LOC110487371


Basic Information

Item Value
gene id LOC110487371
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 28074969 ~ 28077602 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110487371
CATGGCTACGCTGTTGGCATCACCTTTTACAGtggatttctgctgttgtggCCCTGtaaccatctgtctgactttgttgttcacacaggagagagacgtgactattgtggatcctctggggagcctcaacaacctcatgatgctgacaaggcagagaagagtctctccacattagaacacctcaagaaacaccagcagagatCCAAAGGGAAGAgaactcactgctgctctgattgtgggaagagtttcacctCCTCAGGCATTACAATTCAtcagagaatccacacaggagagaaaccttttagctgtactcaatgtgggaagagttttactcagtcaacCAGCCTGATGTCACAccagagaatccacacaggagagaaaccttttagctgtactcaatgtgggaagagttttactcagtcaaccatcctgatatcacaccagagaacacacacaggtgtAAAACCCTATAGCTGTGCTCAttgtgggaagagattcacctcCTCAAAAGTTGTTAATGTACATCAAAAAATccatacaggagagaaaccttttagctgctctgactgtggaaagagttttctACTCTCAGGACAATTaaaatcacaccagagaacacacacaggagagaaaacctgtagctgtgatgaatgtgggaagagttacactacatttaacaatctgatggtacaccagagaacacacacaggagagaaaccatattgctgtggtcaatgtgggaagagtttcactcAGCCACATaccctgatatcacaccagagaacacacacaggtgagaaaccttattgctgtggtcaatgtgggaagagttttactcagccaCATACCCTgaaatcacaccagagaacacacacaggagagaaaccttatagctgtgatcaatgtgggaagcaTTTTACTCAGTCAAGCCACTTGATagcacaccagagaacacacacaggagagaaacctcatagctgtgctcaatgtgggaagagttttactacatcttgCCAGCTAACTactcaccagagaacacacacaggaagtaatccttatagctgtactcaatgtgggaagagttttactcagtcaagccacctgatatcacaccagagaacacatacaggagagaaaccttatgaCTGTGATAAATGTgacaagagatactctgataaaagatatctgattaaacatcagaaaatacatgcaTGAAGGAGTTTTTTCATTATATCAAacattgtagaaggagtattTGTTTGTTGATTGTCTCAAGGTTGGGCAGTCAAACAGTTTTGTGTTTTGCTTTTAGCCAGTGCATCACTATTTATTTTGACTGCAAGTTTTTCCGTATTGGAGATGAGTTTTGTTTGGGCTCGTTCCAAGTGGACGCTATTGAGTTTTAGGAAAActagagttctagaagctagtgagttttaggaagatgagagttctagaagctagtgagttttaggaagatgagagttctagaagctagtggagTTTTTTTACTACATTCGTTTTAGGATTCTATAGAAAGAAAAAGGTGAGAAATAACACTattgtatattattatttagaaataaacttttttttcttgtttttaattgttgacagccagtagacacCATCTTAATATTGTAGAAAGTGAAGCATTGTAGTTGATTATAAtgtgaaatggaagttgttttctgttggtggtgagcaatcttgtccaacaaaaatataggatatatttCTTGTTGTCTTAAAGGGGGAAGGTGTTACTGGCTTTAGTTTTTcttttatgttttgaggttggactttagcacgtCTAGCTCGTAGGgcgcactgattggtgtcacctcgttagtcagtatgtgttacaccagTTCTTTTGTttgcccagtgctccagttgtcttgatagatgtggagagtcaacacctttagttgatccacctttttggtttgcttcctgtctttaagtttgtgGGTTATTATTTTGTTCTCCTATTCTTGGGCAGATTTAGAgggtctcatggtgggtgtcttttatgttccagttgttgttactagtcaactttcagAGGACACTGAGAGcaaaaattgcaagattatgttataatacttttattgcatcaaatggttgttttatgcaacagaatagagggttcttagaactattgtgtctgtgtgttctactgaggatgggcctctaggagaaaacactgacaggagatttacagTGTCTTTTGGGTGATGATATCTAAAGAGActgcattccagagcatgagatAATGTTTTTTTCTAtatggtaccagggagagatgacctcagggccagaccctggtctctacacaaagagtactgtttttacagcagatactgtctgctgtgaattataagtacctttcatacaaatcttaatcTTGTGACCCGTTCTATACATCTGTTGTTCGTCATGTAGAttgaaaggggtgtatcttggctgtAAAAGACCTTTGTACTTATGTCTCGtggctctcaacgaatcatctgggggtgattcgtcgaccagccatcattatcgtaGAGCACTCAATTGATTAACTTTTATATGTGTACGTTGTATTGCCTGCTTCCTTATtaagtgaataaagatttagtttaagaa

Function

NR:

description
zinc finger protein 850-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110487371 True 2634 mRNA 0.40 1 28074969 28077602

Neighbor

gene id symbol gene type direction distance location
LOC118938252 LOC106566134 coding upstream 10301 28061766 ~ 28064668 (+)
LOC110487397 LOC106590567 coding upstream 39888 28024977 ~ 28035081 (+)
LOC118938251 NA coding upstream 124558 27944456 ~ 27950411 (+)
LOC110485128 LOC106595049 coding upstream 131193 27915251 ~ 27943776 (+)
LOC110487376 NA coding upstream 159213 27907785 ~ 27915756 (+)
LOC110487363 LOC106594826 coding downstream 103182 28180784 ~ 28201594 (+)
LOC118938258 NA coding downstream 259078 28336680 ~ 28337325 (+)
LOC110513252 NA coding downstream 260899 28338501 ~ 28698821 (+)
LOC110487355 LOC106561190 coding downstream 394731 28472333 ~ 28500669 (+)
LOC110487378 LOC106613297 coding downstream 518363 28595965 ~ 28603570 (+)
G1159548 NA non-coding upstream 17698 28046027 ~ 28057271 (+)
G1159469 NA non-coding upstream 154979 27846124 ~ 27919990 (+)
G1158375 NA non-coding upstream 222175 27851634 ~ 27852794 (+)
G1158371 NA non-coding upstream 259984 27814382 ~ 27814985 (+)
G1158351 NA non-coding upstream 263935 27810093 ~ 27811034 (+)
G1159667 NA non-coding downstream 120633 28198235 ~ 28198615 (+)
G1159656 NA non-coding downstream 125083 28202685 ~ 28203249 (+)
G1159675 NA non-coding downstream 141144 28218746 ~ 28267690 (+)
G1159679 NA non-coding downstream 155055 28232657 ~ 28262037 (+)
G1159688 NA non-coding downstream 190191 28267793 ~ 28269950 (+)
LOC118938246 LOC106595566 other upstream 209262 27863508 ~ 27865760 (+)
G1159435 NA other upstream 288804 27780222 ~ 27786165 (+)
LOC110485129 LOC106591690 other upstream 292619 27768154 ~ 27788573 (+)
G1158342 NA other upstream 306328 27493154 ~ 27768641 (+)
LOC110485126 NA other upstream 783751 27285432 ~ 27291404 (+)
G1159631 NA other downstream 42063 28119665 ~ 28125638 (+)
G1159684 NA other downstream 174928 28252530 ~ 28257974 (+)
G1159924 NA other downstream 741132 28818734 ~ 28819448 (+)

Expression


Co-expression Network