LOC118938606


Basic Information

Item Value
gene id LOC118938606
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 35863923 ~ 35864004 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005035814.1
AAAAAATGATGATTCCCTGAGAATGGTTTCGCAAACTTTGCTGAAATTTGTGATGTCATGTTTCTCTTGGCTATCTGATTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005035814.1 True 82 mRNA 0.34 1 35863923 35864004

Neighbor

gene id symbol gene type direction distance location
LOC118938605 NA coding upstream 939 35862905 ~ 35862984 (+)
trnac-gca-9 NA coding upstream 51698 35812154 ~ 35812225 (+)
trnac-gca-8 NA coding upstream 56685 35807167 ~ 35807238 (+)
LOC110486213 hexim coding upstream 240602 35621377 ~ 35623321 (+)
LOC110486207 LOC106600795 coding upstream 366196 35487925 ~ 35497727 (+)
st8sia6 LOC106607255 coding downstream 36828 35900832 ~ 35909243 (+)
LOC110486225 LOC106607261 coding downstream 177767 36041771 ~ 36052964 (+)
LOC110486228 LOC106607263 coding downstream 267564 36131568 ~ 36167388 (+)
LOC110486232 rprml coding downstream 474062 36338066 ~ 36339755 (+)
LOC110486233 LOC106607267 coding downstream 499551 36363555 ~ 36368288 (+)
G1169045 NA non-coding upstream 3201 35860410 ~ 35860722 (+)
G1169025 NA non-coding upstream 43363 35820352 ~ 35820560 (+)
G1169018 NA non-coding upstream 57975 35805442 ~ 35805948 (+)
G1168987 NA non-coding upstream 65473 35753817 ~ 35798450 (+)
G1168974 NA non-coding upstream 114513 35726325 ~ 35749410 (+)
G1169047 NA non-coding downstream 3606 35867610 ~ 35867817 (+)
G1169048 NA non-coding downstream 4243 35868247 ~ 35868500 (+)
G1169050 NA non-coding downstream 5403 35869407 ~ 35869742 (+)
G1169062 NA non-coding downstream 9305 35873309 ~ 35873530 (+)
G1169070 NA non-coding downstream 19125 35883129 ~ 35883383 (+)
LOC110486188 LOC107665142 other upstream 1176273 34680909 ~ 34687670 (+)
G1166779 NA other upstream 2060258 33790640 ~ 33803665 (+)
G1166318 NA other upstream 2614715 33239953 ~ 33249208 (+)
LOC110486146 LOC106607468 other upstream 2633440 33001356 ~ 33230495 (+)
ifn2 ifn2 other upstream 3141461 32714937 ~ 32722676 (+)
G1169121 LOC106607257 other downstream 125852 35989856 ~ 35992600 (+)
G1169207 NA other downstream 303624 36167628 ~ 36168331 (+)
G1169208 NA other downstream 305892 36169896 ~ 36171571 (+)
LOC110486241 LOC106607273 other downstream 687017 36551021 ~ 36582092 (+)

Expression


Co-expression Network