LOC110486000 (LOC106585772)


Basic Information

Item Value
gene id LOC110486000
gene name LOC106585772
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 23728681 ~ 23754557 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021557274.2
GACCAACAAAAGCGAATGGATGCGGTGAGGAGAGGGAAGTCGCCCGAAATCTGGCTACATGTGACGTCACGAGATTTCCTTAGACCAAGCGGCAGCTGCTGAAGCTAGTCACAGAGCCGGGAGGACTGTCGCAGCAATTTCTGTCTACAAATGATTATTTTCGGACATTATAATTGGACGTAGCATCAGCAGCAATGGATACATCccggtttttcttcattttttatcactgactgactgttcTTTCCAAATATTTTGCTGCGTTGGAAGCACGCAAGCGCTCGAAGGGGGGGTGTCCCTAGCTATCGTTATTCGACTTGCCAGGCTGAGTCACCGCTGGAGTGCcttaagagagagagcgaaggaagACGTGGAGAGAAaggtagtgtgagagagagacggctaggggagtaaagacagagagtgagaggaaaaCGAGTGGCGAGGAGGTAgcagaaaggagaagagagagagagccaaggGAGTTGGGGAAAAAGAtggagtaagggagagagagagacaacacacagagacagagtgaggagagtgggtgtgtgtctgtggaagagaaagagacagcaagGTCAGGACTGctgaacccccccacccccttggGTCTGAGCGCTGGGCTGACGGTCAAGGCGACGCCACTATGAGTGACCAAAACGTTGTCAAGGAAGGCTGGGTTCAGAAGAGAGGTGAGTACATAAAGAACTGGAGGCCGCGCTACTTCCTGCTGAAGACAGACGGATCCTTCATCGGCTACAAAGACAAACCCCAGGACGCAGACCTGGCCTATCCCCTCAATAACTTCTCTGTAGCAAagtgtcagctgatgaagacaGAGAGGCCAAAGCCCAACACGTTCATCATCCGCTGTTTACAGTGGACAACGGTTATTGAGAGGACATTCCACGTGGACACGCCCGATGAGAGAGATGAGTGGGCCGAAGCCATCCAGATGGTGGCCGACTCCCTGGccaagcaggaggaggaggggatccTGTGCAGCCCCACGTCGCAGATCGAGAATGAGGTCAACGAGGAGGAGATGGACACCTCCACCAGCCAACACAAACGGAAGACAATGAATGACTTTGACTATCTGAAACTACTGGGAAAAGGCACTTTTGGGAAAGTCATTCTGGTGAAGGAGAAGGCGAGCGGAACTTATTACGCCATGAAGATCCTGAAGAAAGAAGTCATCATCGCCAAGGACGAAGTTGCTCACACCCTCACAGAAAGCAGAGTGTTGAAAAACACCCGGCATCCATTCCTAACATCTCTGAAGTACTCCTTTCAGACCAAGGACCGGTTGTGCTTTGTCATGGAGTATGTGAACGGAGGAGAGCTGTTTTTCCATTTGTCAAGAGAGCGAGTGTTTTCCGAGGACCGCACGCGATTCTACGGAGCTGAGATCGTCTCCGCTTTAGACTACCTTCACTCTGCCAAGATAGTGTACCGCGATCTGAAGCTGGAGAACTTGATGCTGGATAAAGACGGGCACGTCAAGATCACGGACTTCGGCCTCTGCAAAGAGGGCATCACCGACACGGCCACCATGAAGACCTTCTGCGGCACGCCAGAGTACCTGGCTCCAGAGGTGCTGGAGGACAATGACTACGGCCGGGCGGTGGACTGGTGGGGTCTGGGCGTGGTCATGTATGAGATGATGTGCGGTCGGCTGCCCTTCTACAACCAGGACCACGAGAAGCTGTTTGAGCTGATCCTCATGGAGGAGATCAAGTTTCCACGCACGCTCTCCTCCGACTCCAAGTCCCTGCTCTCCGGCCTGCTCATCAAGGACCCCAACAAACGACTCGGTGGCGGTCCAGACGATGCGAAGGAGATAATGCGCCACAGTTTCTTTGTGGCTATAGACTGGCAAGACGTCTACGACAAAAAGttGGTCCCCCCCTTCATGCCACAGGTCTCGTCAGAGACAGACACCCGGTATTTCGATGAGGAGTTCACGGCACAGACGATCACCATCACTCCCCCGGAGAAATACGATGAAGACGGAATGGGTGAGGGTGACAGTGAACGGAGGCCTCATTTCCCACAATTCTCGTATTCGGCCAGCGGACGAGAGTGAAGGTCattgccagccaaccagccagtatTGTCCCCCCCGTCCCGCCGTGCGTCCGTTTCGAGGAAAACACGTAGCCATTGTAGGAAAAGTCTCCCctcttttctccttctctgtATTCGAGTGCAGACTGGGAGAAGTTGTCTTTTTAGGGACTGTAAAAGGGGTTTTGCACAGTGGGATAGACTCAAGCTGGTCTCTCCACACAAAAAAAGTATCTTACATTTTCAACGCTATATACTGCAGAAGGCAATGTTTTTGTTATGTATTTTTATCCGTCAGTATTAGGTTGTCGACCTGTTACGTTCTTTGTCTTTTTAAAATTTTAGTTTGAACTTTTTTGCACTTGGTTTGGAAGAGCCGTTCTAGGGAACAAAACCAAAAATGTTGCCTTATGTGTGCAGATGTTTCGTATCATACAGACAGGGTTTAGGTCGGGGGGCTCGTGGTTCATTCAAACAATTATTTTTCTCATATACAATGCCATGGCGGTGCACATTCTCCAATCCCATGGAAAACGAGAGTCACTATCTgctaaaaacaacaaaaaagacaGAACTGACCGTTTCTTTCATTCCAATTTCATTGTCAGTGTTATTACTTTTCATCCTTTTTGACCTTTTCATTTTCTGCCAGAGATTTCTACTTGGTTATTGTTTGACAGAAACACTAAACTGCCAGATACTGCACGGTTCACTCAGGCAACACAGAGCACAACCGCATTCAACTCAGCTACCAGTTTAGCTTTACACACCCATCAGGGAAAAGCTACTATGAATATACAAGCCTTTTTTGCGTCTTTTTCCACAGTCATTTGATTAATAACTTATTTTCATAGCTATAGAAAAAATAGTGGTATAGATGTTTACACAAGGAATGTGGCTTATACAGGTCCACCTTATGCTGTCAtaacacacatgctcacacacacacacactctctaacaTCAGAGCCAGCTCTGAGCTCTGCTGATATGGCTTGTGACAGACTATGAAATCTGTATCTGTAAAAAAAATTGAATCTCCCCATCAATCTTCCCAAAGCGACAATGTGGGCGGAAGGCATCAATAATCAGTAACCATGTCGGGTCACAGATCACGTGTAACTGAGCCATGAATATACTTGTGTATGATGATATGATGAGGACTgtgagaatggagagagaaaaggaaagcaGTTCCCCCACGTTTTTTGATGTAAATATGCAATGCCTTTTTTTGTTCTTAGTGGCATCTTGGCCAGACATGAACTTTTGTGTGTGACTGTACTTCAAGCTTGCTGAGGAGAACCAAGACCGGAGGAAAAGGAAGACTGAGAATGACATTTTGGGTTAAAACAACGTAAACTACAACGTTAAAGACTGACTGGACGCTCCCATTTTGTGACTGGTGTCAGCGTCGCCTCGACCTGTCTTTCCAGAAGAGGTTTCCATGGAGACGAGACCCTTTTTCGCTGTTGGTCAAATAAATTGACACCCACTGTAATGTTTTCTTTTACCCGTTCAAGTGGGACCATGGtcaattctgcagtgatatgtgGTTACATCAGGTCGTTATCATTCCCTTCCTTTTTTGTACCATAGTACTAGATTTATTTATGTTTGTGTCATTCTAGGCAGTGTTACCCAGTCTTGTTCAGAGTCAAAAAGGCACCTCTCTTTAAGCCGCTGAAGGATGATATTGTTGGATGCATTACTAAAGTCTGTTTTTTATCCAATTGTTTTTTGGAttgtttgcttgtttgttttCTTACCAAAACATTAGGGCAAGAAACCAATAGTGAACTTGCAATGCCGTGGTAGTATTTATTTTGAATTAAATTAAAGAATACATTTCAGGGTT
