LOC118938455


Basic Information

Item Value
gene id LOC118938455
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 26253826 ~ 26255885 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005035734.1
agcagcagctgactgcccagttcaaggtcagttcaccgtctcacctcatactgtattggaacAGCAGCAGCTGACTTGATCGTTGATGCTAATCATCATGttttgaatctgagagtaaatggatccgaccacaactctaaaAATGAAGGGTTCAACTGGAGTTGTTCTCAGATCCCCTAAGAACCGTAGGGTTCTTggtcaatgaaaaacagccccaaaaggttcttcaaagaacttgtTAGAAGGTGGATTCATCGAGGAACCTCCGTTGTTGCTGGACTTCTTCCGGGAACTTCGCAATTACAACTGAAAACGATGATCTTCTCAGAAATGAATCAAGTCCATGGAATGGATAAAGACAAAAAGACAATTCAAGGACTATCAGAGGTAGAGAGGCGAGGCAGGGATTTCACCGCTCTTCACTCCTTTACTGCACATCGGCGGAAATCCATTTCACCACGAGAGTGAAATCCCGCTGGCCTTTGATGGGGAGAACATCCACGCCCTCGAGGACGTCTCCATGGGACTTGGGGCTCTGCTAGGGCTGGATTTTTTATTTTCCCTTAAATTTCCCCCAAATGTCAGAAAAACACTTATGTTGTTAATTAAGTTACTGTGTTCTGGGGAGAAGAGAAGTTGGGGTGAAGTTACCAGGGCCGGTCATAAAGATGGCAAACTTCCTAACACAACTAAGTGAATATGATATACACACTAAAGCTAAAAAAATTGTATTTAGCATCAAGTCAACAATATTGTTAGTTTACCTATGATTCATTTATAATGTTTTTATTGTAccccattatttattttttaaatgtcatgAAAAGCTCTATACAaagtaaatgtattatttattatggtCTGACATGTTTGCAGAAATGTTGCAATTTTGTAATGTGTTTTGATTGGTCaattgttttgtaaatattaATTCACGTTTGTGGTGCCACTAA

Function

NR:

description
PREDICTED: sterile alpha motif domain-containing protein 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005035734.1 True 953 mRNA 0.40 3 26253826 26255885

Neighbor

gene id symbol gene type direction distance location
LOC110487402 NA coding upstream 98596 26141541 ~ 26155230 (+)
LOC110487386 LOC106595012 coding upstream 158150 26087931 ~ 26095676 (+)
LOC110487373 LOC106608452 coding upstream 172908 26058164 ~ 26080918 (+)
LOC110487393 NA coding upstream 187492 26058706 ~ 26066334 (+)
LOC118938446 LOC106595012 coding upstream 205768 26044982 ~ 26048058 (+)
LOC110487414 samd3 coding downstream 47517 26303402 ~ 26314343 (+)
LOC110487384 NA coding downstream 117935 26373820 ~ 26379952 (+)
LOC110485120 NA coding downstream 176428 26432313 ~ 26449529 (+)
LOC118938436 NA coding downstream 208620 26464505 ~ 26472221 (+)
LOC110487396 NA coding downstream 247134 26503019 ~ 26514208 (+)
G1158650 NA non-coding upstream 16321 26237066 ~ 26237505 (+)
G1158640 NA non-coding upstream 26501 26221082 ~ 26227325 (+)
G1158562 NA non-coding upstream 114688 26128783 ~ 26139138 (+)
G1158539 NA non-coding upstream 168697 26072261 ~ 26085129 (+)
G1158376 NA non-coding downstream 1940 26257825 ~ 26671072 (+)
G1158349 NA non-coding downstream 9091 26264976 ~ 26807861 (+)
G1158411 NA non-coding downstream 60562 26316447 ~ 26542441 (+)
G1158714 NA non-coding downstream 131928 26387813 ~ 26389650 (+)
G1158723 NA non-coding downstream 146689 26402574 ~ 26480917 (+)
G1158612 LOC106586052 other upstream 36432 26163799 ~ 26217394 (+)
G1158563 NA other upstream 137962 26110496 ~ 26115864 (+)
LOC110516920 LOC106578598 other upstream 382423 25813029 ~ 25872772 (+)
G1157972 NA other upstream 779848 25473122 ~ 25473978 (+)
G1157952 LOC106584892 other upstream 790368 25462927 ~ 25463458 (+)
LOC110487383 LOC106564416 other downstream 853240 26977083 ~ 27174368 (+)
LOC110485126 NA other downstream 1034352 27285432 ~ 27291404 (+)
G1158342 NA other downstream 1237269 27493154 ~ 27768641 (+)
LOC110485129 LOC106591690 other downstream 1520234 27768154 ~ 27788573 (+)
G1159435 NA other downstream 1524337 27780222 ~ 27786165 (+)

Expression


Co-expression Network