LOC110486052 (LOC106584902)



Basic Information


Item Value
gene id LOC110486052
gene name LOC106584902
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 25396131 ~ 25404252 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_021557367.2
gcttagcatctgcttcatctgaccacttttttattgatctagtcaccagtgcttcctgctttagtttttgcttgtaagcaggaatcaggaggatggaattatagtcagatttgccaaatggagggcgagggagagctttgtttgCATCTAATTTATTTAGTTTTACTTCGTGTTTTATGTCCAgaatatttgcaaattattattactactatgaATTGCATAATTGTTTACATCGATTAGTTCTACTGTCTCCAGAGTCGGTACCCTGCTCGGTACTCTACTCCACAGCCTAAACTAATCGACACATTTTTGAGATGTCCTGTGCTGTGCTAACGTTATCCAACTCCTAGTTTAGCAATTTTCTGTGTCTCCAAACTACATGCAATACCAGATCGCTAGCTATGTATACAACCACTAAAGTTGTACTAGGCGTTTCTGAGATACTTACGGTGAGCACCGTTGCAGGAGTGCATCTCAAGCAAAACTGGGACCAAGAGGATTAGAGTGTCTGACTCCACCTGGTGATGATGGAAAGTGGTGGTGAGCAGAGGGGCCAAGTGGAAGATGAGGCCATGTGCACCTCTGCCTCGGAGGGGCTGGAGGAGGGTGAGGTGGAGGGTGAGACGCTGCTCATCGTGGAGTCGGAAGACCAAGCCTCGGTGGATCTCTCGCACGACCAGAGCGGTGACTCGCTCAACAGCGATCTGGGGGAGGACGCCGAGGGTGGCTGGAACGAGGACATGGCTTTCTACTGCGACAAGTGCCACAAGTGGATCCCCATCGCTCAGCTGCACGGAGAGCAACCCAGCTACCTGAAAGGAGACAACTTCTTTAAGTTCACCTGCTATGACTGTACAGAAGATGTCAAGGAGACCTTTGAGAGGATGAGACTCACCTGGCAACAGGTGGTTATGTTGGCCATGTACAACCTTTCTTTGGAGGGCACGGGGCGTCAAGGCTACTTTAGATGGAAAGAGGACATCTGTGCCTTTATTGGGAGACACTGGACCTTCCTACTGGGCACCAGAAAGAAGACTTCCACATGGTGGAGCACGGTGGCGGGCTGTTTGTCGGTGGGGAGCCCCACGTTCTTCCGCTCAGGGGCCCAGGAGTTTGGCGAGCCGGGCTGGTGGAAGCTGGTGCAGAACCGTCCACCCACCCTGCGCCCAGATGGAGACAAGTCCTCGGTGGCCTCCCTAAAATCTAAAGCTGCCTCCAAGCCAACCCTGGACCCCATCATCACGGTAGAAGGCTTACGGAAGCGCGTGGGCCGGAATCCGGTGGAAAGCGCCATGCAGCTGAAAGAAAAGCGCTCACGCACCCACGAGGCTAAGGACATCCGGCGGGCGCAGAAGGAGGCGGCGGGGTACATGGATCACAGCGCCTCCTCCACGGCTGTCAAGTTCAGCGGCCGTGGTGGCGGGCGGAGACCCGACTTGGTCCTGGAGAAAGGCGAGGTGGTGGACTTCTCCTCAATGAGCTCATCGGACCGAACACCACTCACCAGCCCCTCGCCGTCGCCCTCTCCGGACTTCTCTGCACCCGGCACCCCCGCCTCCCACTCAGCAACGCCCAGCCTGCTGTCGGAGGCTGACCTCATCCCTGACGTCATGCCACCGATGGCGCTCTTTCACGATGACGAGGAGCTGGACGGCGAAGGCGTCATCGATCCCGGCATCGAGTACATCCCCTCACCCAGTATGTCCCTGGGCACTGGCGCCCTTGTCGTTCGCAAAAAGCTGCGGCCTGGGGTGGCAGGGGCGCACATcaagcaggaagcagagagtgaCGACGAGGAGGGCCGCGGCCGGGATGATGAAGACGACGAGAGGCGGGGGCGCGGCGAAGGCCAATCCAATGTGGTCAGGGGGGCGCggggtggtggggagaggaggaggggggcctTAACAGAGAAGGGGAAGGGTTCCCCCCCTTCAGAGCCCCAGTTTGCCCCCCTCAGCCTGTATGAGGAGCGTGTGCTGCTGCGGCGCCTGGAGGCTTGTCCGCAAGCGCTGGCGGTGACTGCGCAGGCCAAGCGGCTGCACAGGAAGCTACTGGTGAGGAAGGCCAAGCGCCAGAGAGGGCTCCCCCTGCTGGACATCGACCAGGTGGTCAGCGCCACCCTCAGTCTGGTGGGAGGGTTGTACGGGTCCCAGGAGGGGGGACAGGGCCGCTACGAGGGCTCCGGCGCGGGGAAGTACCGCACCACCAGCCAGGACCTCCGAATCCTCGACCGCTTCCAGACAACGGTGTCCAGCAGAAGAGGGTACCACCAGCCCACAGTGTCCTTCTGGCACCGCCTCATGGGCTCCGACGCCAGCGTAGACCAAGGCATCAAGAGCCCGTACACCTCCCGCACCCTCAAACCCTTCATAAGGAGGGACTATGAGAACAAGCCTATGAAGCTGAAGCTGTTGGCGGAGATCCGTGCCTACCCCCACAGGAAGGACCCCTGCTGGGTCACCAAGCCAGAGGCCCCCATCGACTACTGTTACGTCAGGCCCAACCACATCCCCTCTGTTAACTCCATGTGCCACGACATCTTCTGgccagGTGTGGATCTCTCTGAGTGTCTCCAGTACCCAGACTTCAGCGTAGTGGTCCTTTATAAGAAGGTGGTGATCGGCTTTGGGTTCATGGTGCCGGACGTGAAGTACAACGAGGCCTACATCTCCTTCCTGCTGGTGCATCCCGAGTGGAGGAGGGCTGGGATCGCTACATTCATGATCTACCATCTCATTCAGACCTGCATGGGAAAAGACGTCACTCTACACGTCTCGGCCAGTAACCCCGCCATGCTCCTATACCAGAAGTTTGGCTTCAAGACTGAGGAGTACATATTGGACTTTTACGACAAATACTACCCGCTGGACAGCAAGGAGTGCCGACACGCCTTCTTCCTGCGGCTACGGCGGTGAGACAGGAAACGGGACAGGCCAGTATTCaggccatagaaatataattactagaatggACATGCCCATGTAAGTTAACGTTCCATTGGTGAACTGGTATCCATATTGAGTGTACTAGTCAAATTGTCGTTGTCTGTGGAGCTTTGTCTGTTGTAGTGTTTATATTTCTATACAGGCAACCAGTCAGAAGGAGGAAAAAATACATCTGGAAATGCCTGTGCTATTCAGTGTATCCATTTTATGTTACACCGTTTCTTTGTGGTCATTATATTTGTGAGAACCTATGAGGTAGGTGTATTTTTGTTGATCCACAAAAGAGACTGAAGGACGGAATTTTGTAATTTTCTTACACTTGCATTTCTGAATAATTCTGCAGTCCAAATGGCAATTATATAAAGAAAAAATCACTCACATTGCAAA

