Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110486044 |
| gene name | LOC106586224 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 25141199 ~ 25143963 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| protein dpy-30 homolog isoform X1 |
| id | description |
|---|---|
| K14965 | DPY30; protein dpy-30 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021557359.2 | False | 822 | mRNA | 0.45 | 5 | 25141199 | 25143963 |
| XM_036940688.1 | True | 483 | mRNA | 0.42 | 5 | 25141569 | 25143963 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938245 | NA | coding | upstream | 36469 | 25093545 ~ 25104730 (+) |
| ifm3 | ifm3 | coding | upstream | 38547 | 25101524 ~ 25102652 (+) |
| LOC110486040 | ifm3 | coding | upstream | 49459 | 25090565 ~ 25091740 (+) |
| iip | iip | coding | upstream | 68523 | 25071552 ~ 25072676 (+) |
| LOC110486039 | LOC106586175 | coding | upstream | 75607 | 25047841 ~ 25065592 (+) |
| LOC110486045 | s5a2 | coding | downstream | 24202 | 25168165 ~ 25188384 (+) |
| LOC110486047 | tmem63b | coding | downstream | 76573 | 25220536 ~ 25319211 (+) |
| LOC110486051 | LOC106584925 | coding | downstream | 218866 | 25362829 ~ 25376936 (+) |
| LOC118938060 | NA | coding | downstream | 246533 | 25390496 ~ 25392938 (+) |
| LOC110486052 | LOC106584902 | coding | downstream | 252168 | 25396131 ~ 25404252 (+) |
| G1157292 | NA | non-coding | upstream | 54789 | 25082584 ~ 25105138 (+) |
| G1157309 | NA | non-coding | upstream | 70176 | 25070642 ~ 25071023 (+) |
| G1157286 | NA | non-coding | upstream | 114734 | 25026262 ~ 25026465 (+) |
| G1157284 | NA | non-coding | upstream | 117365 | 25023473 ~ 25023834 (+) |
| G1157282 | NA | non-coding | upstream | 119537 | 25021366 ~ 25021662 (+) |
| G1157617 | NA | non-coding | downstream | 48395 | 25192358 ~ 25192584 (+) |
| G1157643 | NA | non-coding | downstream | 52382 | 25196345 ~ 25196646 (+) |
| G1157653 | NA | non-coding | downstream | 62500 | 25206463 ~ 25206703 (+) |
| G1157667 | NA | non-coding | downstream | 178264 | 25322227 ~ 25322831 (+) |
| G1157117 | NA | other | upstream | 376853 | 24764102 ~ 24764346 (+) |
| G1156247 | NA | other | upstream | 812236 | 24326783 ~ 24328963 (+) |
| G1156089 | NA | other | upstream | 1137231 | 23998646 ~ 24003968 (+) |
| LOC110485992 | LOC106585723 | other | upstream | 1542196 | 23595876 ~ 23608606 (+) |
| LOC110486053 | polr3f | other | downstream | 269146 | 25410869 ~ 25419361 (+) |
| G1157952 | LOC106584892 | other | downstream | 318964 | 25462927 ~ 25463458 (+) |
| G1157972 | NA | other | downstream | 329159 | 25473122 ~ 25473978 (+) |
| LOC110516920 | LOC106578598 | other | downstream | 712669 | 25813029 ~ 25872772 (+) |
| G1158563 | NA | other | downstream | 966533 | 26110496 ~ 26115864 (+) |
