actr2a (LOC106585927)


Basic Information

Item Value
gene id actr2a
gene name LOC106585927
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 24190053 ~ 24210340 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021557308.2
TGTGTAATATGGGCATGTGTCATACATTCCGGAAAAAGCCCTTTGCTAGAGCCGGGGTGCTGTTTTCCGCCTTGCCGAAGAAAGTTGTGCCTGGGAGGGTTGCTGGTTTTTGTATTCCGAGAAAATGGACAGCCAGGGAAGGAAAGTGGTGGTTTGCGACAATGGGACCGGGTTTGTGAAGTGCGGCTATGCAGGCTCCAACTTCCCAGAGCACATTTTCCCGGCGTTGGTTGGCAGGCCAATCATTCGCTCCACAGCTAAAGTGGGAAACATTGAGATCAAGgacCTGATGGTGGGGGATGAGGCGAGCGAGCTGCGCTCCATGCTGGAGGTGAACTACCCCATGGAGAATGGCATCGTGAGGAACTGGGACGACATGAAGCACCTGTGGGACTACACCTTTGGTCCCGAGAAGCTCAACATCGACTCACGCAACTGCAAGATCCTGCTCACCGAGCCGCCCATGAACCCAACCAAGAACCGCGAGAAGATCATTGAGGTGATGTTTGAGACGTACCAGTTCTCTGGGGTTTACATAGCCATCCAAGCTGTGCTCACACTCTATGCTCAAGgtCTCCTGACCGGCGTGGTGGTGGACTCTGGTGATGGCGTCACCCACATCTGCCCCGTGTACGAAGGCTTCTCCCTGCCCCACCTGACCCGACGCCTGGACATTGCAGGACGGGACATTACGCGCTACCTCATCAAGTTGCTGTTGCTGAGGGGCTACGCCTTCAACCACTCGGCGGACTTTGAGACGGTGCGCATGAtgaaggagaagctgtgctaCGTGGGCTACAACATCGAGCAGGAGCAGAAGCTGGCGCTGGAGACCACCGTGCTGGTTGAGTCCTACACGCTCCCCGACGGCAGGATGATCAAGGTGGGAGGGGAGCGGTTCGAAGCCCCTGAGGCTCTATTCCAGCCCCACCTCATCAATGTGGAGGGAGTCGGGGTGGCAGAGCTTCTCTTCAATACTATCAATGCAGCAGACATCGACACCAGGTCTGAGTTCTACAAACACATAGTGCTGTCAGGGGGCTCCACCATGTACCCTGGCCTTCCCTCTCGACTGGAGCGTGAGCTCAAGCAGCTCTACCTGGAGCGCGTGCTGAAGGGAGATGTGGATAAGCTCTCGAAATTCAAGATCAGGATCGAGGACCCCCCTCGGCGCAAGCACATGGTGTTCCTGGGTGGGGCCGTGCTGGCCGACATCATGAAGGACAAGGACAACTTCTGGCTGACAAGGGAGGAGTACCAGGAGAAGGGGGTGCGTGTCCTGGAGAAGCTGGGGGTCACTGTCAGATAAACCCCCCCCCAAGATGCACATGTCTGGGCTAAGTCtaaaatgggaccctattccctcattgcactacttttgaccacaccccatagggtagtgcactatctcgggaatagggtgccatttgggatgtagccttgGTCTTGtctcctgccctcctcctccgctACGTCCTCCACTTGATATCCATCTTACAGCTCACTACTTCGCGACCCGATCATCTGTTTTTACCACCCCTGTCCCAGATTCGCTCGCTCACTCTCCAAGGGCATGTTGTGACAGACGGTTGGGGAGGTGGGAGGAGATGGATGAGGTGCTGACAACATGTCTCCTGGGAATAGTTTCAATCACGTTGCCCAACTTATTCTGTCAAAACACGATCCCAATGATCATCAAGATGAAGTAAATTATTATTAGGGATTCATTTATAGAGGGGGTGTCGGATTCTCCTGTGTTGTGGGCACAGGGTACACAAGGGGCCTCCATCAAAGGCAAGCTGCCTTTTAAAATTGTTTTAATTCCACCCTTCTGCCTACCTTTTGTCTAGTCTTAATGAGCTGGTGATTTCTTGCTCCTCTTGAGGAGGTTGTGTTAATGTTGGGGGGAGGTCAGGGGGTGATGGTGGATCAGAGTGCAGGTGGTTTTCGGGGCATGTTTCTCCTTCTCACAGGGTCCACCTGCCCACTTGTCTGAATCCCATATCTAGTCTGTTGCCATTGTGTCGTAAGAGGGATGTGATGATGACAAAAAAAACGGTTGGCCTTCCCTCACGATTAAAAAAAGGCACTTCATTCCACTGATGGCTAAATATTTGCCATGTATTTAATTCCAATGAGGACTGCTCAGCCTTTTCTTTGAAGTCATGTTTTGTGCTCACATTAATTTTGCTGATGCGCTTTCCTTTTGGAGGAGAAGTGGTTTTGCCTTTCGTTTTGTCAGACGGACAAATAACgtcttgtattttttttttgcagtgcaTTACTccggtgttttttttcttctcgtaACGAGTGAGGATGTGTTGTCCTCATCATGGCTGTTGGACACACGAGTCATTCGGTTTTTAAGGTCTGGGTTACATTTTGCCCTCAACAGCAGGTCTAGGATCTCTATCCCAGGCCTATCCTTAACCATTGTGAGCTGAACAATTCATCAGACCTAGGACCAGTTGTTAAGGGCATACTGAACCGTAACCTGTTTAGAGGGGCAGTCATTCTGAGACCATTAGGAACTCTCCCTAGTCTCCGCTCCAGTGaagattcattttttttttttttttaggtcggGGGTTGTTGAACATTTGTAATATTAATAAGAATCATTAGACATGGAGACCACATAAAAGCTGGTATTTAAGGTTTTCCTTTTTTGGTTTTCATATGTATATGAACTTACACATATATTGTGTatcattttctttttttatccaAACAGTCATCCAGTGCCAAGTGCAGTTATTTtagctgttttttttgttttcttcatAGCATAACTGCCTACCGCTGATTTTTAAATAAAGCAAAGTGATTTATAAA

