LOC118938605


Basic Information

Item Value
gene id LOC118938605
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 35862905 ~ 35862984 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005035813.1
TTAATATGATGATTCTGAGAATGGTTTCGCAAACGATGCTGAACTGTGTGATGTCACGTTTCTCTTGGCTATCTGATTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005035813.1 True 80 mRNA 0.38 1 35862905 35862984

Neighbor

gene id symbol gene type direction distance location
trnac-gca-9 NA coding upstream 50680 35812154 ~ 35812225 (+)
trnac-gca-8 NA coding upstream 55667 35807167 ~ 35807238 (+)
LOC110486213 hexim coding upstream 239584 35621377 ~ 35623321 (+)
LOC110486207 LOC106600795 coding upstream 365178 35487925 ~ 35497727 (+)
LOC110486205 LOC106607518 coding upstream 625471 35197261 ~ 35237434 (+)
LOC118938606 NA coding downstream 939 35863923 ~ 35864004 (+)
st8sia6 LOC106607255 coding downstream 37848 35900832 ~ 35909243 (+)
LOC110486225 LOC106607261 coding downstream 178787 36041771 ~ 36052964 (+)
LOC110486228 LOC106607263 coding downstream 268584 36131568 ~ 36167388 (+)
LOC110486232 rprml coding downstream 475082 36338066 ~ 36339755 (+)
G1169045 NA non-coding upstream 2183 35860410 ~ 35860722 (+)
G1169025 NA non-coding upstream 42345 35820352 ~ 35820560 (+)
G1169018 NA non-coding upstream 56957 35805442 ~ 35805948 (+)
G1168987 NA non-coding upstream 64455 35753817 ~ 35798450 (+)
G1168974 NA non-coding upstream 113495 35726325 ~ 35749410 (+)
G1169047 NA non-coding downstream 4626 35867610 ~ 35867817 (+)
G1169048 NA non-coding downstream 5263 35868247 ~ 35868500 (+)
G1169050 NA non-coding downstream 6423 35869407 ~ 35869742 (+)
G1169062 NA non-coding downstream 10325 35873309 ~ 35873530 (+)
G1169070 NA non-coding downstream 20145 35883129 ~ 35883383 (+)
LOC110486188 LOC107665142 other upstream 1175255 34680909 ~ 34687670 (+)
G1166779 NA other upstream 2059240 33790640 ~ 33803665 (+)
G1166318 NA other upstream 2613697 33239953 ~ 33249208 (+)
LOC110486146 LOC106607468 other upstream 2632422 33001356 ~ 33230495 (+)
ifn2 ifn2 other upstream 3140443 32714937 ~ 32722676 (+)
G1169121 LOC106607257 other downstream 126872 35989856 ~ 35992600 (+)
G1169207 NA other downstream 304644 36167628 ~ 36168331 (+)
G1169208 NA other downstream 306912 36169896 ~ 36171571 (+)
LOC110486241 LOC106607273 other downstream 688037 36551021 ~ 36582092 (+)

Expression


Co-expression Network