>XM_036940650.1
GAGGGAAGTCGCCCGAAATCTGGCTACATGTGACGTCACGAGATTTCCTTAGACCAAGCGGCAGCTGCTGAAGCTAGTCACAGAGCCGGGAGGACTGTCGCAGCAATTTCTGTCTACAAATGATTATTTTCGGACATTATAATTGGACGTAGCATCAGCAGCAATGGATACATCccggtttttcttcattttttatcactgactgactgttcTTTCCAAATATTTTGCTGCGTTGGAAGCACGCAAGCGCTCGAAGGGGGGGTGTCCCTAGCTATCGTTATTCGACTTGCCAGGACATGAATTTAACCACAGAAGCTGTTCCTGAACTTGAATATGATTGTGGACCCAGAATTAAATCCCTTTATTAAAAAGGCTGAGTCACCGCTGGAGTGCcttaagagagagagcgaaggaagACGTGGAGAGAAaggtagtgtgagagagagacggctaggggagtaaagacagagagtgagaggaaaaCGAGTGGCGAGGAGGTAgcagaaaggagaagagagagagagccaaggGAGTTGGGGAAAAAGAtggagtaagggagagagagagacaacacacagagacagagtgaggagagtgggtgtgtgtctgtggaagagaaagagacagcaagGTCAGGACTGctgaacccccccacccccttggGTCTGAGCGCTGGGCTGACGGTCAAGGCGACGCCACTATGAGTGACCAAAACGTTGTCAAGGAAGGCTGGGTTCAGAAGAGAGGTGAGTACATAAAGAACTGGAGGCCGCGCTACTTCCTGCTGAAGACAGACGGATCCTTCATCGGCTACAAAGACAAACCCCAGGACGCAGACCTGGCCTATCCCCTCAATAACTTCTCTGTAGCAAagtgtcagctgatgaagacaGAGAGGCCAAAGCCCAACACGTTCATCATCCGCTGTTTACAGTGGACAACGGTTATTGAGAGGACATTCCACGTGGACACGCCCGATGAGAGAGATGAGTGGGCCGAAGCCATCCAGATGGTGGCCGACTCCCTGGccaagcaggaggaggaggggatccTGTGCAGCCCCACGTCGCAGATCGAGAATGAGGTCAACGAGGAGGAGATGGACACCTCCACCAGCCAACACAAACGGAAGACAATGAATGACTTTGACTATCTGAAACTACTGGGAAAAGGCACTTTTGGGAAAGTCATTCTGGTGAAGGAGAAGGCGAGCGGAACTTATTACGCCATGAAGATCCTGAAGAAAGAAGTCATCATCGCCAAGGACGAAGTTGCTCACACCCTCACAGAAAGCAGAGTGTTGAAAAACACCCGGCATCCATTCCTAACATCTCTGAAGTACTCCTTTCAGACCAAGGACCGGTTGTGCTTTGTCATGGAGTATGTGAACGGAGGAGAGCTGTTTTTCCATTTGTCAAGAGAGCGAGTGTTTTCCGAGGACCGCACGCGATTCTACGGAGCTGAGATCGTCTCCGCTTTAGACTACCTTCACTCTGCCAAGATAGTGTACCGCGATCTGAAGCTGGAGAACTTGATGCTGGATAAAGACGGGCACGTCAAGATCACGGACTTCGGCCTCTGCAAAGAGGGCATCACCGACACGGCCACCATGAAGACCTTCTGCGGCACGCCAGAGTACCTGGCTCCAGAGGTGCTGGAGGACAATGACTACGGCCGGGCGGTGGACTGGTGGGGTCTGGGCGTGGTCATGTATGAGATGATGTGCGGTCGGCTGCCCTTCTACAACCAGGACCACGAGAAGCTGTTTGAGCTGATCCTCATGGAGGAGATCAAGTTTCCACGCACGCTCTCCTCCGACTCCAAGTCCCTGCTCTCCGGCCTGCTCATCAAGGACCCCAACAAACGACTCGGTGGCGGTCCAGACGATGCGAAGGAGATAATGCGCCACAGTTTCTTTGTGGCTATAGACTGGCAAGACGTCTACGACAAAAAGttGGTCCCCCCCTTCATGCCACAGGTCTCGTCAGAGACAGACACCCGGTATTTCGATGAGGAGTTCACGGCACAGACGATCACCATCACTCCCCCGGAGAAATACGATGAAGACGGAATGGGTGAGGGTGACAGTGAACGGAGGCCTCATTTCCCACAATTCTCGTATTCGGCCAGCGGACGAGAGTGAAGGTCattgccagccaaccagccagtatTGTCCCCCCCGTCCCGCCGTGCGTCCGTTTCGAGGAAAACACGTAGCCATTGTAGGAAAAGTCTCCCctcttttctccttctctgtATTCGAGTGCAGACTGGGAGAAGTTGTCTTTTTAGGGACTGTAAAAGGGGTTTTGCACAGTGGGATAGACTCAAGCTGGTCTCTCCACACAAAAAAAGTATCTTACATTTTCAACGCTATATACTGCAGAAGGCAATGTTTTTGTTATGTATTTTTATCCGTCAGTATTAGGTTGTCGACCTGTTACGTTCTTTGTCTTTTTAAAATTTTAGTTTGAACTTTTTTGCACTTGGTTTGGAAGAGCCGTTCTAGGGAACAAAACCAAAAATGTTGCCTTATGTGTGCAGATGTTTCGTATCATACAGACAGGGTTTAGGTCGGGGGGCTCGTGGTTCATTCAAACAATTATTTTTCTCATATACAATGCCATGGCGGTGCACATTCTCCAATCCCATGGAAAACGAGAGTCACTATCTgctaaaaacaacaaaaaagacaGAACTGACCGTTTCTTTCATTCCAATTTCATTGTCAGTGTTATTACTTTTCATCCTTTTTGACCTTTTCATTTTCTGCCAGAGATTTCTACTTGGTTATTGTTTGACAGAAACACTAAACTGCCAGATACTGCACGGTTCACTCAGGCAACACAGAGCACAACCGCATTCAACTCAGCTACCAGTTTAGCTTTACACACCCATCAGGGAAAAGCTACTATGAATATACAAGCCTTTTTTGCGTCTTTTTCCACAGTCATTTGATTAATAACTTATTTTCATAGCTATAGAAAAAATAGTGGTATAGATGTTTACACAAGGAATGTGGCTTATACAGGTCCACCTTATGCTGTCAtaacacacatgctcacacacacacacactctctaacaTCAGAGCCAGCTCTGAGCTCTGCTGATATGGCTTGTGACAGACTATGAAATCTGTATCTGTAAAAAAAATTGAATCTCCCCATCAATCTTCCCAAAGCGACAATGTGGGCGGAAGGCATCAATAATCAGTAACCATGTCGGGTCACAGATCACGTGTAACTGAGCCATGAATATACTTGTGTATGATGATATGATGAGGACTgtgagaatggagagagaaaaggaaagcaGTTCCCCCACGTTTTTTGATGTAAATATGCAATGCCTTTTTTTGTTCTTAGTGGCATCTTGGCCAGACATGAACTTTTGTGTGTGACTGTACTTCAAGCTTGCTGAGGAGAACCAAGACCGGAGGAAAAGGAAGACTGAGAATGACATTTTGGGTTAAAACAACGTAAACTACAACGTTAAAGACTGACTGGACGCTCCCATTTTGTGACTGGTGTCAGCGTCGCCTCGACCTGTCTTTCCAGAAGAGGTTTCCATGGAGACGAGACCCTTTTTCGCTGTTGGTCAAATAAATTGACACCCACTGTAATGTTTTCTTTTACCCGTTCAAGTGGGACCATGGtcaattctgcagtgatatgtgGTTACATCAGGTCGTTATCATTCCCTTCCTTTTTTGTACCATAGTACTAGATTTATTTATGTTTGTGTCATTCTAGGCAGTGTTACCCAGTCTTGTTCAGAGTCAAAAAGGCACCTCTCTTTAAGCCGCTGAAGGATGATATTGTTGGATGCATTACTAAAGTCTGTTTTTTATCCAATTGTTTTTTGGAttgtttgcttgtttgttttCTTACCAAAACATTAGGGCAAGAAACCAATAGTGAACTTGCAATGCCGTGGTAGTATTTATTTTGAATTAAATTAAAGAATACATTTCAGGGTT

