LOC110486249 (LOC106607278)


Basic Information

Item Value
gene id LOC110486249
gene name LOC106607278
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 36688159 ~ 36692640 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021557695.2
CGAGCAGTCACGCCTTGCGTCCACTGCGCATGTCAGTAATTCCGTCTGTGTTTTGAgtttatgtttgtgtgtctgcgtgtgtgttctTTCCCACACGAGTTTACTGCAATTCCGAATTCTCACAACCACCGCCAGAATGGCAGCTGCACCCCCGAACCCAGACGACTCTAGTCGGGGTAGTAGCGGTAGCAGCGCGCCCAGCGTCCTTGTCGGGGACGGGGACACGGAAGAGGCCGAGGAtttcacctcctcctcccactgcaCAGAGCTGTCTCGGCGGCAGAACGAACAGAGGAAGCAGGGATTGTTCTGCGACGTGACGCTGGCCTTCAGCAGTGGGGCGGCAACCGGGAATGTTCAGAGCTGTGAGTTTTCCGCTCATCGTTCTGTACTGGCCGCGGCTACGGACTATTTCACGCCGTTGCTGGGAGGGCAGTTCTCCGAGTCGCTGTCGGGTCGGGTTGAGATGAAGGAATGGAGCGCTGAATTGGGACCAGACCCGGAGACGGTGGAGAGTGTCATTCAGTACATGTACACGGGAGAAATACGTGTGAGCACCTGCAATGTGCATGAAGTGTTAGAGCTTGCTGACAGGTTCCTGCTGCTGCACCTGAAGGAGTTCTGTGGGGAGTTCTTGAAGAAGAAGCTGAGCCTGGCCAACTGTGTGGCGGTGCACAGCCTGGCCCACATGTACACCCTGGACCAGCTGGCTCTGCGGGCCGCAGACATGATCCGACGCAATTTCCACAAGGTCATCCAGGACGAGGAGTTCTACACCCTGCCCTTCCACCTGGTGAGGGACTGGCTGTCTGACGCAGAGATCACCGTGGACGAGGAAGAGGTGCTGTTTGAGGCTGTGGTGAAGTGGGTccagaggaacacagaacagcgGGGGAGGTACTTTGAGGAGTTGTTCCGTCTCCTCCGGCTACCCCAGATTAAGCCCACCTATCTGACGCGCGTGGTGAAGAACGAGGCACTGGTGGCGGCCAACGAGGCCTGTCTCCGCCTGGTGTCCGATGCCGTGGAGGGCCACGCCATCCGCTGTGAGAACCtcaagtcagctgacctggagttCTGGTCGTCCTACATGGCCTCCTTCCAGCCGCGCTTCGGTCAGAACATGGACGTGATCATGGTGGTGGGCGGGGTGTCGGAGGGGGGTGACTACCTGAGTGAATGTGTGGGTTACTTCATCTACGAGGACCGCTGGGTTAACCTGCCCCACATCCACAACCACCTGGATGGCCATGCCATCGCCACCACAGAGTCCCACATCTACGTAGCGGGATCCATGGAACCGGGCTTCGCCAAGACCGTGGAGCGCTATAACCCCAACCGCAACACCTGGGAACAGGTGAGCAACCTGACCACACGTAAACACTCCTTTGGTCTCACCTGTATCAAAGACATCCTGTATAGCATCGGTGGCCACGGCAACTTCAGCCCCGGCTTCAAGGACGTGAGCGTGTATGAGCCTGAGCCAGACAAGTGGCACAACCTGGAGTCAGCACCCAAGATCCTGCGGGACGTGAAGGCGGTGAGTGTGGAGGACCGCTACGTATACGTGACGGCGCGCACGCCAGTGGACACAGACAACGAGGACGGGCTGAAGACGGTCACCACACGTTACGACACAGAGAGCCGCCAGTGGCAGGACGTGGACTCCCTGCCGCTCATAGACAACTACTGTGTGTTCCAGATGGCCGTGGCCCCCACCAACTTCTACCACACGGCCTCGTGCTGCCCTAAGAGCTACACGGTGCGGGATGAGGCCGCCAAGCAGAAGATCAGCGCCCACATCTCAGACGAGATCCTGGAGAGCTTGCCGCCCGAGGTCACCAGCATCGAGGGCGCCGCCATCTGCCACTTCGACGAGGACGTGTTTGTGATCGGCGGCTGGAAGAACAGCGATGACGTGGACAAGCAGTACCGCAAAGAGGCCTACCGCTACTCTGCCGAACGGAAGCGCTGGATGCTGCTGCCGCCCATGCCCCAGCCCCGCTGTCGCGCCACCGCCTGTCACGTACGAATCCCCTACCGCTTCCTGTACGGCTGCCAGCGCTACCCCATGCCCCAGAACCTGGCCCGCCAGCGGGACCGTATGCAGCAGATGCAGCAGCTACACCGGCGCACCCTCACCCTGCGCAGGCAGCTGCAGTCTCAGATCGAGTGCTGAGCTGTCACAACCCCTGTCTGTCCATCACACCCACCCCAGTGGGGGAGCAGCCCAGTCCAGCTCCAAGCCCCAAACATCCCCTGGCAGCCATCGTCATCAACCCCCACCCATAACCTGCTGGAGCAGCGGCTCCTATGTTGCTCTCATGTTGGTTCATTTTCAAGAGATCTGTGCCAGATCATCAGGTTGAGATATTGGTGTTAGTAGTGACTGTGGTGTTCAAGGCTGGGAGGTGTGGGAGTGATGTGACTCTGTGCTGGCCAGGTGTTTGTCTATGTGGGGAGGACAGGCTGAATGTTACAAATGTGAATAGAGTGTTGTACAGTGACCAACATCGGACTACACTACGTATGTATGTCAGGCCCAGGTGATGTTTATCTTTTTATACATGTATATAGTTGTATATGtatacttttattatatataaatattttgtgTCCCCCTTTTATGCTTATATGATGTAGGCAATGTGACACTTATGTACGGCAGAATCTACATTCCTCCAATCCAATGTGCTTAGTGAAGTCAGTCGTTCTCTATGACATTCCACACTGACAGTCTGTCCATGCAAAtatcacacacacttacatacacacactctgtgCAGCTGTAGGGtcgggacaataccagtattgcGATGCTCGTTAGTGTTGTGGCAAGTGAACGTAACACAAAgcagatttaacttctttaggaaaacaaacatttaatgttttcatccagagtcacatttatttttccacaaatattttacattttacatgGGAAAAGTATTGCGATACTGGTGTCATGCTGGCCCTACCAATCAGTTGGACCAAACCCTTACCAATGCCCGATGGCTTTGCTTTATATTAGCTTCATCTGAATGGCTCTGCTTCTTGTTATTATAGCTTTGATACAGGAGCTCAACATGAATGGAAGGAGAATAGTCTCATTCCTATTTATTATCAGATCTACTGTCCAAGAGTGGACAAGAGCCTGGACtagaacccagaatctctagtggcacagccacagcaccacttgggaggcccatTAAGGAAACAGTCTTAACATGGTAACATTCCATCAACCATTGCGTTGAATTATTCTTCAGTCTTCTGCTCGTCACATTCCTGTTGGTTGGAAACATTGTGTGGAAGGCCCTAGGTGGGAGTCTGTGAGTGAATGtttctctttttgtttttgtCTGCATTGGTTTTATGGAGTTTAATGGCTGGAGGGTGTAGTTCCGATGGAGGACTTGATAACGTGTGTGTCTTGAGTACGGTAAGAATGCTTGGCAAAGCTGGTGAAAAGCATGCCTAGTAGTGCACTTCTACCCTTAATCAGTTGGTCATATTTATGTCCGATTGGGTTTACCTGTTATATTTggccaatttttatttttttatgtatcaTTTAATCCAACTCCAGCCGATAATCTATTCTGTTCCCATGTGAGAAAATATGTACACTAGAGTGATTTGCCTAGTAATCCAAAATGAATGTGATGTGAAGTGTGAGGGAAACCTGTTGCTGTACCTCAGGGCTTATTCAGGGGTTCATCTGAGAGATCCGGCCGGCCACATTGTTGCATGTTCTCCTCACCCTCCAAAGACAATCAGGgggagggggtacttcaggggtactctgggcagagcaaaattcagttaGTGGTACGGTAACCAAAAAAGGTTGTGAACCACTGGTATAGACTAGAGGGTATCCTTATGTTACTGAGCGGAATGACCATATCAAGGTGAATGTGTTGAGTTCAAGAGTTCATTGATTGTTATAAGCACTATCCCTGAAGCTAATTTATAACATAAAGCACTATGATTTTGAGAATGCAATGCAAGTGTATTTCCTCAGTTTTGTTTCTCTTGCATAGCATTTGAAATAATTGTATTGACATATGTTGGCAATATATATGTTGCTTTGCATGTGGCAGTCGGGCATTGGGTCAATATAttggatgtaaaaaaaataaaaataaatgctgATGTCATCA

