471 ~ 23919674 (+)
G1155006 LOC100136012 other upstream 724106 22958932 ~ 22959351 (+)
c13h17orf67 LOC106564992 other upstream 1073178 22606256 ~ 22610371 (+)
G1154412 mcoln1 other upstream 1171717 22511379 ~ 22511740 (+)
G1156089 NA other downstream 315055 23998646 ~ 24003968 (+)
G1156247 NA other downstream 643192 24326783 ~ 24328963 (+)
G1157117 NA other downstream 1080511 24764102 ~ 24764346 (+)
G1157292 NA other downstream 1417949 25082584 ~ 25105138 (+)
LOC110486053 polr3f other downstream 1729518 25410869 ~ 25419361 (+)

Expression


Co-expression Network