iip (iip)


Basic Information

Item Value
gene id iip
gene name iip
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 25071552 ~ 25072676 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001124613.1
CTAAATTTCTCGTTTGCACTAGaagctttgattatttttttAACACGAGGCTAAATAAGTAGCTATATTCGCTTGCCATGGATCAACCACCACCGTACCAGCCAGAGTTTGTCCCAATGAAAGGAAATAAGTACATGCGTCTTGAAGACACTCACGGAGCGCCCAAGTTCCAACATACCGTCGTCTTGGGACAGCCACAGCCCGTTGTACCTCATCCCAGGGATCACATTATCTGGTCACTTTGCAGCCTCGTGTACTGCAACCCATTCTGTCTCGGAATGTTAGCGGTGTATTTCTCCATAAAGTCGAGGGATAGGAAGATGGTTGGAGACTTGGAGGGAGCAAGAAAACACGGGAAGACTGCATGCTGCTTTAATACTGTGACTCTGACTTTGGCAATCCTCGGGCTGCTCTTCTTCTTCATCACCTATGGTATCATCATCTACCAAGTTGCACACTGAGGAGATCCAGTCTTTgcttttgtaattttttttaaatttgaagTCTTGGCAGGTGTTATACATCTCTAGGATTGTGTCCTGATACATTTCAGCTCATCTCTTTAATACACACACGCCACAGATGTTCCTTCAGCACTGTGTACCAGATCTTATTTGCTCTTCTTTAGTTTTGTGTTTTAAGGACGCAAGATGATTTTTTTGAAGTTCCATTCAAGTGTAATTTTTTTATGAATAAATTAAACCTTTTTGTAAATGCA

Function

NR:

description
interferon inducible protein

GO:

id name namespace
GO:0009607 response to biotic stimulus biological_process
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001124613.1 True 718 mRNA 0.42 2 25071552 25072676

Neighbor

gene id symbol gene type direction distance location
LOC110486039 LOC106586175 coding upstream 5960 25047841 ~ 25065592 (+)
LOC110486038 LOC106586164 coding upstream 75116 24904051 ~ 24996436 (+)
LOC110486034 LOC106586144 coding upstream 353015 24707147 ~ 24719985 (+)
LOC110486033 LOC106564832 coding upstream 447364 24554945 ~ 24624188 (+)
LOC110486030 LOC106586106 coding upstream 549049 24484604 ~ 24522503 (+)
LOC110486040 ifm3 coding downstream 17889 25090565 ~ 25091740 (+)
LOC118938245 NA coding downstream 20869 25093545 ~ 25104730 (+)
ifm3 ifm3 coding downstream 28848 25101524 ~ 25102652 (+)
LOC110486044 LOC106586224 coding downstream 68523 25141199 ~ 25143963 (+)
LOC110486045 s5a2 coding downstream 95489 25168165 ~ 25188384 (+)
G1157309 NA non-coding upstream 529 25070642 ~ 25071023 (+)
G1157286 NA non-coding upstream 45087 25026262 ~ 25026465 (+)
G1157284 NA non-coding upstream 47718 25023473 ~ 25023834 (+)
G1157282 NA non-coding upstream 49890 25021366 ~ 25021662 (+)
G1157266 NA non-coding upstream 74081 24997259 ~ 24997471 (+)
G1157292 NA non-coding downstream 9908 25082584 ~ 25105138 (+)
G1157617 NA non-coding downstream 119682 25192358 ~ 25192584 (+)
G1157643 NA non-coding downstream 123669 25196345 ~ 25196646 (+)
G1157653 NA non-coding downstream 133787 25206463 ~ 25206703 (+)
LOC110486047 tmem63b non-coding downstream 148140 25220536 ~ 25319211 (+)
G1157117 NA other upstream 307206 24764102 ~ 24764346 (+)
G1156247 NA other upstream 742589 24326783 ~ 24328963 (+)
G1156089 NA other upstream 1067584 23998646 ~ 24003968 (+)
LOC110485992 LOC106585723 other upstream 1472549 23595876 ~ 23608606 (+)
pitpnc1a LOC106585713 other upstream 1499772 23511706 ~ 23591433 (+)
LOC110486053 polr3f other downstream 340433 25410869 ~ 25419361 (+)
G1157952 LOC106584892 other downstream 390251 25462927 ~ 25463458 (+)
G1157972 NA other downstream 400446 25473122 ~ 25473978 (+)
LOC110516920 LOC106578598 other downstream 783956 25813029 ~ 25872772 (+)

Expression


Co-expression Network