Function


NR:

description
cysteine-rich protein 2-binding protein-like

GO: NA

KEGG:

id description
K24537 KAT14; cysteine-rich protein 2-binding protein

RNA


RNA id representative length rna type GC content exon number start site end site
XM_021557367.2 True 3335 mRNA 0.55 11 25396131 25404252

Neighbor


gene id symbol gene type direction distance location
LOC118938060 NA coding upstream 3193 25390496 ~ 25392938 (+)
LOC110486051 LOC106584925 coding upstream 20030 25362829 ~ 25376936 (+)
LOC110486047 tmem63b coding upstream 76920 25220536 ~ 25319211 (+)
LOC110486045 s5a2 coding upstream 207747 25168165 ~ 25188384 (+)
LOC110486044 LOC106586224 coding upstream 252168 25141199 ~ 25143963 (+)
LOC110486053 polr3f coding downstream 6617 25410869 ~ 25419361 (+)
LOC110486054 LOC106564778 coding downstream 36863 25441115 ~ 25455367 (+)
LOC110486056 LOC106584953 coding downstream 95548 25499800 ~ 25607402 (+)
LOC118938061 NA coding downstream 407626 25784839 ~ 25866420 (+)
LOC110516919 NA coding downstream 441031 25845283 ~ 25849666 (+)
G1157761 NA non-coding upstream 9764 25385588 ~ 25386367 (+)
G1157759 NA non-coding upstream 11765 25384051 ~ 25384366 (+)
G1157758 NA non-coding upstream 16036 25379773 ~ 25380095 (+)
G1157744 NA non-coding upstream 18294 25377129 ~ 25377837 (+)
G1157772 NA non-coding downstream 1742 25405994 ~ 25406197 (+)
G1157779 NA non-coding downstream 12233 25416485 ~ 25417210 (+)
G1157784 NA non-coding downstream 18946 25423198 ~ 25423683 (+)
G1157785 NA non-coding downstream 20737 25424989 ~ 25425323 (+)
G1157788 NA non-coding downstream 25279 25429531 ~ 25429979 (+)
G1157292 NA other upstream 290993 25082584 ~ 25105138 (+)
G1157117 NA other upstream 631785 24764102 ~ 24764346 (+)
G1156247 NA other upstream 1067168 24326783 ~ 24328963 (+)
G1156089 NA other upstream 1392163 23998646 ~ 24003968 (+)
LOC110485992 LOC106585723 other upstream 1797128 23595876 ~ 23608606 (+)
G1157952 LOC106584892 other downstream 58675 25462927 ~ 25463458 (+)
G1157972 NA other downstream 68870 25473122 ~ 25473978 (+)
LOC110516920 LOC106578598 other downstream 452380 25813029 ~ 25872772 (+)
G1158563 NA other downstream 706244 26110496 ~ 26115864 (+)

Expression



Co-expression Network