Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118938569 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 32482538 ~ 32482591 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005035777.1 | True | 54 | mRNA | 0.39 | 1 | 32482538 | 32482591 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486139 | LOC106607458 | coding | upstream | 111890 | 32290341 ~ 32370648 (+) |
| LOC110486136 | cdc27 | coding | upstream | 193214 | 32268216 ~ 32289324 (+) |
| LOC110486134 | LOC106600876 | coding | upstream | 323374 | 32001741 ~ 32159164 (+) |
| il2rb2 | il2rb2 | coding | upstream | 772798 | 31701964 ~ 31709740 (+) |
| LOC110487528 | tex33 | coding | upstream | 790270 | 31691533 ~ 31692268 (+) |
| gh2 | gh2 | coding | downstream | 42646 | 32525237 ~ 32528851 (+) |
| LOC110487530 | LOC106595256 | coding | downstream | 69656 | 32552247 ~ 32566783 (+) |
| ifn2 | ifn2 | coding | downstream | 232346 | 32714937 ~ 32722676 (+) |
| LOC118938068 | NA | coding | downstream | 337455 | 32820046 ~ 32824535 (+) |
| LOC110485150 | LOC105907864 | coding | downstream | 342631 | 32825222 ~ 32826023 (+) |
| G1165418 | NA | non-coding | upstream | 218679 | 32263263 ~ 32263859 (+) |
| G1165411 | NA | non-coding | upstream | 231018 | 32251306 ~ 32251520 (+) |
| G1165356 | NA | non-coding | upstream | 245688 | 32185478 ~ 32236850 (+) |
| G1165355 | NA | non-coding | upstream | 297570 | 32182733 ~ 32184968 (+) |
| G1165475 | NA | non-coding | downstream | 24301 | 32506892 ~ 32508136 (+) |
| G1165740 | NA | non-coding | downstream | 59452 | 32542043 ~ 32542339 (+) |
| G1165755 | NA | non-coding | downstream | 67506 | 32550097 ~ 32550457 (+) |
| G1165768 | NA | non-coding | downstream | 92260 | 32574851 ~ 32590340 (+) |
| G1165814 | NA | non-coding | downstream | 175021 | 32657612 ~ 32672802 (+) |
| LOC110486104 | chchd5 | other | upstream | 1362861 | 31113781 ~ 31119681 (+) |
| G1162753 | NA | other | upstream | 2651242 | 29830754 ~ 29831296 (+) |
| G1162364 | NA | other | upstream | 2987636 | 29494362 ~ 29494902 (+) |
| si:ch211-126j24.1 | LOC106585260 | other | upstream | 3111591 | 29266618 ~ 29370947 (+) |
| LOC110486146 | LOC106607468 | other | downstream | 746522 | 33001356 ~ 33230495 (+) |
| G1166318 | NA | other | downstream | 757362 | 33239953 ~ 33249208 (+) |
| G1166779 | NA | other | downstream | 1308049 | 33790640 ~ 33803665 (+) |
| LOC110486188 | LOC107665142 | other | downstream | 2198597 | 34680909 ~ 34687670 (+) |
