LOC118938064


Basic Information

Item Value
gene id LOC118938064
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 26848690 ~ 26872255 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036939728.1
tattgtttcaccatgtaggagcagtatagacctagtctgttcatgatatacatctacatgatgtattgtttcaccatgtaggagcagcatggacctacagtagctagctacttaTTTAGATTTAGTTTGACTTAATTAAACTGCTTTAAATGTGCTGTAGTAAACATTTTTTATTCTCAATAATCAATCAACACATTCCTGTCTTTTGTATGTCTCAATATAATAGGCGACGCTGCcagcgtgacgtataatctagtggacggttcTTCAGAAACAGCTCGtcaaccacctcggtagcttgctagccaacatagCCGAAAGATTCAAGATATTTATATGCTTTCGATGTATTTATATGCTTTCGGTGTACACACTTCTGTCGTATCTACTTGTTAACCTATTTGATATTACGTAGTTTTTTATTAGTCAGCTATAGTAGctggctggttaagttagcactAGCCTAGTCGCtaatgatagctagctaacatccccgaccatgagcTCCCTAAACTACTCTCCTCCTgttaaagaagaggaggatggacggagaaagaagctcaggggctgaacattgtcgtgaaagaggaggagaaagaagaggatgtcacagtaaaacaagaagtaTAAGGTGaggctattacagtgaaagaagaagagaaagacgtttcagtggaagaggaggaggatgttacagtaaaagaagaggaggatgcagTTTTTGGAGTGAAGAAGGAAggggagattactgtcacattgaaagatgaagaggtggagataggagatctgattaacaccagagagtcaGGACTACCGTGggtcctctggggagcctcaacaacatcatgatgCTGACAAGGCAGAGAAGAATCTCTCCACATCAGAACATCTTAATAAGAAACACCCGCAGAGATCCACAGGGAAGAAACCTCGCTGCTGCTCTGATGgtgggaagagattcacctcCTCAGCAAGCATTATAATTCATCAGAGAATCCACACAgtagagaaaccttatagctgtactcaatgagGGAATAGTTTTTCTCATTAAACCAGCCtgacatcacaccagagaacacacacaggaatgtTATCTTATATCtgtagctgtggtcaatgtgggaagagttttactcggCTAAGCAGCCTGATATCACACAAGAGAACACACTCAGGAGAGAAACCGTATAGCTGTAatgaatgtgggaagagttttattaACCTTAGCAGCCTGATGTCAcaccagaggacacacacaggagagaaaccttatagctgtactTAATGTGGGAAAAGTTTTGTTCAATCTGGCAATCTGacagtacaccagagaacacacacaggagataaatATTAtatctgtgatcaatgtgggaagagttattTTTACAGCTGGCCATCTGACTGCACACCAGAGAGCACACACAGGAGAGACAtcttatagctgtaatcaatgtgacaagagatactctgtctgatcaaacatcagaaaatacatgaaagagttgtttcatgatatcaatgaattAATGTCAATGTTGAATGTTAAGACTTTGTAGTAAGAGTATTttaataatgtcacaatgtagaagccTAAACGTTTGCCCCCTTATCTtttgatttcaacatgatatggatattagcctcagaaaaaatccaggctctgaattgaaagagTACTATTTATGTGATTTAACAAAAAGTGACAAACACAAAAAGAGCTGTGTTGCACTTACCATgttggtgacccacttgaatcaaaatgcaacacttctAAATGTAGAGATCTGTTTTATAcaaattgtcctctaaccagtgatgtacacattattcccagattacgtgtggtttttgagctgttagtttCATCTATATGTGCAACCTCATCTCCCTCATCTTGCACAATTGATTTTAACACGATATCGATGAGTTATGACAAATAAGTGTTGTGTTCTTTGTTTAGCGACCCCTACATATAAATGCATCactccaaaatgtagctgactgtcttctgcaggttgtctTCTAACCAGTGATCTAAAAGATATCTCCCATTTTTAaatgttagtttcaacagcaaaTACAACCTAATCTCCCCCCTAATCAATATCAGTGAGTTATTGCTACTTGTCAAAACAACAGTGTTTTTGGTGCTTGTGTCCATGGAGAGGACAACTTGGTTTCTGATTGTCTCAAGGTTGGGCAGTCAAAAAGATTTGTGTTTAGCCTGTGTGTTCCATGGAACACAAATTATTTGGAATTTCTGTATTCGAGATGAGTTGTGTTTGGGCTCGTTCCAAggggacgagagttctagaagctagtgagttttaggaagatgagagttctagaagctagtgggttttaggaagggaaaaaatacatgttttttttcttgtttttaattgttgaTAGCCAGTAGACACCATGTTTATATTGTTGAAGGTGAAGCATTTTAGTTGATTATATtgtgaaatggaagttgttttctgttggtggtgcGCATTCTTTTAAGGTGTTACAGtctggtttttccatttatgttttgaggttggactttagcacgtATAGCTCGTTAGCGCGTATAGCTCGTTAGTATGTAGGacgcactgattggtgtcacctagttagtcagtatgtgttacacctgtgctggcttgtccatcttgttagtgggaaggtgtttcacctgagctggtccaggttctatttaagagtgtctggcccaatGCTCCAGTTGtgttgatagatgtggagagtcaacacctttagttgctCCACCTTTTTGATTAAAATATGTTTTCATTCCAAGTTGAAGCTTCTTTCTGAAGAgagcttatttttttaaatgaatcaaTACAAGCAAACAAGATCGGTTCCGGGGATTGGTATGGCAAATACCTTACGATTTGCCTGGACTGAAAATGAGATGGAGCCGTGGAGTAGAGAGACATTTGGAAGGACTATTTTGATGGGATGCCTCAGGATAGAGGTGAAGGAAGTGCTCTGCCTTCAAGGGAACCCGAATGAGAAGGCTTTCGATGTGACGTTTCACAAAGAAGAAAAACACGACGAAGTAATGAAGATGGCAAAGGAAGCTGAGAAAACGGGACCCCTGTGCCATTATGCGGTGACCAGCCTGGCGAAGAACAACTTCAGGGTGGTCACCGTAACCATGTACAATCCGCACGTGAAAGAtgaagaggtgagggcctttctggggaggtacATGGACAATGTCTCCTCAGCGAGGTACCTCAGGGACTTCCTGGGTTTCTGGAACGGGAGAAGAGGGTTCCAGGCGTTACTCAGGGAGTCCCCGAAGAGTGTggatggctacctccatcctccggcgatgttctccctgggggctgacaggggaacACTCTACTATGCCCGTCAGCCCCCGTTCTGCAGGCGTTGTATGGCCTACGGCCATATCCTGGCCTTGTGCAGTGCCAAGAGGTGTCGATTTTGTGGGTCGGAAGAGCACGAGGCCAAGGAATGTGACGAGCCCAAGGCTTGCCACGGGTGTGGCTCAAGAGCACACCTGTGGCGTGATTGCCCGGCTCGTCACAGGTCATACGCGTCTGCAGCTGGGGGGGgagcgggggatggggggaggaaagagaggacgcATGCGGATTGTACGGATGGCACAGGGGAAAGGACGGAGAAGGACGAAGAGgcgaaaagaaagaggagagaagatggaaaGAAGGAAAAAGAAGGAGAGATTAAAAAGAAGGTGGAAGAACGTGGAGGAGCAGAGAAGGGGACAAGAGCTAGATGA

