fam161a (LOC106564865)


Basic Information

Item Value
gene id fam161a
gene name LOC106564865
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 23783062 ~ 23789617 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021557279.2
CAACCACACGACGCGTCGATGTTGCTCTGGAGAGCACCTGCTGTTCTTTTGATAGCGCTTGCCAAGTAGTTGTAGCGTCTCTACTACATTAAACTTTGACAAAGAAAGCAAGAACAGGGGAAACAATGGCGAATGCCCATCGCGCCAACGTCCTGGTTACCTCCTGTTTGAAAACGCCGGTAGACCCACATACCAAGGCTCCGTTGGCGTTGTATGAAAGGCAGCGAGCCCTTCCATGTTCGCCAGCAGCTGGTCGTATTGACAATCGAGACTACGAAAAAGAGCTGCAGTATGACGACTCGGGGTCTGAGTACGGTGATGGGGATGCCCCCGGGAAGGGCAGCCCCCTGATTATCAAAGACTACCGAGTGACAGGGGATCACATCGACTTGCGTGAGTTCTACTTCTCCAACGAGGAGTACTATCGTAAACTGGAGGAGCTGAAGAGGGCCCACCTTCGCACCATGGCCGAGCTAGAGGGCATGTACCGCAAGAAGCTGGAGCTCAAAAGCACACCACCCTCAGAAAATGTGCAGGGGGCACTGGCACACAGGTCGTACTTGAAGATCAGCCCCATGCCTGTGAGGCGTCTGAGGAAGGCCCACTCTGCTCTGGAGCTGAGGAGGGGCTCTGGGCTGTCGGACACATCTGACGAGGAAGGTACTGTCGACAACAATGTGGAGAAGGGTCTGCAGTCCTCCCCCAAAGAGCACATCAAGAACATGTGGCAGGACTTCAAGCTGTCACCTCGCAAGTGTCACCTGTCCACATCCTCCCACCAGAGCCTCATTGGGGACAACAAGAACGGCATCAAGGGTAAAGACCGGAAGCAAGGGCGAAAAGATGTCGAACACGAGACTTGGAAACCCAAAGTGACCGTCCCCAAGCCGTTCCACATGACGCTGCGGGAGAACCAGAAGCACCAGAAAGGTGTGAAGACACGGTCAGAGATTGAGCTGGAGAACACGGCCCTACGGAAGCAGCTGGAGGAGCTGACAGAGTGCCAGCACAAGTTCCGTGCCAGCTCCGTACCCGCCCACGTGCGCCTGCCCCTGTATGAGGAGCTCCAAGAACGCGACGAGGCACGGCGGGCCATGCGTGAGCGGGAGCAGCAGCGTCTGTGCTCCACCCAGCAGCCCTTCAGTTTCCTGGAGCGCGAACGTCTcaagagggagcagagagaggagcagctcCGCAACCTCCAGCCAAACAGCAAGGAGAGAGTCCAACCATTTAGGGCCAAGCCAGTGCCCAAGGCAGTGTATGAGGCGGCGTCGGGTGAGCAACTGAAGGAGGAGCAGCTGTACCGCGCCATCAAGATGCAGATGAGGGCCCAGGAGTTGCTCAACAGCGCCTCCATGCCACCCAGCATGCTTGCACGCCACCTTAGCGAAAGGAAGTGGGCCAAGGATGAAGCCAGTGGGGACACCGCTGGATTTGAGGATGACAACAGTGCCTCTTACAGGCCTAAGATAAATACGGAGGTGCCCGACTTCGACGCCAGCTACAGGAGGTTCAAGAAGCAGCTGGAGAGCCGGCGTGACGTGAAACCTTTGACGACGTGCGAGCCGTTCCAGCTCCGGACGTCACAGATCCCCTCGCACCGCGAACGCATCCTGGCCGACATCGAGAAGGAGCAGATGAGTCCGCGGGCCAAGCGCTGGCCTTACATCAGCATAACTGGGCATGTCCGTTCACACAACTCTAGCCTCTGCTCCTCCCTCTCAGGCAGTCTGGAACAGCTGCCTGCCAAAGTCACCGATGCCAGCAAAAAACGGCAAGAGGCCGTAAGAAAGGTACTTGAGCAGAGAAAGaaggcagaggaagaggaagcgagatggagtgagaggcagaagcagagagagaagaagcttGCGAAGGTGGTTTCGAAGCGCGCCCAGGCCAACGACACCCACGTGCCCCTCTCTCAGACCAACCAGTCCAAGCTCAAGCAGTTCAGAAAGCAGGACTTTCAGCGCAGGAAGGaatacagggaggagatgagggagatccaggagagagtgaaggggaggCCTCTGCTGTTGGAGCAGGTCGCACAGATGAATGCCAAACATGCTGCAGAGaagcactacacagacaccctGCGAGGCTGTGGAGTGAGTGAGGACTTTGTCAGTGGCAAGGTGCCCAAGTCCCAGCGGCCAGGTGGCCAAGACTCTGCATGCAGGACCTCCTTCTCCAGTGACTCCAAACAAAGTGACAAGGATGAGACCGATACACCAGCTATTTACAACACGGTCTTCCAGGATGACTACCCAGACAATTATGAAGACAGCTTTGCTGACCAAGAACTGGAAGGAGAGCAGGAGGCTGAGAAAGATGAATTAAAGtacatgaaagaggaggatgaaggccaTGACGAAGTAGGGCGGGAGAGGGAGGACATTGGGCGTTATTCAGATGATTGTGATTATTCAGATGACCATTACTCAGATGATGATGACCATTACTCAGATGCCAATGAGCATTACTTGCCCCTGGACGATGAAAAGAATGAAGGGAGTGACATCATCAAAAGGCCCAAGAGTACAGAGAGCAGCCCAAGCTATAGAAGCGGCCAGTACAGCCGAAACAGTCAGAAGTCAGAGAGTGATAGGGAAAACACCGCAATAGCAGACAAGAAAAATGACGAGGATGACTGAAAAGTCAAAGGAGTGCATTTTCTCACACGTAGGCGGACTACATTGTGCGCAAACGtctacaacactgacacacagtgGTAGAGATGCTTCTACTATAAAATATCCTACCATACATTTAGCCTatctgtctatatgtgtgtgtg

