LOC110486030 (LOC106586106)


Basic Information

Item Value
gene id LOC110486030
gene name LOC106586106
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 24484604 ~ 24522503 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021557339.2
aaacatttccactgtacCTCTTTGCTTTCCGTACCCGATTCAATCGTCTTGGTTCGACAACTGTTTTTTTTAATGGCAAACTTGGTATTTTCGGCGTTGTGAATATTATTTATAACGACTACTGATGATACTAAAGACATTTTCAGAAGTTACTTCTGAGGATACAGTCGTACAGCTGTCAGCTTTGGTTGGAGTCTCATTTATCCAGCAGTTTCATTACGACAGCTTTTCtccgctgttgttgttgctagtgCGCACCACTCGCTAGCTAGTAGCACATCATTAGCTAGCCTGCCAACTAGACATCTACATTTCAAAAACttttctttgtttttgtctttcgTGGCGCGTTGCATTTGCATCAGTGATGATAAAAAACACGATACAATCCGCAGGACTTCTGGTTTTGTTGTGGTTGTTATTTGGGGACTTTGTTCTGGTTTGGTTTCACAACAGAGTCAAAACCGAAACGTACAACAACCAATATTCTTCCAAAGAAGATGCTTCTGACAGTCAAGACCAGAGCTGTTTTTGTCACTTGACAGGCGTCTTGGATGACTGCTTCTGTGACATCGAGAGCATTGATGTCTTCAACAACTTCAAAATCTACCCCCGCATTCAGAAGCTGACCGAGAGAGACTACTTCAGGTACTACAGGGTCAACCTGAATAGGCCCTGTCCCTTCTGGGCCGACGATAGCCACTGCTCCATCAAGGACTGCCAAGTGGAGCCCTGCCCAGAGaGCAAGATTCCAGTGGGAATAAAGTCTGGAAACTACAATAGGTATTCCCAGGTGGCCAACGCCAACACAGACATAGTAGATTGTGAACAAGCCCAAGACCTGGGGGCAATTAACAGCACCCTGAGcAACTATAGTAAAGAGGCCTTTGAGGACTGGGCCCGGCACGATGACGCACAGGACCACTTCTGTGAGCTGGATGATGAGACGTCACCAGATGCAGACTATGTGGACCTGCTCCTAAACCCGGAGCGCTACACTGGCTACAAGGGCCCCTCAGCCTGGAGAGTGTGGAACAGCATCTACGAGGAGAACTGCTTCAAGCCCAGATCAGTGTACCGGCCCCTTAACCCACTGGTTCCGCCCAGAGGAGGAGATGATGATGGCGAAGGCTTTTACAACTGGCTGGAAGGTCTGTGTTTGGAGAAGAGGGTATTCTACCGGCTCATATCTGGTCTCCACAGCAGCATAAACATCCACCTGTGTGCAGAGTACCTATTGGCCGAGGGCTGGGGCAAGTCCCTGTGGGGCCCCAATGTGCAGGAGTTCCGCCAGCGCTTCGACCCGGCCGAGACCAAGGGCGAGGGCACGCGGCGCCTTAAGAACCTCTACTTTCTCTACCTGATCGAGCTGCGTGCCCTCTCCAAGGTGGCGCCCTACTTCGATCGAGCCTTCGTCAACCTGTACACGGGCGACCATCAAGAGGACCAAGCCTCCAAAGAGTTACTGCTGCAGTTCTTCAACGAGACCAAAGCTTTCCCAATGCACTTTGACGAGAAGTCCATGTTTGCTGGGCAGAAGATCGAAGCAAAAACGTTGAAGGAGGAATTCCGgctacattttaaaaacatttcccGGATCATGGACTGTGTGGGCTGCAGTAAATGTCGACTCTGGGGGAAGCTACAGACCCAAGGGCTGGGCACGGCGTTGAAGATCCTCTTCTCTGAGAAGGAGATCAAGAACCTGCCGGAACACAGCCCCTCTAAGGGCTTCCAGCTGACACGCCAGGAGATAGTGGCCTTGCTCAATGGCTTTGGGAGGCTCTCCACAAGCATCCACCAGCTCCATAGTTTCCGCGCCTTGCTGAAGGAGAAGAGGTAACACCCCCCCATCAGCACTACCACCACCCGGCCACCAGGTGGAGCCAACCCAGAGGGAACTGCAATAGTCTTATTCCTCCCCAGAATAAGATCAAGTTCAGGGACTTCAGGATCGACACTGaacccccatcccctcctccttccttcttcctctatgtacaactctccttctctcctcttcctttccagAGAGCAACGGCACTCTAAGTCTGAGAAATCTGTACCTCTGTTTCCTTTCGTTGTTACTACTTTTGTGGATGAAAGTGTTCACTATGTCAGGCAGATTAGTTGTGAGCTAAACCCATCCTTGAGtgagtgtgggtgtatgtgtcTGTGCGAGTGTGTtattgaaggtgtgtgtgtgtgtgtgtgagaatactTATTTGTCGTTGATCGCCAGTTGCAGCTAAATGATAACGAGAACTAGGGATAACGAGAACTAGGATTCATTCCGTACTTTTACGAGCATAAACTTGATAAGCGCAGCTGCTTTTTCCTATCCTAGAGGTGTAACCTTTCTCTCTGTGAGTTAGTGCATCGGTTGAAAGAACGTCTATGTGAGCGACTATGTCTGCTTTTGCTTTTGTCTGTGCATTTAACTGTGCTGTATAAGGGGTGTTTTAACATCTCCATTTGGCAATCCAGTCTTTCTGCGCATCATATTATAAAAGCCTCATTTAAATGTgggaaaaaaataacaatttacAGATTGGGTATCTGTTGACCACGATACGCTTGCGTTACTTTTGTCATACCTATTCTATTCGGTGGCAGAACGGTTCCTGGTGTTTTTATTCTTATTTTATTGGTTTTATGAAAGTCGAGACTAGCCAGGGTGATGGCAATCCCAAATGTGTAAGAGTTGTTTCCATGGCAACGAAAAGCCACACCAGTATTTGTTTCATAGTTCACTTAAATAAGCTGTCATGCTGTGATGCTGCCATGTTGGAGAAGAGTACTGTTAAAGTATAATGGAGAATGTAGCCAATGGTGTGAGAAGAAGCAACTCGAAACAAGCAGTGGGGGTTTGTTCCCCCGTGATGGTCAAGTTCACTGGGGTGTCTTGGTGAGCTTGCCATGTAAATCAATTCAAAATGGATACACGTAATGGCATTTAACGTCACACAACCTTTTTATACTGTCATGCCCTTCAGGactgggacgataccagtatggcgatactcgttagtatcgtggcaaggaaacattAACATGAAGCGtgtttaacttctttaggaaaacagccctaacgTTCCACACACTATACATGTTTGATTTCTGTCTGAAGTAGGTATTTCTCCATGTGGACCAAAGATTTTATGTTGCCTTTTTTATTTTCTATCATGTCAAAGCACATTTGAGTTTTTCCACCATATAAGTTTTTAATTTGTGCATCATCACCCCCTTCGGTAACATTGGGTAGAAAATGTTGCAAGTGAGGTTCGCCTTATGTGTAAAGATCAAACTATTGGTAGCCAGACAATACCTGGGTAATACTTTGTATCACATTTTTGTAAAAGAAAATCTCGATCCAATCAAGCAAAGGTAGACATGGGGTCCAGTAAGTAGGATTTGAGTCAAGTGCTAGCTAGCTGACGCTTATGCTAACATAAAGAGCAACGCTAATGTCGCCGTGAATGTGAATGCTATGGAGATTGAACAAGCTGTTCCTTTGCTTAAAGTGAAGGAAATAGACAAGATAATATTTTATCTTAGAGGAaaagcgtgtgtgtctgtctgggactCGCATGCTTTCTAAAAACCCAGAACGTCCTGTGCAATCCACTTGTCTGCCTTAAAAGTTCCAAAAAATtgttttgaaaaaaataattaaaaaagcTTGAGCCTGCTTTCTTGGATGAAATTCACCATTTTGTCTCCAATGATCTCCACGCTCTTCTGCTTTCTCCTATCTCTGCCTTTGTAACATATTCAGAATACCCAGAAAGTTGTACTATTTGTAAAAGGAAAATGACAGAACTTTTTTCAAAGCTGTATGATTATATAATTAGTTGCACCTGTATTGATGTGTATTCTTGTTTGATTATATTTATtagaacagaggaataaatattTCTGGTTGTCATTCAAAACTTTTTATGCATCTTTTTCAGATTTGTACCATAATCCATTATGTACAAACACTTTCAGAACAATACTATTTGACCTCACCGTAACAGAAAGGTATACTATatacccctcaaactcaactcggGACCTCAAAACCAGTTACACTGTGggttttttcattgttcccccttaatcagggactgatttagacctgggacactaaGTGGGTGCAATTAATTCAGGTAGaatagaaaaccagcaggctctggacctcgtaaGGTAAAATTTGAATACACCttaatttaatattttatttttaccaatAAACCATGAAAAGGGTTCTGTTATTGGGACTTGTTCTGACCTTTCCTATCATAAAGTAGATTGTAGACAATGTTGGGGTACAATTCCGTTTCATCTAGTGACTAAATCAAGAACAGTAGGATGCCCTCACATTGAGTGTCACACCCCAAATGTCCTTTTATTCATTGGTTATGTGTCAATACCGATCACGATACATCCACAGACAGAAAAGCAGACAAATAAATAGAGCATCTGATCAGTGAAACTTTCTCCATTACATTAAAAACTTCCTGTTAGAAATATAGAATCCATCTTTTTCACCATCGCATCGCCAATAAATGTATGTTCAGTCATATTCatatttactgtggatatagatatgaCATGATTTTGTTTGTGTCATTGTTCTATACAGGCTTTAGTATATTGATATTGTCTAAGGTCAACTACCTTGATGTATATGTTTGTGCATGACTTAGTGCTAGCTTATAATATGGGTTTATTTCACAGGTTTTCTGGATGACTTTCTAAAATGTCTAgctggttcccaaactgtggggtgGTCGATAGGGGGatgcagagttttt
>XM_021557340.2
GTCATCCCATCAACTCTGGCAAACTCTCACCTGTCCATTGAAGTAGACTTCAGCTGTCCCTTTAGGGACATAAAAGACAGAGATATTCTCATAAGCCTGGTCTTAGTTTTGTGATTTAAAACTGCTGTTAAAGATAGCAGCTCCTCAGAGAAATAGGCAAATGAAACTATATTTTTAATAAACAACAAGGGAAACCACTCAAAGGTTTTGAATTCACCGGCATGCTCAGAGGACTTTGTTACTTATGGACGGCTTCACTGCTTCCCATCACATTCTCTGGACGGCTACACTCAGAGTTGACAGGCGTCTTGGATGACTGCTTCTGTGACATCGAGAGCATTGATGTCTTCAACAACTTCAAAATCTACCCCCGCATTCAGAAGCTGACCGAGAGAGACTACTTCAGGTACTACAGGGTCAACCTGAATAGGCCCTGTCCCTTCTGGGCCGACGATAGCCACTGCTCCATCAAGGACTGCCAAGTGGAGCCCTGCCCAGAGaGCAAGATTCCAGTGGGAATAAAGTCTGGAAACTACAATAGGTATTCCCAGGTGGCCAACGCCAACACAGACATAGTAGATTGTGAACAAGCCCAAGACCTGGGGGCAATTAACAGCACCCTGAGcAACTATAGTAAAGAGGCCTTTGAGGACTGGGCCCGGCACGATGACGCACAGGACCACTTCTGTGAGCTGGATGATGAGACGTCACCAGATGCAGACTATGTGGACCTGCTCCTAAACCCGGAGCGCTACACTGGCTACAAGGGCCCCTCAGCCTGGAGAGTGTGGAACAGCATCTACGAGGAGAACTGCTTCAAGCCCAGATCAGTGTACCGGCCCCTTAACCCACTGGTTCCGCCCAGAGGAGGAGATGATGATGGCGAAGGCTTTTACAACTGGCTGGAAGGTCTGTGTTTGGAGAAGAGGGTATTCTACCGGCTCATATCTGGTCTCCACAGCAGCATAAACATCCACCTGTGTGCAGAGTACCTATTGGCCGAGGGCTGGGGCAAGTCCCTGTGGGGCCCCAATGTGCAGGAGTTCCGCCAGCGCTTCGACCCGGCCGAGACCAAGGGCGAGGGCACGCGGCGCCTTAAGAACCTCTACTTTCTCTACCTGATCGAGCTGCGTGCCCTCTCCAAGGTGGCGCCCTACTTCGATCGAGCCTTCGTCAACCTGTACACGGGCGACCATCAAGAGGACCAAGCCTCCAAAGAGTTACTGCTGCAGTTCTTCAACGAGACCAAAGCTTTCCCAATGCACTTTGACGAGAAGTCCATGTTTGCTGGGCAGAAGATCGAAGCAAAAACGTTGAAGGAGGAATTCCGgctacattttaaaaacatttcccGGATCATGGACTGTGTGGGCTGCAGTAAATGTCGACTCTGGGGGAAGCTACAGACCCAAGGGCTGGGCACGGCGTTGAAGATCCTCTTCTCTGAGAAGGAGATCAAGAACCTGCCGGAACACAGCCCCTCTAAGGGCTTCCAGCTGACACGCCAGGAGATAGTGGCCTTGCTCAATGGCTTTGGGAGGCTCTCCACAAGCATCCACCAGCTCCATAGTTTCCGCGCCTTGCTGAAGGAGAAGAGGTAACACCCCCCCATCAGCACTACCACCACCCGGCCACCAGGTGGAGCCAACCCAGAGGGAACTGCAATAGTCTTATTCCTCCCCAGAATAAGATCAAGTTCAGGGACTTCAGGATCGACACTGaacccccatcccctcctccttccttcttcctctatgtacaactctccttctctcctcttcctttccagAGAGCAACGGCACTCTAAGTCTGAGAAATCTGTACCTCTGTTTCCTTTCGTTGTTACTACTTTTGTGGATGAAAGTGTTCACTATGTCAGGCAGATTAGTTGTGAGCTAAACCCATCCTTGAGtgagtgtgggtgtatgtgtcTGTGCGAGTGTGTtattgaaggtgtgtgtgtgtgtgtgtgagaatactTATTTGTCGTTGATCGCCAGTTGCAGCTAAATGATAACGAGAACTAGGGATAACGAGAACTAGGATTCATTCCGTACTTTTACGAGCATAAACTTGATAAGCGCAGCTGCTTTTTCCTATCCTAGAGGTGTAACCTTTCTCTCTGTGAGTTAGTGCATCGGTTGAAAGAACGTCTATGTGAGCGACTATGTCTGCTTTTGCTTTTGTCTGTGCATTTAACTGTGCTGTATAAGGGGTGTTTTAACATCTCCATTTGGCAATCCAGTCTTTCTGCGCATCATATTATAAAAGCCTCATTTAAATGTgggaaaaaaataacaatttacAGATTGGGTATCTGTTGACCACGATACGCTTGCGTTACTTTTGTCATACCTATTCTATTCGGTGGCAGAACGGTTCCTGGTGTTTTTATTCTTATTTTATTGGTTTTATGAAAGTCGAGACTAGCCAGGGTGATGGCAATCCCAAATGTGTAAGAGTTGTTTCCATGGCAACGAAAAGCCACACCAGTATTTGTTTCATAGTTCACTTAAATAAGCTGTCATGCTGTGATGCTGCCATGTTGGAGAAGAGTACTGTTAAAGTATAATGGAGAATGTAGCCAATGGTGTGAGAAGAAGCAACTCGAAACAAGCAGTGGGGGTTTGTTCCCCCGTGATGGTCAAGTTCACTGGGGTGTCTTGGTGAGCTTGCCATGTAAATCAATTCAAAATGGATACACGTAATGGCATTTAACGTCACACAACCTTTTTATACTGTCATGCCCTTCAGGactgggacgataccagtatggcgatactcgttagtatcgtggcaaggaaacattAACATGAAGCGtgtttaacttctttaggaaaacagccctaacgTTCCACACACTATACATGTTTGATTTCTGTCTGAAGTAGGTATTTCTCCATGTGGACCAAAGATTTTATGTTGCCTTTTTTATTTTCTATCATGTCAAAGCACATTTGAGTTTTTCCACCATATAAGTTTTTAATTTGTGCATCATCACCCCCTTCGGTAACATTGGGTAGAAAATGTTGCAAGTGAGGTTCGCCTTATGTGTAAAGATCAAACTATTGGTAGCCAGACAATACCTGGGTAATACTTTGTATCACATTTTTGTAAAAGAAAATCTCGATCCAATCAAGCAAAGGTAGACATGGGGTCCAGTAAGTAGGATTTGAGTCAAGTGCTAGCTAGCTGACGCTTATGCTAACATAAAGAGCAACGCTAATGTCGCCGTGAATGTGAATGCTATGGAGATTGAACAAGCTGTTCCTTTGCTTAAAGTGAAGGAAATAGACAAGATAATATTTTATCTTAGAGGAaaagcgtgtgtgtctgtctgggactCGCATGCTTTCTAAAAACCCAGAACGTCCTGTGCAATCCACTTGTCTGCCTTAAAAGTTCCAAAAAATtgttttgaaaaaaataattaaaaaagcTTGAGCCTGCTTTCTTGGATGAAATTCACCATTTTGTCTCCAATGATCTCCACGCTCTTCTGCTTTCTCCTATCTCTGCCTTTGTAACATATTCAGAATACCCAGAAAGTTGTACTATTTGTAAAAGGAAAATGACAGAACTTTTTTCAAAGCTGTATGATTATATAATTAGTTGCACCTGTATTGATGTGTATTCTTGTTTGATTATATTTATtagaacagaggaataaatattTCTGGTTGTCATTCAAAACTTTTTATGCATCTTTTTCAGATTTGTACCATAATCCATTATGTACAAACACTTTCAGAACAATACTATTTGACCTCACCGTAACAGAAAGGTATACTATatacccctcaaactcaactcggGACCTCAAAACCAGTTACACTGTGggttttttcattgttcccccttaatcagggactgatttagacctgggacactaaGTGGGTGCAATTAATTCAGGTAGaatagaaaaccagcaggctctggacctcgtaaGGTAAAATTTGAATACACCttaatttaatattttatttttaccaatAAACCATGAAAAGGGTTCTGTTATTGGGACTTGTTCTGACCTTTCCTATCATAAAGTAGATTGTAGACAATGTTGGGGTACAATTCCGTTTCATCTAGTGACTAAATCAAGAACAGTAGGATGCCCTCACATTGAGTGTCACACCCCAAATGTCCTTTTATTCATTGGTTATGTGTCAATACCGATCACGATACATCCACAGACAGAAAAGCAGACAAATAAATAGAGCATCTGATCAGTGAAACTTTCTCCATTACATTAAAAACTTCCTGTTAGAAATATAGAATCCATCTTTTTCACCATCGCATCGCCAATAAATGTATGTTCAGTCATATTCatatttactgtggatatagatatgaCATGATTTTGTTTGTGTCATTGTTCTATACAGGCTTTAGTATATTGATATTGTCTAAGGTCAACTACCTTGATGTATATGTTTGTGCATGACTTAGTGCTAGCTTATAATATGGGTTTATTTCACAGGTTTTCTGGATGACTTTCTAAAATGTCTAgctggttcccaaactgtggggtgGTCGATAGGGGGatgcagagttttt