Function

NR:

description
PREDICTED: zinc finger CCHC domain-containing protein 3-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036939728.1 True 3796 mRNA 0.43 3 26848690 26872255

Neighbor

gene id symbol gene type direction distance location
LOC118938063 NA coding upstream 31155 26813566 ~ 26817535 (+)
LOC110487360 NA coding upstream 95983 26704020 ~ 26753678 (+)
LOC110487400 NA coding upstream 158096 26675239 ~ 26690594 (+)
LOC110487357 LOC106588926 coding upstream 292698 26549419 ~ 26555992 (+)
LOC118936356 NA coding upstream 313670 26529494 ~ 26535361 (+)
LOC110485124 NA coding downstream 103695 26975950 ~ 26979233 (+)
trnak-uuu-6 NA coding downstream 175172 27047427 ~ 27047499 (+)
LOC110487383 LOC106564416 coding downstream 236623 26977083 ~ 27174368 (+)
LOC118938484 NA coding downstream 271241 27143496 ~ 27146545 (+)
LOC110487391 NA coding downstream 373421 27245676 ~ 27257780 (+)
G1158349 NA non-coding upstream 40829 26264976 ~ 26807861 (+)
G1158946 NA non-coding upstream 58732 26789143 ~ 26789958 (+)
G1158909 NA non-coding upstream 153283 26694244 ~ 26695407 (+)
G1158376 NA non-coding upstream 177618 26257825 ~ 26671072 (+)
G1158998 NA non-coding downstream 26158 26898413 ~ 26918768 (+)
G1159030 NA non-coding downstream 70499 26942754 ~ 26949886 (+)
G1159034 NA non-coding downstream 78773 26951028 ~ 27052827 (+)
G1159041 NA non-coding downstream 101731 26973986 ~ 26974313 (+)
G1158612 LOC106586052 other upstream 631296 26163799 ~ 26217394 (+)
G1158563 NA other upstream 732826 26110496 ~ 26115864 (+)
LOC110516920 LOC106578598 other upstream 977287 25813029 ~ 25872772 (+)
G1157972 NA other upstream 1374712 25473122 ~ 25473978 (+)
G1157952 LOC106584892 other upstream 1385232 25462927 ~ 25463458 (+)
LOC110485126 NA other downstream 417982 27285432 ~ 27291404 (+)
G1158342 NA other downstream 620899 27493154 ~ 27768641 (+)
LOC110485129 LOC106591690 other downstream 903864 27768154 ~ 27788573 (+)
G1159435 NA other downstream 907967 27780222 ~ 27786165 (+)

Expression


Co-expression Network