Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110486195 |
| gene name | utp18 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 34919331 ~ 34932630 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| utp18 | Predicted to be part of Pwp2p-containing subcomplex of 90S preribosome and small-subunit processome. Orthologous to human UTP18 (UTP18 small subunit processome component). |
| description |
|---|
| U3 small nucleolar RNA-associated protein 18 homolog |
| id | description |
|---|---|
| K14553 | UTP18; U3 small nucleolar RNA-associated protein 18 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021557618.2 | True | 3924 | mRNA | 0.44 | 13 | 34919331 | 34932630 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486194 | LOC106607505 | coding | upstream | 13283 | 34894771 ~ 34906048 (+) |
| LOC100136181 | LOC100136181 | coding | upstream | 75064 | 34782778 ~ 34844267 (+) |
| LOC110485154 | LOC106600810 | coding | upstream | 144080 | 34771005 ~ 34775251 (+) |
| LOC110486188 | LOC107665142 | coding | upstream | 231661 | 34680909 ~ 34687670 (+) |
| LOC110486187 | LOC106600778 | coding | upstream | 241197 | 34643750 ~ 34678134 (+) |
| LOC110485155 | LOC106600806 | coding | downstream | 4935 | 34937565 ~ 34947362 (+) |
| LOC110486197 | LOC106607508 | coding | downstream | 42485 | 34975115 ~ 34998416 (+) |
| LOC110486198 | LOC106607509 | coding | downstream | 69875 | 35002505 ~ 35023019 (+) |
| LOC118938633 | NA | coding | downstream | 85446 | 35018076 ~ 35018219 (+) |
| LOC118938634 | NA | coding | downstream | 86315 | 35018945 ~ 35019088 (+) |
| G1167936 | NA | non-coding | upstream | 44716 | 34874384 ~ 34874615 (+) |
| G1167934 | NA | non-coding | upstream | 47146 | 34871822 ~ 34872185 (+) |
| G1167741 | NA | non-coding | upstream | 55838 | 34862144 ~ 34863493 (+) |
| G1167933 | NA | non-coding | upstream | 64400 | 34854695 ~ 34854931 (+) |
| G1167931 | NA | non-coding | upstream | 66357 | 34852770 ~ 34852974 (+) |
| G1167958 | NA | non-coding | downstream | 608 | 34933238 ~ 34933462 (+) |
| G1167960 | LOC106584099 | non-coding | downstream | 2042 | 34934672 ~ 34934886 (+) |
| G1167961 | NA | non-coding | downstream | 3040 | 34935670 ~ 34935918 (+) |
| G1167969 | NA | non-coding | downstream | 17711 | 34950341 ~ 34951244 (+) |
| G1167972 | NA | non-coding | downstream | 39669 | 34972299 ~ 34972534 (+) |
| G1166779 | NA | other | upstream | 1115666 | 33790640 ~ 33803665 (+) |
| G1166318 | NA | other | upstream | 1670123 | 33239953 ~ 33249208 (+) |
| LOC110486146 | LOC106607468 | other | upstream | 1688848 | 33001356 ~ 33230495 (+) |
| ifn2 | ifn2 | other | upstream | 2196869 | 32714937 ~ 32722676 (+) |
| G1169121 | LOC106607257 | other | downstream | 1057226 | 35989856 ~ 35992600 (+) |
| G1169207 | NA | other | downstream | 1234998 | 36167628 ~ 36168331 (+) |
| G1169208 | NA | other | downstream | 1237266 | 36169896 ~ 36171571 (+) |
| LOC110486232 | rprml | other | downstream | 1405463 | 36338066 ~ 36339755 (+) |
| LOC110486241 | LOC106607273 | other | downstream | 1618391 | 36551021 ~ 36582092 (+) |
