Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110485158 |
| gene name | LOC106607258 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 35995257 ~ 36000992 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| probable phosphatase phospho1, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021556224.2 | False | 4625 | mRNA | 0.45 | 3 | 35995257 | 36000976 |
| XM_036940929.1 | False | 4407 | mRNA | 0.45 | 3 | 35995257 | 36000976 |
| XM_036940930.1 | False | 4484 | mRNA | 0.45 | 3 | 35995257 | 36000976 |
| XM_036940927.1 | False | 4564 | mRNA | 0.45 | 3 | 35995257 | 36000992 |
| XR_005035527.1 | False | 4516 | mRNA | 0.45 | 4 | 35995257 | 36000992 |
| TU1335139 | True | 854 | TUCP | 0.56 | 3 | 35998923 | 36000948 |
35,994,000
35,995,000
35,996,000
35,997,000
35,998,000
35,999,000
36,000,000
36,001,000
36,001,000
36,002,000
36,003,000
36,004,000
36,005,000
36,006,000
36,007,000
36,008,000
36,009,000
NC_048577.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| eftud2 | LOC106607257 | coding | downstream | 2597 | 35978405 ~ 35992660 (-) |
| LOC110486220 | LOC106607256 | coding | downstream | 21144 | 35918932 ~ 35974113 (-) |
| cacnb1 | LOC106607253 | coding | downstream | 138621 | 35826742 ~ 35856636 (-) |
| LOC118938069 | LOC106607229 | coding | downstream | 170153 | 35822736 ~ 35825104 (-) |
| LOC110486217 | LOC106600984 | coding | downstream | 175960 | 35814277 ~ 35819297 (-) |
| LOC110486223 | LOC106607259 | coding | upstream | 6046 | 36007038 ~ 36034651 (-) |
| LOC110486224 | phb | coding | upstream | 34622 | 36035614 ~ 36039257 (-) |
| LOC110486226 | LOC106607262 | coding | upstream | 49045 | 36047634 ~ 36089985 (-) |
| LOC110485159 | LOC106607264 | coding | upstream | 236919 | 36237911 ~ 36281974 (-) |
| LOC110486229 | LOC106607265 | coding | upstream | 285058 | 36286050 ~ 36296738 (-) |
| G1170751 | NA | non-coding | downstream | 35324 | 35959709 ~ 35959933 (-) |
| G1170750 | NA | non-coding | downstream | 36184 | 35958777 ~ 35959073 (-) |
| G1170727 | NA | non-coding | downstream | 69681 | 35925342 ~ 35925576 (-) |
| G1170725 | NA | non-coding | downstream | 81066 | 35913894 ~ 35914191 (-) |
| G1170779 | NA | non-coding | upstream | 17993 | 36018985 ~ 36019277 (-) |
| G1170782 | NA | non-coding | upstream | 21157 | 36022149 ~ 36022402 (-) |
| G1170791 | NA | non-coding | upstream | 41496 | 36042488 ~ 36042770 (-) |
| G1170772 | NA | non-coding | upstream | 45980 | 36046972 ~ 36047340 (-) |
| G1170691 | rl19 | other | downstream | 130613 | 35862152 ~ 35864644 (-) |
| LOC110486204 | LOC106607517 | other | downstream | 812610 | 35170206 ~ 35182762 (-) |
| G1168629 | NA | other | downstream | 884246 | 35097452 ~ 35111011 (-) |
| G1168539 | LOC106600802 | other | downstream | 986960 | 35002513 ~ 35008297 (-) |
| G1168559 | NA | other | downstream | 1044948 | 34949237 ~ 34950309 (-) |
| G1170811 | NA | other | upstream | 89770 | 36090762 ~ 36091417 (-) |
| G1170826 | NA | other | upstream | 109110 | 36110102 ~ 36110439 (-) |
| G1170998 | NA | other | upstream | 492097 | 36493089 ~ 36493524 (-) |
| G1171050 | NA | other | upstream | 593062 | 36594054 ~ 36594526 (-) |
| G1171051 | NA | other | upstream | 594840 | 36595832 ~ 36596641 (-) |