Function

NR:

description
kelch-like protein 11

GO: NA

KEGG:

id description
K10449 KLHL11; kelch-like protein 11

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021557695.2 True 4172 mRNA 0.51 2 36688159 36692640

Neighbor

gene id symbol gene type direction distance location
LOC110486248 LOC106607280 coding downstream 3542 36680465 ~ 36684617 (-)
LOC110486245 LOC106607276 coding downstream 16732 36665145 ~ 36671427 (-)
LOC110486242 NA coding downstream 59760 36621087 ~ 36628399 (-)
LOC110486239 LOC106607271 coding downstream 165399 36505619 ~ 36522760 (-)
LOC118938608 NA coding downstream 171482 36516541 ~ 36516677 (-)
LOC110486250 LOC106607281 coding upstream 540 36693180 ~ 36722611 (-)
LOC110486251 cn37 coding upstream 34059 36726699 ~ 36732207 (-)
LOC118938070 LOC106601019 coding upstream 40478 36733118 ~ 36735718 (-)
LOC110486258 NA coding upstream 41931 36734571 ~ 36737505 (-)
LOC110512845 hsp70b coding upstream 50654 36743294 ~ 36746458 (-)
G1171101 LOC106607274 non-coding downstream 31062 36652759 ~ 36657097 (-)
G1171056 NA non-coding downstream 77112 36610764 ~ 36611047 (-)
G1171049 NA non-coding downstream 95710 36592167 ~ 36592449 (-)
G1171042 NA non-coding downstream 109924 36577070 ~ 36578235 (-)
G1171040 NA non-coding downstream 114581 36573041 ~ 36573578 (-)
G1171116 LOC106601019 non-coding upstream 40616 36733256 ~ 36734575 (-)
LOC118938280 hsp70b non-coding upstream 60376 36750225 ~ 36760370 (-)
G1171122 NA non-coding upstream 61589 36754229 ~ 36762017 (-)
G1171132 NA non-coding upstream 138280 36830920 ~ 36831206 (-)
G1171133 NA non-coding upstream 138616 36831256 ~ 36831589 (-)
G1171051 NA other downstream 91518 36595832 ~ 36596641 (-)
G1171050 NA other downstream 93633 36594054 ~ 36594526 (-)
G1170998 NA other downstream 194635 36493089 ~ 36493524 (-)
G1170826 NA other downstream 577720 36110102 ~ 36110439 (-)
G1170811 NA other downstream 596742 36090762 ~ 36091417 (-)
G1171057 hsp70b other upstream 52132 36665169 ~ 36828425 (-)
G1171149 NA other upstream 191378 36884018 ~ 36884340 (-)
G1171337 NA other upstream 505588 37198228 ~ 37198640 (-)
LOC110486310 LOC106601114 other upstream 2488134 39136920 ~ 39183852 (-)
LOC110486313 snn other upstream 2555512 39248150 ~ 39250310 (-)

Expression


Co-expression Network