Function

NR:

description
RAC-gamma serine/threonine-protein kinase-like

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K04456 AKT; RAC serine/threonine-protein kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021557274.2 False 3933 mRNA 0.47 14 23728681 23754557
XM_036940650.1 True 3981 mRNA 0.47 15 23728712 23754557

Neighbor

gene id symbol gene type direction distance location
LOC110485995 ima2 coding upstream 42949 23679754 ~ 23685732 (+)
LOC118938639 NA coding upstream 43706 23684841 ~ 23684975 (+)
LOC118938638 NA coding upstream 45090 23683457 ~ 23683591 (+)
LOC118938564 NA coding upstream 47036 23681520 ~ 23681645 (+)
LOC110485993 LOC106585727 coding upstream 60508 23611825 ~ 23668173 (+)
LOC110485999 tcpd coding downstream 7229 23761786 ~ 23772997 (+)
fam161a LOC106564865 coding downstream 28505 23783062 ~ 23789617 (+)
LOC110485112 LOC100380723 coding downstream 37096 23791653 ~ 23807108 (+)
LOC118938619 NA coding downstream 45552 23800109 ~ 23800239 (+)
LOC118938607 NA coding downstream 49703 23804260 ~ 23804396 (+)
G1155958 NA non-coding upstream 17646 23710327 ~ 23711035 (+)
G1155901 NA non-coding upstream 136531 23591897 ~ 23592150 (+)
pitpnc1a LOC106585713 non-coding upstream 137248 23511706 ~ 23591433 (+)
G1155351 NA non-coding upstream 144974 23583489 ~ 23583707 (+)
G1156004 NA non-coding downstream 19652 23774209 ~ 23774491 (+)
G1156000 NA non-coding downstream 20056 23774613 ~ 23775018 (+)
G1156025 NA non-coding downstream 113513 23868070 ~ 23868285 (+)
G1156046 NA non-coding downstream 164914 23919471 ~ 23919674 (+)
G1156065 NA non-coding downstream 201693 23956250 ~ 23956539 (+)
LOC110485992 LOC106585723 other upstream 129678 23595876 ~ 23608606 (+)
G1155006 LOC100136012 other upstream 769330 22958932 ~ 22959351 (+)
c13h17orf67 LOC106564992 other upstream 1118402 22606256 ~ 22610371 (+)
G1154412 mcoln1 other upstream 1216941 22511379 ~ 22511740 (+)
G1156089 NA other downstream 244089 23998646 ~ 24003968 (+)
G1156247 NA other downstream 572226 24326783 ~ 24328963 (+)
G1157117 NA other downstream 1009545 24764102 ~ 24764346 (+)
G1157292 NA other downstream 1346983 25082584 ~ 25105138 (+)
LOC110486053 polr3f other downstream 1658552 25410869 ~ 25419361 (+)

Expression


Co-expression Network