Function

NR:

description
ERO1-like protein beta isoform X2

GO:

id name namespace
GO:0006457 protein folding biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0005783 endoplasmic reticulum cellular_component
GO:0003756 protein disulfide isomerase activity molecular_function
GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor molecular_function

KEGG:

id description
K10976 ERO1LB; ERO1-like protein beta

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021557339.2 False 4802 mRNA 0.43 16 24484604 24522503
XM_021557340.2 True 4560 mRNA 0.44 16 24485916 24522503

Neighbor

gene id symbol gene type direction distance location
esf1 LOC106564836 coding upstream 8517 24464332 ~ 24476087 (+)
LOC110486025 LOC106586048 coding upstream 43320 24413520 ~ 24441284 (+)
LOC118938548 NA coding upstream 111240 24371624 ~ 24373364 (+)
LOC110486021 LOC106585998 coding upstream 163367 24317048 ~ 24321237 (+)
LOC110486019 LOC106585964 coding upstream 184358 24261947 ~ 24300246 (+)
LOC110486033 LOC106564832 coding downstream 32442 24554945 ~ 24624188 (+)
LOC110486034 LOC106586144 coding downstream 184644 24707147 ~ 24719985 (+)
LOC110486038 LOC106586164 coding downstream 381548 24904051 ~ 24996436 (+)
LOC110486039 LOC106586175 coding downstream 525338 25047841 ~ 25065592 (+)
iip iip coding downstream 549049 25071552 ~ 25072676 (+)
G1156334 NA non-coding upstream 82242 24401574 ~ 24402362 (+)
G1156314 NA non-coding upstream 83823 24400482 ~ 24400781 (+)
G1156301 NA non-coding upstream 104322 24380073 ~ 24380282 (+)
G1156299 NA non-coding upstream 105891 24378484 ~ 24378713 (+)
G1156296 NA non-coding upstream 109472 24374789 ~ 24375132 (+)
G1156377 NA non-coding downstream 21092 24543595 ~ 24544417 (+)
G1156385 LOC100135918 non-coding downstream 103603 24626106 ~ 24655031 (+)
G1156386 LOC100135918 non-coding downstream 132572 24655075 ~ 24658914 (+)
G1156384 NA non-coding downstream 140624 24663127 ~ 24669484 (+)
G1156424 NA non-coding downstream 158076 24680579 ~ 24680927 (+)
G1156247 NA other upstream 155641 24326783 ~ 24328963 (+)
G1156089 NA other upstream 480636 23998646 ~ 24003968 (+)
LOC110485992 LOC106585723 other upstream 885601 23595876 ~ 23608606 (+)
pitpnc1a LOC106585713 other upstream 912824 23511706 ~ 23591433 (+)
G1155006 LOC100136012 other upstream 1525253 22958932 ~ 22959351 (+)
G1157117 NA other downstream 241599 24764102 ~ 24764346 (+)
G1157292 NA other downstream 579037 25082584 ~ 25105138 (+)
LOC110486053 polr3f other downstream 890606 25410869 ~ 25419361 (+)
G1157952 LOC106584892 other downstream 940424 25462927 ~ 25463458 (+)
G1157972 NA other downstream 950619 25473122 ~ 25473978 (+)

Expression


Co-expression Network