Function

NR:

description
protein FAM161A-like

GO: NA

KEGG:

id description
K16772 FAM161A; protein FAM161A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021557279.2 True 2806 mRNA 0.54 7 23783062 23789617

Neighbor

gene id symbol gene type direction distance location
LOC110485999 tcpd coding upstream 10065 23761786 ~ 23772997 (+)
LOC110486000 LOC106585772 coding upstream 28505 23728681 ~ 23754557 (+)
LOC110485995 ima2 coding upstream 97330 23679754 ~ 23685732 (+)
LOC110485112 LOC100380723 coding downstream 2036 23791653 ~ 23807108 (+)
LOC118938619 NA coding downstream 10492 23800109 ~ 23800239 (+)
LOC118938607 NA coding downstream 14643 23804260 ~ 23804396 (+)
LOC118938610 NA coding downstream 16169 23805786 ~ 23805910 (+)
LOC110486004 LOC106585779 coding downstream 18218 23807835 ~ 23865695 (+)
G1156000 NA non-coding upstream 8044 23774613 ~ 23775018 (+)
G1156004 NA non-coding upstream 8571 23774209 ~ 23774491 (+)
G1155958 NA non-coding upstream 72027 23710327 ~ 23711035 (+)
LOC110485993 LOC106585727 non-coding upstream 114897 23611825 ~ 23668173 (+)
G1155901 NA non-coding upstream 190912 23591897 ~ 23592150 (+)
G1156025 NA non-coding downstream 78453 23868070 ~ 23868285 (+)
G1156046 NA non-coding downstream 129854 23919471 ~ 23919674 (+)
G1156065 NA non-coding downstream 166633 23956250 ~ 23956539 (+)
G1156079 NA non-coding downstream 187417 23977034 ~ 23979017 (+)
G1156096 NA non-coding downstream 227008 24016625 ~ 24017093 (+)
LOC110485992 LOC106585723 other upstream 184059 23595876 ~ 23608606 (+)
pitpnc1a LOC106585713 other upstream 211282 23511706 ~ 23591433 (+)
G1155006 LOC100136012 other upstream 823711 22958932 ~ 22959351 (+)
c13h17orf67 LOC106564992 other upstream 1172783 22606256 ~ 22610371 (+)
G1154412 mcoln1 other upstream 1271322 22511379 ~ 22511740 (+)
G1156089 NA other downstream 209029 23998646 ~ 24003968 (+)
G1156247 NA other downstream 537166 24326783 ~ 24328963 (+)
G1157117 NA other downstream 974485 24764102 ~ 24764346 (+)
G1157292 NA other downstream 1311923 25082584 ~ 25105138 (+)
LOC110486053 polr3f other downstream 1623492 25410869 ~ 25419361 (+)

Expression


Co-expression Network