Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118938607 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 23804260 ~ 23804396 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005035815.1 | True | 137 | mRNA | 0.51 | 1 | 23804260 | 23804396 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938619 | NA | coding | upstream | 4021 | 23800109 ~ 23800239 (+) |
| fam161a | LOC106564865 | coding | upstream | 14643 | 23783062 ~ 23789617 (+) |
| LOC110485999 | tcpd | coding | upstream | 31263 | 23761786 ~ 23772997 (+) |
| LOC110486000 | LOC106585772 | coding | upstream | 49703 | 23728681 ~ 23754557 (+) |
| LOC118938639 | NA | coding | upstream | 119285 | 23684841 ~ 23684975 (+) |
| LOC118938610 | NA | coding | downstream | 1390 | 23805786 ~ 23805910 (+) |
| LOC110486004 | LOC106585779 | coding | downstream | 3439 | 23807835 ~ 23865695 (+) |
| LOC118938574 | NA | coding | downstream | 26988 | 23831384 ~ 23831517 (+) |
| LOC118938611 | NA | coding | downstream | 57060 | 23861456 ~ 23861588 (+) |
| LOC110486005 | comd1 | coding | downstream | 74085 | 23878481 ~ 23890527 (+) |
| G1156000 | NA | non-coding | upstream | 29242 | 23774613 ~ 23775018 (+) |
| G1156004 | NA | non-coding | upstream | 29769 | 23774209 ~ 23774491 (+) |
| G1155958 | NA | non-coding | upstream | 93225 | 23710327 ~ 23711035 (+) |
| LOC110485993 | LOC106585727 | non-coding | upstream | 136095 | 23611825 ~ 23668173 (+) |
| G1155901 | NA | non-coding | upstream | 212110 | 23591897 ~ 23592150 (+) |
| G1156025 | NA | non-coding | downstream | 63674 | 23868070 ~ 23868285 (+) |
| G1156046 | NA | non-coding | downstream | 115075 | 23919471 ~ 23919674 (+) |
| G1156065 | NA | non-coding | downstream | 151854 | 23956250 ~ 23956539 (+) |
| G1156079 | NA | non-coding | downstream | 172638 | 23977034 ~ 23979017 (+) |
| G1156096 | NA | non-coding | downstream | 212229 | 24016625 ~ 24017093 (+) |
| LOC110485992 | LOC106585723 | other | upstream | 205257 | 23595876 ~ 23608606 (+) |
| pitpnc1a | LOC106585713 | other | upstream | 232480 | 23511706 ~ 23591433 (+) |
| G1155006 | LOC100136012 | other | upstream | 844909 | 22958932 ~ 22959351 (+) |
| c13h17orf67 | LOC106564992 | other | upstream | 1193981 | 22606256 ~ 22610371 (+) |
| G1154412 | mcoln1 | other | upstream | 1292520 | 22511379 ~ 22511740 (+) |
| G1156089 | NA | other | downstream | 194250 | 23998646 ~ 24003968 (+) |
| G1156247 | NA | other | downstream | 522387 | 24326783 ~ 24328963 (+) |
| G1157117 | NA | other | downstream | 959706 | 24764102 ~ 24764346 (+) |
| G1157292 | NA | other | downstream | 1297144 | 25082584 ~ 25105138 (+) |
| LOC110486053 | polr3f | other | downstream | 1608713 | 25410869 ~ 25419361 (+) |
