Item | Value |
---|---|
gene id | LOC100135918 |
gene name | LOC106586139 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048577.1 |
NCBI id | CM023231.2 |
chromosome length | 73332040 |
location | 24626147 ~ 24673336 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
complement C3-like |
id | name | namespace |
---|---|---|
GO:0045087 | innate immune response | biological_process |
GO:0006956 | complement activation | biological_process |
GO:0010466 | negative regulation of peptidase activity | biological_process |
GO:0052548 | regulation of endopeptidase activity | biological_process |
GO:0005576 | extracellular region | cellular_component |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036940683.1 | False | 5389 | mRNA | 0.46 | 36 | 24626147 | 24662371 |
XM_021557344.2 | False | 5494 | mRNA | 0.47 | 41 | 24626147 | 24673336 |
XM_036940682.1 | True | 5201 | mRNA | 0.46 | 35 | 24630890 | 24673336 |
24,620,000
24,630,000
24,640,000
24,650,000
24,660,000
24,670,000
24,680,000
24,690,000
24,700,000
24,710,000
24,720,000
NC_048577.1
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110486032 | LOC106586122 | coding | downstream | 77168 | 24543462 ~ 24548979 (-) |
LOC110486031 | LOC106586117 | coding | downstream | 97040 | 24522069 ~ 24529107 (-) |
btbd3a | btbd3 | coding | downstream | 144070 | 24476084 ~ 24482077 (-) |
LOC110486029 | ndufaf5 | coding | downstream | 162037 | 24452016 ~ 24464110 (-) |
LOC110486026 | snrpb2 | coding | downstream | 212628 | 24403833 ~ 24413519 (-) |
LOC110485115 | tbce | coding | upstream | 21294 | 24694630 ~ 24710664 (-) |
LOC110486035 | LOC106586159 | coding | upstream | 46676 | 24720012 ~ 24726010 (-) |
LOC110486036 | LOC106564826 | coding | upstream | 161953 | 24835289 ~ 24839255 (-) |
LOC110486037 | mlp3c | coding | upstream | 228849 | 24902185 ~ 24903303 (-) |
trnaa-ugc-58 | NA | coding | upstream | 329250 | 25002586 ~ 25002659 (-) |
G1157016 | NA | non-coding | downstream | 54442 | 24570984 ~ 24571705 (-) |
G1157015 | LOC106586133 | non-coding | downstream | 55471 | 24570438 ~ 24570676 (-) |
G1157014 | LOC106586133 | non-coding | downstream | 56110 | 24569755 ~ 24570037 (-) |
G1157009 | NA | non-coding | downstream | 61220 | 24564681 ~ 24564927 (-) |
G1157006 | NA | non-coding | downstream | 65856 | 24560079 ~ 24560291 (-) |
G1157073 | NA | non-coding | upstream | 2486 | 24675822 ~ 24676106 (-) |
G1157077 | NA | non-coding | upstream | 7794 | 24681130 ~ 24681350 (-) |
G1157084 | NA | non-coding | upstream | 15749 | 24689085 ~ 24689318 (-) |
G1157087 | NA | non-coding | upstream | 20708 | 24694044 ~ 24694458 (-) |
G1157012 | NA | other | downstream | 59185 | 24566639 ~ 24566962 (-) |
G1156864 | NA | other | downstream | 325915 | 24298919 ~ 24300232 (-) |
LOC110486013 | LOC106585880 | other | downstream | 537155 | 24086694 ~ 24134220 (-) |
LOC110485996 | LOC106586353 | other | downstream | 918960 | 23699036 ~ 23707634 (-) |
G1156460 | LOC106585723 | other | downstream | 1024457 | 23599507 ~ 23601690 (-) |
G1157522 | ifm3 | other | upstream | 398150 | 25071149 ~ 25103009 (-) |
G1157525 | NA | other | upstream | 403811 | 25077147 ~ 25080569 (-) |
G1160103 | NA | other | upstream | 1274754 | 25948090 ~ 25951532 (-) |
G1160105 | NA | other | upstream | 1276136 | 25949472 ~ 25951268 (-) |
G1160215 | NA | other | upstream | 1491421 | 26164757 ~ 26170670 (-) |