Item | Value |
---|---|
gene id | LOC110486203 |
gene name | LOC106607515 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048577.1 |
NCBI id | CM023231.2 |
chromosome length | 73332040 |
location | 35123432 ~ 35148336 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
PREDICTED: mucin-2-like isoform X1 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036940860.1 | False | 6122 | mRNA | 0.46 | 13 | 35123432 | 35148336 |
XM_036940861.1 | False | 6104 | mRNA | 0.46 | 13 | 35123432 | 35148336 |
XM_036940862.1 | False | 6092 | mRNA | 0.46 | 14 | 35123432 | 35148336 |
XM_036940863.1 | False | 6092 | mRNA | 0.46 | 14 | 35123432 | 35148336 |
XM_036940864.1 | False | 6089 | mRNA | 0.46 | 12 | 35123432 | 35148336 |
XM_036940865.1 | False | 6086 | mRNA | 0.46 | 14 | 35123432 | 35148336 |
XM_036940866.1 | False | 6077 | mRNA | 0.46 | 14 | 35123432 | 35148336 |
XM_036940867.1 | False | 6077 | mRNA | 0.46 | 14 | 35123432 | 35148336 |
XM_036940868.1 | False | 6077 | mRNA | 0.46 | 14 | 35123432 | 35148336 |
XM_036940869.1 | False | 6077 | mRNA | 0.46 | 14 | 35123432 | 35148336 |
XM_036940870.1 | False | 6077 | mRNA | 0.46 | 14 | 35123432 | 35148336 |
XM_036940871.1 | False | 6062 | mRNA | 0.46 | 14 | 35123432 | 35148336 |
XM_036940872.1 | False | 6062 | mRNA | 0.46 | 14 | 35123432 | 35148336 |
XM_036940873.1 | False | 6032 | mRNA | 0.46 | 14 | 35123432 | 35148336 |
XM_036940874.1 | False | 6032 | mRNA | 0.46 | 14 | 35123432 | 35148336 |
XM_036940875.1 | False | 6026 | mRNA | 0.46 | 14 | 35123432 | 35148336 |
XM_036940876.1 | False | 6017 | mRNA | 0.46 | 14 | 35123432 | 35148336 |
XM_036940877.1 | False | 5987 | mRNA | 0.46 | 14 | 35123432 | 35148336 |
XM_036940878.1 | False | 5987 | mRNA | 0.46 | 14 | 35123432 | 35148336 |
XM_036940879.1 | False | 5981 | mRNA | 0.46 | 14 | 35123432 | 35148336 |
XM_036940880.1 | False | 5942 | mRNA | 0.46 | 14 | 35123432 | 35148336 |
XM_036940881.1 | False | 5906 | mRNA | 0.46 | 15 | 35123432 | 35148336 |
XM_036940882.1 | False | 5891 | mRNA | 0.46 | 14 | 35123432 | 35148336 |
XM_036940883.1 | False | 5882 | mRNA | 0.46 | 14 | 35123432 | 35148336 |
XM_036940884.1 | False | 5807 | mRNA | 0.46 | 14 | 35123432 | 35148336 |
XM_036940885.1 | False | 5771 | mRNA | 0.46 | 14 | 35123432 | 35148336 |
XM_036940886.1 | False | 5756 | mRNA | 0.46 | 14 | 35123432 | 35148336 |
XM_036940888.1 | False | 5747 | mRNA | 0.46 | 14 | 35123432 | 35148336 |
XM_036940889.1 | False | 5717 | mRNA | 0.46 | 14 | 35123432 | 35148336 |
XM_036940890.1 | False | 5702 | mRNA | 0.46 | 14 | 35123432 | 35148336 |
XM_036940891.1 | False | 5702 | mRNA | 0.46 | 14 | 35123432 | 35148336 |
XM_036940892.1 | False | 5672 | mRNA | 0.46 | 14 | 35123432 | 35148336 |
XM_036940893.1 | False | 5657 | mRNA | 0.46 | 14 | 35123432 | 35148336 |
XM_036940894.1 | False | 5591 | mRNA | 0.46 | 14 | 35123432 | 35148336 |
XM_036940895.1 | True | 5171 | mRNA | 0.47 | 14 | 35123432 | 35148336 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110486202 | LOC106600799 | coding | downstream | 15802 | 35076805 ~ 35107630 (-) |
LOC110486196 | ubc12 | coding | downstream | 156536 | 34955716 ~ 34966896 (-) |
ndkb | ndkb | coding | downstream | 212647 | 34907936 ~ 34910785 (-) |
si:dkey-89b17.4 | LOC106607502 | coding | downstream | 243531 | 34855625 ~ 34879901 (-) |
LOC110486193 | LOC106607504 | coding | downstream | 387791 | 34720795 ~ 34735641 (-) |
LOC110486204 | LOC106607517 | coding | upstream | 21870 | 35170206 ~ 35182762 (-) |
trnac-gca-7 | NA | coding | upstream | 334648 | 35482984 ~ 35483055 (-) |
LOC110486206 | LOC106607239 | coding | upstream | 349213 | 35497549 ~ 35532036 (-) |
LOC110485156 | LOC105007255 | coding | upstream | 386100 | 35534436 ~ 35536497 (-) |
LOC110486209 | LOC100196171 | coding | upstream | 388938 | 35537274 ~ 35547651 (-) |
G1168592 | NA | non-coding | downstream | 83977 | 35038690 ~ 35039455 (-) |
G1168542 | NA | non-coding | downstream | 104394 | 35017918 ~ 35019038 (-) |
G1168577 | NA | non-coding | downstream | 124537 | 34998687 ~ 34998895 (-) |
G1168549 | NA | non-coding | downstream | 125035 | 34994954 ~ 34998397 (-) |
G1168568 | NA | non-coding | downstream | 149788 | 34973400 ~ 34973644 (-) |
G1168758 | NA | non-coding | upstream | 154955 | 35303291 ~ 35303527 (-) |
G1168760 | NA | non-coding | upstream | 159578 | 35307914 ~ 35308135 (-) |
G1168801 | NA | non-coding | upstream | 194201 | 35342537 ~ 35342759 (-) |
G1168828 | NA | non-coding | upstream | 207181 | 35355517 ~ 35369938 (-) |
G1168830 | NA | non-coding | upstream | 211316 | 35359652 ~ 35368640 (-) |
G1168629 | NA | other | downstream | 12421 | 35097452 ~ 35111011 (-) |
G1168539 | LOC106600802 | other | downstream | 115135 | 35002513 ~ 35008297 (-) |
G1168559 | NA | other | downstream | 173123 | 34949237 ~ 34950309 (-) |
G1168448 | NA | other | downstream | 271771 | 34843280 ~ 34851661 (-) |
G1170691 | rl19 | other | upstream | 713816 | 35862152 ~ 35864644 (-) |
LOC110485158 | LOC106607258 | other | upstream | 850587 | 35995257 ~ 36000992 (-) |
G1170811 | NA | other | upstream | 942426 | 36090762 ~ 36091417 (-) |
G1170826 | NA | other | upstream | 961766 | 36110102 ~ 36110439 (-) |