LOC118938258


Basic Information

Item Value
gene id LOC118938258
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 28336680 ~ 28337325 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005035513.1
ttctctctccttcacttcatccctctctccccttctccctaaatcctctaggttatatcagctgtgtcggtGAACCACTCCTCCTGGCTACATAGAGGAcacagcatgatcagagatatgttttgttgtgagaggatgccaacccccagtcccatcatcgccacctcaccTCACCGCTTTTAAGATAACCTTTGGGCCGACTAGAGACACtattatgtaattgtgatgaactgagagaatatttagCTGCCTTCCCTGCTCCTATGTgtttacctctttccctttctgtcttttacacctcctcctctttcttcctctgtttttataATTCACAacagatgtgcattgaagtacagattgaacttgtattgaTAACACTTGGATAATGAGCTTTTCCATAAAcgtttcacattctctactggttgaaatgaagtgTAATGTGATGAAATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005035513.1 True 450 mRNA 0.42 2 28336680 28337325

Neighbor

gene id symbol gene type direction distance location
LOC110487363 LOC106594826 coding upstream 135086 28180784 ~ 28201594 (+)
LOC110487371 NA coding upstream 259078 28074969 ~ 28077602 (+)
LOC118938252 LOC106566134 coding upstream 272012 28061766 ~ 28064668 (+)
LOC110487397 LOC106590567 coding upstream 301599 28024977 ~ 28035081 (+)
LOC118938251 NA coding upstream 386269 27944456 ~ 27950411 (+)
LOC110513252 NA coding downstream 1176 28338501 ~ 28698821 (+)
LOC110487355 LOC106561190 coding downstream 135008 28472333 ~ 28500669 (+)
LOC110487378 LOC106613297 coding downstream 258640 28595965 ~ 28603570 (+)
LOC118938254 NA coding downstream 267264 28604589 ~ 28608693 (+)
LOC110487366 NA coding downstream 370370 28707695 ~ 28713789 (+)
G1159689 NA non-coding upstream 14478 28272713 ~ 28322202 (+)
G1159688 NA non-coding upstream 66730 28267793 ~ 28269950 (+)
G1159675 NA non-coding upstream 68990 28218746 ~ 28267690 (+)
G1159679 NA non-coding upstream 74643 28232657 ~ 28262037 (+)
G1159656 NA non-coding upstream 133431 28202685 ~ 28203249 (+)
G1159699 NA non-coding downstream 165 28337490 ~ 28337800 (+)
G1159553 NA non-coding downstream 11319 28348644 ~ 28353676 (+)
G1159716 NA non-coding downstream 74241 28411566 ~ 28432077 (+)
G1159719 NA non-coding downstream 75216 28412541 ~ 28438062 (+)
G1159718 NA non-coding downstream 101252 28438577 ~ 28446465 (+)
G1159684 NA other upstream 78706 28252530 ~ 28257974 (+)
G1159631 NA other upstream 211042 28119665 ~ 28125638 (+)
LOC118938246 LOC106595566 other upstream 470973 27863508 ~ 27865760 (+)
G1159435 NA other upstream 550515 27780222 ~ 27786165 (+)
LOC110485129 LOC106591690 other upstream 554330 27768154 ~ 27788573 (+)
G1159924 NA other downstream 481409 28818734 ~ 28819448 (+)
G1161908 NA other downstream 961433 29298758 ~ 29299656 (+)
si:ch211-126j24.1 LOC106585260 other downstream 1026727 29266618 ~ 29370947 (+)

Expression


Co-expression Network