Item | Value |
---|---|
gene id | si:dkey-89b17.4 |
gene name | LOC106607502 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048577.1 |
NCBI id | CM023231.2 |
chromosome length | 73332040 |
location | 34855625 ~ 34879901 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
PREDICTED: zinc finger protein 646 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021557611.2 | False | 7077 | mRNA | 0.52 | 6 | 34857555 | 34879901 |
XM_021557610.2 | False | 7150 | mRNA | 0.52 | 7 | 34857556 | 34879900 |
XM_021557612.2 | False | 7753 | mRNA | 0.48 | 6 | 34860699 | 34879897 |
XR_002468046.2 | False | 8550 | mRNA | 0.48 | 6 | 34860699 | 34879897 |
TU1332430 | False | 2668 | TUCP | 0.38 | 1 | 34855625 | 34858292 |
TU1332428 | False | 3270 | TUCP | 0.44 | 1 | 34862127 | 34865396 |
TU1332429 | True | 683 | lncRNA | 0.40 | 3 | 34877206 | 34879798 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110486193 | LOC106607504 | coding | downstream | 121914 | 34720795 ~ 34735641 (-) |
LOC110486190 | LOC106600811 | coding | downstream | 141773 | 34712159 ~ 34715782 (-) |
LOC110486186 | eif1b | coding | downstream | 212696 | 34642407 ~ 34644859 (-) |
LOC110486185 | LOC106600820 | coding | downstream | 260663 | 34515343 ~ 34596892 (-) |
LOC110486184 | LOC106607500 | coding | downstream | 346721 | 34502501 ~ 34510834 (-) |
ndkb | ndkb | coding | upstream | 28035 | 34907936 ~ 34910785 (-) |
LOC110486196 | ubc12 | coding | upstream | 75815 | 34955716 ~ 34966896 (-) |
LOC110486202 | LOC106600799 | coding | upstream | 196904 | 35076805 ~ 35107630 (-) |
LOC110486203 | LOC106607515 | coding | upstream | 243531 | 35123432 ~ 35148336 (-) |
LOC110486204 | LOC106607517 | coding | upstream | 290305 | 35170206 ~ 35182762 (-) |
G1168509 | NA | non-coding | downstream | 2581 | 34854707 ~ 34854974 (-) |
G1168466 | stx1b | non-coding | downstream | 35156 | 34782649 ~ 34822399 (-) |
G1168406 | NA | non-coding | downstream | 163429 | 34693881 ~ 34694126 (-) |
G1168407 | NA | non-coding | downstream | 163889 | 34693315 ~ 34693666 (-) |
G1168556 | NA | non-coding | upstream | 63401 | 34943302 ~ 34943510 (-) |
G1168568 | NA | non-coding | upstream | 93499 | 34973400 ~ 34973644 (-) |
G1168549 | NA | non-coding | upstream | 115053 | 34994954 ~ 34998397 (-) |
G1168577 | NA | non-coding | upstream | 118786 | 34998687 ~ 34998895 (-) |
G1168448 | NA | other | downstream | 5894 | 34843280 ~ 34851661 (-) |
G1168254 | NA | other | downstream | 433694 | 34422773 ~ 34423861 (-) |
G1168559 | NA | other | upstream | 69336 | 34949237 ~ 34950309 (-) |
G1168539 | LOC106600802 | other | upstream | 122612 | 35002513 ~ 35008297 (-) |
G1168629 | NA | other | upstream | 217551 | 35097452 ~ 35111011 (-) |
G1170691 | rl19 | other | upstream | 982251 | 35862152 ~ 35864644 (-) |
si:dkey-89b17.4 | LOC106607502 | other | downstream | 11810 | 34855625 ~ 34879901 (-) |