Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110486193 |
| gene name | LOC106607504 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 34720795 ~ 34735641 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021557614.2 | False | 6808 | mRNA | 0.42 | 4 | 34722212 | 34735641 |
| TU1332372 | False | 3073 | TUCP | 0.39 | 2 | 34720795 | 34724324 |
| TU1332370 | True | 4509 | lncRNA | 0.38 | 2 | 34721003 | 34725968 |
34,714,000
34,716,000
34,718,000
34,720,000
34,722,000
34,724,000
34,726,000
34,728,000
34,730,000
34,732,000
34,734,000
34,736,000
34,738,000
34,740,000
34,742,000
34,744,000
34,746,000
34,748,000
NC_048577.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486190 | LOC106600811 | coding | downstream | 6430 | 34712159 ~ 34715782 (-) |
| LOC110486186 | eif1b | coding | downstream | 77353 | 34642407 ~ 34644859 (-) |
| LOC110486185 | LOC106600820 | coding | downstream | 125320 | 34515343 ~ 34596892 (-) |
| LOC110486184 | LOC106607500 | coding | downstream | 211378 | 34502501 ~ 34510834 (-) |
| LOC110486180 | LOC106607496 | coding | downstream | 321852 | 34392288 ~ 34400360 (-) |
| si:dkey-89b17.4 | LOC106607502 | coding | upstream | 121914 | 34855625 ~ 34879901 (-) |
| ndkb | ndkb | coding | upstream | 172295 | 34907936 ~ 34910785 (-) |
| LOC110486196 | ubc12 | coding | upstream | 220075 | 34955716 ~ 34966896 (-) |
| LOC110486202 | LOC106600799 | coding | upstream | 341164 | 35076805 ~ 35107630 (-) |
| LOC110486203 | LOC106607515 | coding | upstream | 387791 | 35123432 ~ 35148336 (-) |
| G1168406 | NA | non-coding | downstream | 28086 | 34693881 ~ 34694126 (-) |
| G1168407 | NA | non-coding | downstream | 28546 | 34693315 ~ 34693666 (-) |
| G1168312 | NA | non-coding | downstream | 209010 | 34512956 ~ 34513202 (-) |
| G1168466 | stx1b | non-coding | upstream | 47008 | 34782649 ~ 34822399 (-) |
| G1168509 | NA | non-coding | upstream | 119066 | 34854707 ~ 34854974 (-) |
| G1168556 | NA | non-coding | upstream | 207661 | 34943302 ~ 34943510 (-) |
| G1168254 | NA | other | downstream | 298351 | 34422773 ~ 34423861 (-) |
| G1168253 | NA | other | downstream | 299871 | 34421339 ~ 34422341 (-) |
| G1168166 | NA | other | downstream | 411204 | 34304529 ~ 34311083 (-) |
| G1168448 | NA | other | upstream | 107639 | 34843280 ~ 34851661 (-) |
| G1168559 | NA | other | upstream | 213596 | 34949237 ~ 34950309 (-) |
| G1168539 | LOC106600802 | other | upstream | 266872 | 35002513 ~ 35008297 (-) |
| G1168629 | NA | other | upstream | 361811 | 35097452 ~ 35111011 (-) |
