LOC110485159 (LOC106607264)


Basic Information

Item Value
gene id LOC110485159
gene name LOC106607264
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 36237911 ~ 36281974 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036940933.1
CACAGAGCccactctactcctcctctcttctgcacCCCATTATACTCACCACCACTCTACCCATCCGTGCCGAAAGGAAAGCTTTCAAAAAATTGCTCCGATTTACAATTGGCTGAGCAATAGCGGGCATGCCACGCTGCGACCGAAACAAGGATTCGAGGAGAACATGGAAAAAATGCCTTCACTTTTACAAATGCACTTTATATTTATTCATCTTTAGTCTGGAACTAAACAGCAGCGTTTCAGagccTGTGAATGGTGATGTGTTTGTGTTCTTCCACGAGGGGGCTCAGGGCTGTCTAGGGGTGCAGGGtcactccctgtccctgtccgagTCCTGCGAGGATGACGCCCAGAAGTGGAAGTGGGTGACCAGGGGCCGGCTCTTCAACCTAGGCTCCTCTCTGTGCCTGGGCCTGACAACAGGCAACTACAGCTCCAGGGAGGACTTCTCACCACTGGGCGTCTACCCCTGTGACAGAGAGCCTCCAGGGGTCCGATGGACCTGGTACTGTGCCCATGTGTTGGAGAACCTCAACCTGTACATGCCGTCACCCTCGCACCCTGTTAACCCCTCCGCTAACTCCTCAGCGGTGGCCTCGGATGTCAAGCCACCACGAGAGGGGCTCAAGTGGAGGCTCTTTGGGGACGATCAGGACCTTTGTTCTAGGGCCTATCGTGAGATCTATACTATCCAGGGGAACTCTCACGGTCGGCCCTGCTACCTGCCCTTCATGTACGATGGCCAGTGGTTCCACAACTGCACCAGTATTGGCAGAGAGGACGGTCACCTGTGGTGTGCCACCACTTTCGACTATGGCAAGGACGAACGCTGGGGCTTCTGTCCTGTTAAGAGCAATGACTGTGAGACATTCTGGGACACAGACCCCCTGACAGACAGCTGCTACCAGTTCAACTTCCAGGCCACCCTGTCATGGAGCGAGGCTCGCATCAGCTGCCAACAGCAGAGGGCTGACCTGCTCAGTATCACCAAGCTGCATGAGCAGACCTACATCAACGGTTTGCTGACTGGTTACAGTGCTGCCCTGTGGATCGGTCTGAATGACCTGGACATCAGCGGAGGTTGGCAGTGGGCTGACTCCTCCCCGCTCAAATACCTCAACTGGGAGAACGACCAGCCGAGCCATGTGGATGAGGAGAACTGTGCGGTGATCAGAACAGAGTCGTCCGGCCGCTGGCAGAACAGAGATTGCTCTGTAGCCCTTCCCTACGTCTGTAAGAAGAGACCCAATGCCACCCTGGACCCCTTCACCACCGACTCGTGGGCGGATGATGAGAAGTACGAGTGTGATGTGGGCTGGCAGGCGTTCCAGGCAGGCTGCTACAGACTGACGTCAGAGAAGGTGGACTGGGACGCTGCTCAGAAAACCTGTCAGAAAATGGAGGCCAACCTGGTCAGCCTCCACACCCTGCCTGAACTAGAGttcatcatcaacaacatcaagcGAGATGTGGAGGAGCTGTGGATTGGTCTCCATGACACGGCTATGCAGATGGACTTCCAGTGGACAGACCACACGCCCGTCATCTTCACTTACTGGCATCCCTTTGAGCCCAACAACTTCCAAAACACCCCAGAGGACTGTGTCACCATCTGGGGACCCgaAGGCCGCTGGAATGACAGTCCCTGTAACCAGACCCTGCCGTCCATCTGTAAGAAAGCAGCCCAGAAGACTGACGGACAGGCACAGGACCACGGGTGCAAACCAgGCTGGAGATGGCACAGTCCGGCCTGCTACTGGGTGGGAGAGGAGCAGGTGACCTTCGAGGAGGGCAGGAAGGCCTGCGCTGGCAGCGGAGCAACCCTCATCACCATCACcaatagGTTTGAGCAGGCATTTGTCAACAGTCTGGTGTTTGGCCGTTCTGGGGATTCGTTCTGGATAGCCCTGCTTGACCAGAAAAGCCCCGGGAAATTCCGCTGGCTCAGCGGGGATGAAGTGGCCTATACCAACTGGAACAGAGACCAGCCAGgaggaaacaTCAAAGGGGGCTGTGTAACCATGGAGACGGGCTATGCCACAGGCCTATGGGAGGTGAAGGACTGTGCGTCGGCCCGGGCCAAGTTCATCTGTAGACTGAACCAGGACACGTCCCTCAGCCCTGAGCCCCCCACCCCGCACCCCACCCCCAGCCTCACTGGATCCTGCCCCAACGGGTGGAAGACAAACGGCAAGCTGCACCACTGCTACAAGGTGTTCGACTCGGCCCAGATGGACCAGAAGCTGAGCTGGCTGCAGGCCCACCTAGCCTGTCTAAGACACCATGGAGCCAACCTGCTGAGTGTCAGTGGCCCAGAGGAGGAGCACTTCATACTGCAGATACTACATGAAGCCTTTGGGGAGTCAGAGGACCATGAGCAGCGCTGGTTCTGGATCGGCCTGAACCGCAGGAACCCCATGGACAACGGTAGCTGGAAGTGGAGCGATGGACTGGCTTATACGTACCAGAACTTTGGGCGTTACAACTACAACGTCCGTCAGTGTGCAGCAGCAGATCTGGGCACCATGACCTGGCTGGCCATGCGCTGTGACGCTGAACTGGACTGGATCTGCAAGATCCCCAAAGGAAATGTTGATAAGGATCCAAACCCCACTGAAGcccccaCTGCCAGTGAGTGGGTGGGCTTCCAGGAGGCAGAGTATAAGTTCTTCGACCACCGGTCTACATGGGACCAAGCCCAGAGGATCTGCTCCTGGTTCGGTGCTTCTCTGGCTTCCATCCACTCTTCTGCGGAGGAGGTTTTCCTTGCCAACACACTGCACAAGATGACCAAGGTAGAGGGGGACCACTGGTGGGTGGGGCTTCATACGTATGAGAACGATGGCCGTTTCCACTGGTCAGACCACTCTGTGCTCAACTATGTGTCCTGGGCTCTCAACAGGCCACACCCACTCAGCCGCGACCGCAAGTGTGTCCACATGTCAGTCAGCAAAGCGGAGTGGGCAGATCAGAAATGCCACTCAGACTTGCCCTACATCTGTAAGAGAGTGAATGTCACAGGCACTATCCCACCCACACCCTCCATCCCCCTGCCCCCCGCGGGCTGCCCCGATGGCTGGGGCCCCTTCCTACACAAgtgttatAAGGTGTTTGGTCATGAGGAGAGCCGGAGGGCCACATGGTCAGGAGCCAGGCTCATGTGTGAGTCACAGGGAGGAGCCTTGGCTGTGGTGCCCAATCACGTGGAGCAAGCCTTTGTcaccactctgctgtccaacgtGAGTTTTGACCTGTGGGTGGGGCTCACGTCTGACTCTAAAGGCCACTTCCAGTGGGCTCGTCCTGGACTCCTCAGCTACACCAACTGGGCCTCTGGAGAACCCCTGGACAACAGTGGACCACTCCACAACAAGAGTCCGGGCAACTGTGTGGTGATGATCCATGGGAACCCAGCTAAAAATACTGGCATGTGGGCATCCCGGGCCTGTGAGATGGAGAAACATGGCTACATCTGCCAGAAGAAACAAGACCCAGCTCTGCCCCCTGGCGCtgccctcctgccctcctccctGTCCGGAGCCCTGGACCTGGGTGGGGTGTCGTACCGCATAGTGAGGAAGCGCCTGGACTGGATGGGGGCGCTGCATGTGTGCGAGTCTCTGAACGGGACGTTGGCTTCAGTGAGAGACCCCTACCAACAGGCTTACCTCACCCTGCTGATGAACAGCCTACACCTCCCAGCATGGATAGGCCTTTACAACTATGGGGGACGGCACTTCAGCTGGTTGGGCGAGGAGGACCTGATTTACACTGCCTGGCGGGATGGGGAGCCTAATACACTGTCTGGATGTGGTCACATGACCACGGTGGGGCAGTGGACTATGACCCCCTGTGACGCTAAACTGGATGCTGTCATCTGTCAGAttaatacagaggaggctTTGGTGCACAAGTGGAGTTTTCCAGGACAGTGCCCTCACTCTCTGGGCGACTGGGCCTGGGTGCCTTTCAGGAACCACTGCTACTCCTTCAACCTGCAGAGCCTCCGGCTGCAGACCGACGCCCACTCCTCCTGCAGGAAGGtggGTGGCCAGCTGCTGTCGGTCCTGGATGAAACAGAGAATGGCTTTGTGTGGGAGCACATCCAGGGCTACCAGGAGCAGGCCCACGGAGCCTGGCTGGGTATGACCTTTAACTCCAAAGGGGGCAGTCTGATGTGGTCAGAGAGTGCAGAGGTGAAGTTCACTAACTGGGAGGTGCAGGGCACCAACTTGAGCACGCTGTTTCCCAACGCCTGCTTCTGGATCCAGAGCAACACAGGCCTTTGGAAACCAGGCTCCTGCAAGAACCACACACACGGAGTCATCTGCAAACGGCAACGCAGTGCTGAGGCTTTGGCGGTAGTCTctGAAGAGGACCACCTGCCCACTCTGATTGTGATCATGGTGACGGGCCTGGCGTTGGTGATCCTCATCGCAGGCGTGATCTACCTGTACCGCCGGCGCCAGGCAGGCTCCCGTGGATCTTACGAGGGGGCGCGCTACAGCCGCACCAACTCCAACCCCTCCGAACAGGCCGAGAAGAACATCTTGGTGTCTGACATGGAGCTCAACGAGCAGCCGGAGTAGCACAGCCAACCAGGCCTGGCCCCTCCCCCCCGGGGCAGGAGACACCTGGGAGTACCTAATACTGACTGACCCACTGTCTGACTGATACGCATTCTGCTTCTACATTTTATGTCCCTGTTCTGTTTGAAAAGATGCTGAAGATGCTGAAGGTCTGTGCTGTGTCGAGCGCAGCAGATGCCAATCAAATTCCATTTAAACAGTCATTCTCCAAAGGGGTTAATAATATGCAAATTACAATATGAACTGCTTTTCTTAGTAGTATAGCAATAATGTTTCTGATGTCAGTTTCACATTTCATTTCAAACACTTCCTGTTTTTGGTCCCTAAGTCAAAAAGGCAGATGCCAAAAGCCAAAGACTAAGGCTTTGCACCAGTTCTTCCCTCGTCAGGAGACTCAGTATCATCCAGATATCCACAATTTCCATCGAGACCATGACAGTATTTACCTGAGGTTAACTTCAGGTTTGTTTTGTATATTTCCTTTtggtttgttttgtgtgtttttttgtccaGTGCAGCTGTAGTGAATCTGTAGCGAATCCTCCTTCTAATTCTGGCTGTTGTGGTGAAGCTTTTGTTGTTGCCCGACCCCTTCCCTCCCCCCCTTCTGTTCTGACTGACACGTCAGCAAAGGCTGGTTGGAAAGCAATACTTACTTCAGTGTGGAAGAGAAGAGGACAGTGATTTTTAGAGTGGTGATTTTAGAGTGATTTTAACGAGTCCCTGGCCTGTTCACCACAACTGCACAtgcagtaggagagagagagagagaaatttgaCGTTGATACAGACTGATACCGTCTTTTGTTGTCTTGGTACAGTGTGATGGGGTCGATAAGGGTATGACACCCATTATATTTCAGTATGTAACATTCTAGAGGGTTTTAGAGGGTTTGTTTTAGCACTTTCTACCACCATCATGAGAAGAGCCAACATTTATtacttaaagtaactgtccagtgtttccagatttctatgaaataggacctataattaattacaatatgagtgaaatagttttccttaaaaatgttaaaaagcagcttttctgtgttggaatggtgtgggcgtaccccaacaacagaatggtgtgggagtataTGGGTCATTAAAAATATTCATGCGAGTAGACCGCTGACCGCCAGCACATCCTCCTTAGGAGGATGAAATCATCTTCTATGAGGAAGTAGCAAGTGTTTTTTTAAacagtctgtttgagatacaGGTTTGAGGTGGGTTTTTTTAAGTATTTTTTCTCCAATTCATGCTTTGACCACAAATACGAGTATAGGATAAGTCAACAACATTACTTGGTTATGGGTTAACAGAAGaaaaaagtgagattttcactagACAGTTACTTTTGTTTTtgttgatcttgtctcatcgctgcaactccccaacggtcTCAAGAGGAGCGACGgtcaagtcatgcatcctccaaaaGATGACCTGCCAAACCACACTTCTCAACACCCACCCGCCAGCTGCACTCTCCAACTAATTACAGCATGCAGGCACCCAGCCTGCCACAAGAGCACAATGACTCAAATaaagccccccggccaaaccctccccggacaacgttgggccaattgtgcgccgccctatggaactcccggACATGAACAGTTGTGACACAGGCTGGTATTGAACCTGGGCCTGTCGTggcaatgcagtgtcttagaccactgtgccactcagaaGGCCTCTAGACAGTTACTTTAAGCAAAGGACAGTGCATTCACTCCTTTGTTTATGTGTTATTACTAAGGTACTTTTCAattgtttttgtgttatttccTTCCTTTGACTTTTGGATGGGTAACATGGTGTAAAGTATGTGAACGTC

