XLOC_030243


Basic Information

Item Value
gene id XLOC_030243
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 35515920 ~ 35527121 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00061743
TTCCGGTTCACGGATTAGAAGGCACAGCCGAGCGTGTACATTTGaattaagtttgttttgttttacaagcTTCTTAGAATAGAATCTGAAAGTTATTTTTGCGTACGTACTTTTAATGAGATATGATGAGTATATTATGAGTAGCCTAATAGAGCAGCAAGTTTCATTTAGAAGCTATAGGCTATTTGTTCAGGAAATCACGTTAGGAGGAGGTTCTGTTTGAAGTATATTTtggagcaaacaaacaaaactggcAAACTGTCTAAAACCATCAGGCCTGAGGGTGCACTGGAGTCGGAGCCCAGACATTGTGGGATATTTCTGGCTTGTATGTCTGAAGGTCTGGGCTGCTG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00061743 True 353 lncRNA 0.40 2 35515920 35527121

Neighbor

gene id symbol gene type direction distance location
XLOC_030242 fbp1b coding upstream 7832 35458190 ~ 35508088 (+)
XLOC_030241 ptger4b coding upstream 114352 35398745 ~ 35401568 (+)
XLOC_030240 CR377210.1 coding upstream 388906 35121048 ~ 35127014 (+)
XLOC_030239 foxd1 coding upstream 516367 34997763 ~ 34999553 (+)
XLOC_030238 ankra2 coding upstream 528647 34981584 ~ 34987273 (+)
XLOC_030244 ar coding downstream 34486 35561607 ~ 35679140 (+)
XLOC_030245 yipf6 coding downstream 217502 35744623 ~ 35754882 (+)
XLOC_030246 stard8 coding downstream 259020 35786141 ~ 35867256 (+)
XLOC_030247 C5HXorf56 coding downstream 428088 35955209 ~ 35970951 (+)
XLOC_030248 NA coding downstream 476840 36003961 ~ 36177578 (+)
XLOC_030237 BX530075.1 non-coding upstream 594009 34920395 ~ 34921911 (+)
XLOC_030236 NA non-coding upstream 678754 34828804 ~ 34837166 (+)
XLOC_030234 NA non-coding upstream 718569 34643447 ~ 34797351 (+)
XLOC_030249 NA non-coding downstream 740411 36267532 ~ 36275169 (+)
XLOC_030250 NA non-coding downstream 802621 36329742 ~ 36409783 (+)
XLOC_030253 CU571324.1 non-coding downstream 978352 36505473 ~ 36506619 (+)
XLOC_030265 NA non-coding downstream 1315565 36842686 ~ 36849000 (+)
XLOC_030235 NA non-coding upstream 784478 34721137 ~ 34731442 (+)

Expression


Co-expression Network