Function

NR:

description
actin-related protein 2-A isoform X2

GO: NA

KEGG:

id description
K17260 ACTR2, ARP2; actin-related protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021557308.2 True 2838 mRNA 0.49 9 24190053 24210340

Neighbor

gene id symbol gene type direction distance location
LOC110486014 LOC106585894 coding upstream 31100 24145212 ~ 24158953 (+)
LOC110486011 LOC106585850 coding upstream 123670 24049629 ~ 24066383 (+)
LOC110486012 LOC106585868 coding upstream 143375 24035212 ~ 24046678 (+)
LOC110486008 LOC106564858 coding upstream 199621 23984759 ~ 23990432 (+)
LOC110485113 NA coding upstream 268395 23914319 ~ 23921658 (+)
LOC110486019 LOC106585964 coding downstream 51607 24261947 ~ 24300246 (+)
LOC110486021 LOC106585998 coding downstream 106708 24317048 ~ 24321237 (+)
LOC118938548 NA coding downstream 161284 24371624 ~ 24373364 (+)
LOC110486025 LOC106586048 coding downstream 203180 24413520 ~ 24441284 (+)
esf1 LOC106564836 coding downstream 253992 24464332 ~ 24476087 (+)
G1156139 NA non-coding upstream 92209 24096092 ~ 24097844 (+)
G1156126 NA non-coding upstream 105320 24082688 ~ 24084733 (+)
G1156109 NA non-coding upstream 156462 24033386 ~ 24033591 (+)
G1156107 NA non-coding upstream 158920 24030913 ~ 24031133 (+)
G1156104 NA non-coding upstream 163155 24026675 ~ 24026898 (+)
G1156214 NA non-coding downstream 770 24211110 ~ 24211418 (+)
G1156216 NA non-coding downstream 3159 24213499 ~ 24213708 (+)
G1156219 NA non-coding downstream 7723 24218063 ~ 24218297 (+)
G1156220 NA non-coding downstream 10282 24220622 ~ 24220931 (+)
G1156222 NA non-coding downstream 11717 24222057 ~ 24222343 (+)
G1156089 NA other upstream 186085 23998646 ~ 24003968 (+)
LOC110485992 LOC106585723 other upstream 591050 23595876 ~ 23608606 (+)
pitpnc1a LOC106585713 other upstream 618273 23511706 ~ 23591433 (+)
G1155006 LOC100136012 other upstream 1230702 22958932 ~ 22959351 (+)
c13h17orf67 LOC106564992 other upstream 1579774 22606256 ~ 22610371 (+)
G1156247 NA other downstream 116443 24326783 ~ 24328963 (+)
G1157117 NA other downstream 553762 24764102 ~ 24764346 (+)
G1157292 NA other downstream 891200 25082584 ~ 25105138 (+)
LOC110486053 polr3f other downstream 1202769 25410869 ~ 25419361 (+)
G1157952 LOC106584892 other downstream 1252587 25462927 ~ 25463458 (+)

Expression


Co-expression Network