Function

NR:

description
C-type mannose receptor 2

GO: NA

KEGG:

id description
K06560 MRC, CD206, CD280; mannose receptor, C type

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036940933.1 True 6444 mRNA 0.53 29 36237911 36281974
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110486226 LOC106607262 coding downstream 147926 36047634 ~ 36089985 (-)
LOC110486224 phb coding downstream 198654 36035614 ~ 36039257 (-)
LOC110486223 LOC106607259 coding downstream 203260 36007038 ~ 36034651 (-)
LOC110485158 LOC106607258 coding downstream 236919 35995257 ~ 36000992 (-)
eftud2 LOC106607257 coding downstream 245251 35978405 ~ 35992660 (-)
LOC110486229 LOC106607265 coding upstream 4076 36286050 ~ 36296738 (-)
mettl2a LOC106600997 coding upstream 14894 36296868 ~ 36303168 (-)
LOC110486231 LOC106607266 coding upstream 25651 36307625 ~ 36331668 (-)
LOC110486234 LOC106607269 coding upstream 91550 36373524 ~ 36376546 (-)
LOC110486235 LOC106607388 coding upstream 107896 36389870 ~ 36397697 (-)
G1170852 NA non-coding downstream 66087 36171615 ~ 36171824 (-)
G1170842 NA non-coding downstream 68362 36169219 ~ 36169549 (-)
G1170849 NA non-coding downstream 87249 36149951 ~ 36150662 (-)
G1170835 NA non-coding downstream 111495 36125735 ~ 36126416 (-)
G1170816 NA non-coding downstream 137937 36099769 ~ 36099974 (-)
G1170911 NA non-coding upstream 22238 36304212 ~ 36304487 (-)
G1170933 rprml non-coding upstream 56109 36338083 ~ 36339523 (-)
LOC110486237 LOC106601002 non-coding upstream 131052 36413019 ~ 36470174 (-)
G1170937 NA non-coding upstream 137288 36419262 ~ 36492284 (-)
G1171001 NA non-coding upstream 213526 36495500 ~ 36495714 (-)
G1170826 NA other downstream 127472 36110102 ~ 36110439 (-)
G1170811 NA other downstream 146494 36090762 ~ 36091417 (-)
G1170691 rl19 other downstream 373267 35862152 ~ 35864644 (-)
LOC110486204 LOC106607517 other downstream 1055264 35170206 ~ 35182762 (-)
G1170998 NA other upstream 211115 36493089 ~ 36493524 (-)
G1171050 NA other upstream 312080 36594054 ~ 36594526 (-)
G1171051 NA other upstream 313858 36595832 ~ 36596641 (-)
G1171057 hsp70b other upstream 462798 36665169 ~ 36828425 (-)
G1171149 NA other upstream 602044 36884018 ~ 36884340 (-)

Expression

LOC110485159(LOC106607264) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 15.
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LOC110485159(LOC106607264) Expression in each Bioproject

Bar chart with 20 bars.
LOC110485159(LOC106607264) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
End of interactive chart.

Co-expression Network