LOC110486119 (LOC106600898)



Basic Information


Item Value
gene id LOC110486119
gene name LOC106600898
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 31409126 ~ 31442138 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_036939735.1
ATGGATCAGTTCAACCCAAGTCTACAGAAGCTAGTGTCTTTGGGAAACAGCTACATGCAGGCTTTCCAAGccctCTCTGTAACCAGTGAGGCTTACTTCAGCACCCTTGCTAAGATAGGGGAGCAGGCCTTCCACACCATGTCGTCTCGCTTGATTGGAGATGTCCTGATTCAGATTTCAGAGAACCAGAGGCGACTCACCGCTGAACTGGAAGCAATATTCCGCTGGTTCCACTCTGAGGTGCTGCAGGAGATGGACAACAATGTCAAACTGGATAAAGACTACATAGCAGGCAGCAGGAGGCGATATGAGATGGAGGTACGGACCCAGGCCACATCTTTAGAGAGGCAGCTGAGGGGAGGGGCTTACCAgGATGAGTACATTCACTTCCTGAGGGATAGTCAGCGTGAGGCTCTgatggaggaggaaaggagataCCGTTTCCTGGCTGAGAAACACTGTGGTCTCACTCAGTCCATCGTCTATCTCATGAACAAGACAGGGGCAGGGGGAGGCCTACAGCAGATAGCTGATGGATTGAGAGACCAGGTCAATGCCACCAGAGGACCTGGATCCCAGAACCCCTGTCGCCTGGACAACACGTCcagaatgagggaggaggataggTGGAGCCAATGGTCAGGCAAAGAGGAGCAGCCTCTGGGAAGAGTGCCCTCCAGAGGCCCATCACCCCAAAACACCCTTTCCCGCTCCAGCTCAGTTGGTGAGTCCCTAGGtctgggtggaggtggaggagggagacctATGAGAGCTCTGGTGTCCCACCCCGCTAACTCCAACAGCCCCACCCTGCTGCCCTTCTCCAGAGGGGAGGTGGTGAGCGTGCTGGTGCAGGATCCCCGTAACGGCTGACTCTACGGCCTGGCAGAGAACAGCTCacgTCAGGGCTGGTTTCCAGCTGCCTATGTGGGGCCACTGGAGGAGGCCCCTAAATCAACTGGCTCCAGTAGCGCCACCCTTAGGAGCGGCCACAGTATGGACAACCTGCTGGACCAATCAGGAAGCAGCAGCCACGGCAGACCCCCGCCCCCGCCTCCGCCCAATAGACAGACAGAGCTGCATCCAATCACACCCATCGTGGAGAGAAGGGCAGAGTCTCACTCTGACAACAGGGTAGTGCTGCCTGGGTGAATGATCACTGAGAGTTGAGAGCGCCATGGTGGACCTGGGCCAAACCTCTTCCCAAAGGGCACTAACCCTTTCGCCACTGTCAAGCTGAAGCCCACATCCACAGATGACCGATCTGCTCCACGGCTCCGTCGGTGAAGAGGCCACGCCCTGGAGAGGTACTGGGCGCATTCCAGGTTGACTACATTTCAGTCGTTGGATTGCATCAAAAAATTGTTTCATGCCACTTTATTGACTGTGCAGCCGACCGCTATATCATATGATTCACTGATCtgttaaataaatatttatcCAGGCGGGTATGAAATGTAGTCAGCCTGAAACGCGTCCACTACCATGCAGCAGGGGTTTTAGGATTGATGCCCTAAAACTGCCCCAAACCTTCCCAAATGGTTGAAAACTGTCTTAAAACTTCCCCAAATTTTCCCTAAGCAGCCCCTAATACCAATCTTGTACAGTAGGTTATTTATATCCATATTATGGAGTTTATCGGATGACTACAGTGATAAAGGAAGTTCAGGGGGCAATGTAAGATGCCAGAATCCCTAATATATGCTTGGTGCACTGATTGACCTGAAAGGTGCATTAATAATTTTTATTTCATTAGTGAGACAAATCTTTGAGAGCTCTCATTTATGCACTTTTCTTCAGAATCAGGGATATACATGTCAGGTACAGGAAATATCATGGTAGAAGAAGTTGTTTTTATCAAAGCTTTTTGCATTGTTGTCTTCAAGTAGCTCTTTTATTTAGCTTTGCTTGTACAGTAACAATATGGCAGTTTAAACCAATACATAACTTTGATACTAAACTACAGTGAACCACAGTGAGCTAATCTTTCTCTTCGGAATGCCATGTAGATAGATTGTTATGACAGACAGAGCTGCATCCAATCACACCCATCGTGGAGAGAAGGGCAGAGTCTCACTCTGACAACAGGGTAGTGCTGCCTGGGTGAATGATCACTGAGAGTTGAGAGCGCCATGGTGGACCTGGGCCAAACCTCTTCCCAAAGGGCACTAACCCTTTCGCCACTGTCAAGCTGAAGCCCACATCCACAGATGACCGATCTGCTCCACGGCTCCGTCGGTGAAGAGGCCACGCCCTGGAGAGGTACTGGGCGCATTCCAGGTTGACTACATTTCAGTCGTTGGATTGCATCAAAAAATTGTTTCATGCCACTTTATTGACTGTGCAGCCGACCGCTATATCATATGATTCACTGATCtgttaaataaatatttatcCAGGCGGGTATGAAATGTAGTCAGCCTGAAACGCGTCCACTACCATGCAGCAGGGGTTTTAGGATTGATGCCCTAAAACTGCCCCAAACCTTCCCAAATGGTTGAAAACTGTCTTAAAACTTCCCCAAATTTTCCCTAAGCAGCCCCTAATACCAATCTTGTACAGTAGGTTATTTATATCCATATTATGGAGTTTATCGGATGACTACAGTGATAAAGGAAGTTCAGGGGGCAATGTAAGATGCCAGAATCCCTAATATATGCTTGGTGCACTGATTGACCTGAAAGGTGCATTAATAATTTTTATTTCATTAGTGAGACAAATCTTTGAGAGCTCTCATTTATGCACTTTTCTTCAGAATCAGGGATATACATGTCAGGTACAGGAAATATCATGGTAGAAGAAGTTGTTTTTATCAAAGCTTTTTGCATTGTTGTCTTCAAGTAGCTCTTTTATTTAGCTTTGCTTGTACAGTAACAATATGGCAGTTTAAACCAATACATAACTTTGATACTAAACTACAGTGAACCACAGTGAGCTAATCTTTCTCTTCGGAATGCCATGTAGATAGATTGTTATGACAAGTGAGTTTGAGCTACTAACTTAACAGTGCTATTTTGTCCAGTGCCTTTAGTAAATGTACTATACgatttgtatgtgtttgtttgttcatGCAGGCAGTAGGGTGGCCTACTACTCTAGTGAAGAACCCGGGGTTGTCAATTCTAATCCACTAATGGGATACTTAACCTAAATTACCCTtagtgtgtacccagtatgtaAATGGCTGACGTGAGAGTGTTGAGCTAATGTTATAGCTGTAACTAAACAAATTATTTTTACTTTACTGCTAGAATAAAAATGGCAGCTGCTTTTCACATGGTTTCAAATTCCTTTAATCAGACAGAAATACATCCCCTGATTCTTACGTTTTTTTAGTTGCTGGCGATAttttacacatttattttctAGTTATTGAGGGCCACTcggtagtgctgagcgattaa

