Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118938634 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 35018945 ~ 35019088 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005035841.1 | True | 144 | mRNA | 0.56 | 1 | 35018945 | 35019088 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938633 | NA | coding | upstream | 726 | 35018076 ~ 35018219 (+) |
| LOC110486197 | LOC106607508 | coding | upstream | 20529 | 34975115 ~ 34998416 (+) |
| LOC110485155 | LOC106600806 | coding | upstream | 71583 | 34937565 ~ 34947362 (+) |
| LOC110486195 | utp18 | coding | upstream | 86315 | 34919331 ~ 34932630 (+) |
| LOC110486194 | LOC106607505 | coding | upstream | 112897 | 34894771 ~ 34906048 (+) |
| LOC118938632 | NA | coding | downstream | 461 | 35019549 ~ 35019692 (+) |
| LOC100499595 | socs7 | coding | downstream | 6025 | 35025113 ~ 35039469 (+) |
| LOC110486200 | LOC106607513 | coding | downstream | 21447 | 35040535 ~ 35073933 (+) |
| LOC110486205 | LOC106607518 | coding | downstream | 178173 | 35197261 ~ 35237434 (+) |
| LOC110486207 | LOC106600795 | coding | downstream | 468837 | 35487925 ~ 35497727 (+) |
| G1167984 | NA | non-coding | upstream | 18999 | 34999736 ~ 34999946 (+) |
| G1167972 | NA | non-coding | upstream | 46411 | 34972299 ~ 34972534 (+) |
| G1167969 | NA | non-coding | upstream | 67701 | 34950341 ~ 34951244 (+) |
| G1167961 | NA | non-coding | upstream | 83027 | 34935670 ~ 34935918 (+) |
| G1167960 | LOC106584099 | non-coding | upstream | 84059 | 34934672 ~ 34934886 (+) |
| G1168035 | NA | non-coding | downstream | 104338 | 35123426 ~ 35124568 (+) |
| G1168013 | NA | non-coding | downstream | 105537 | 35124625 ~ 35125327 (+) |
| G1168133 | NA | non-coding | downstream | 264937 | 35284025 ~ 35292246 (+) |
| G1168134 | NA | non-coding | downstream | 265683 | 35284771 ~ 35293174 (+) |
| G1168755 | NA | non-coding | downstream | 282504 | 35301592 ~ 35301815 (+) |
| LOC110486188 | LOC107665142 | other | upstream | 331295 | 34680909 ~ 34687670 (+) |
| G1166779 | NA | other | upstream | 1215280 | 33790640 ~ 33803665 (+) |
| G1166318 | NA | other | upstream | 1769737 | 33239953 ~ 33249208 (+) |
| LOC110486146 | LOC106607468 | other | upstream | 1788462 | 33001356 ~ 33230495 (+) |
| ifn2 | ifn2 | other | upstream | 2296483 | 32714937 ~ 32722676 (+) |
| G1169121 | LOC106607257 | other | downstream | 970768 | 35989856 ~ 35992600 (+) |
| G1169207 | NA | other | downstream | 1148540 | 36167628 ~ 36168331 (+) |
| G1169208 | NA | other | downstream | 1150808 | 36169896 ~ 36171571 (+) |
| LOC110486232 | rprml | other | downstream | 1319005 | 36338066 ~ 36339755 (+) |
| LOC110486241 | LOC106607273 | other | downstream | 1531933 | 36551021 ~ 36582092 (+) |