Function


NR:

description
PREDICTED: brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 2 isoform X3

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_036939735.1 True 3404 mRNA 0.47 14 31409126 31442138

Neighbor


gene id symbol gene type direction distance location
LOC110486114 NA coding upstream 138695 31267822 ~ 31270431 (+)
LOC110486110 LOC106607429 coding upstream 159044 31243865 ~ 31250082 (+)
LOC110486108 LOC106607428 coding upstream 165999 31240900 ~ 31243127 (+)
LOC110486104 chchd5 coding upstream 289445 31113781 ~ 31119681 (+)
LOC110485141 LOC106600922 coding upstream 446807 30904798 ~ 30962319 (+)
LOC110486123 LOC106607440 coding downstream 47679 31489817 ~ 31513332 (+)
LOC110486128 LOC106607447 coding downstream 200244 31642382 ~ 31649841 (+)
LOC110486130 LOC106607449 coding downstream 224102 31666240 ~ 31673890 (+)
LOC110486131 LOC105029658 coding downstream 242336 31684474 ~ 31690205 (+)
LOC110487528 tex33 coding downstream 249395 31691533 ~ 31692268 (+)
G1164076 NA non-coding upstream 51828 31355195 ~ 31357298 (+)
G1164069 NA non-coding upstream 70716 31328752 ~ 31338410 (+)
G1164055 NA non-coding upstream 73471 31331057 ~ 31335655 (+)
G1163989 NA non-coding upstream 154338 31189977 ~ 31254788 (+)
G1163962 NA non-coding upstream 260460 31148280 ~ 31148666 (+)
G1164096 NA non-coding downstream 1136 31443274 ~ 31444634 (+)
G1164121 NA non-coding downstream 3359 31445497 ~ 31482024 (+)
G1164530 NA non-coding downstream 81461 31523599 ~ 31524049 (+)
G1164537 NA non-coding downstream 84141 31526279 ~ 31526494 (+)
G1162753 NA other upstream 1577830 29830754 ~ 29831296 (+)
G1162364 NA other upstream 1914224 29494362 ~ 29494902 (+)
si:ch211-126j24.1 LOC106585260 other upstream 2038179 29266618 ~ 29370947 (+)
G1161908 NA other upstream 2109470 29298758 ~ 29299656 (+)
LOC110486134 LOC106600876 other downstream 559613 32001741 ~ 32159164 (+)
ifn2 ifn2 other downstream 1273118 32714937 ~ 32722676 (+)
LOC110486146 LOC106607468 other downstream 1786975 33001356 ~ 33230495 (+)
G1166318 NA other downstream 1797815 33239953 ~ 33249208 (+)
G1166779 NA other downstream 2348502 33790640 ~ 33803665 (+)

Expression



Co-expression Network