LOC118938281 (hsp70b)


Basic Information

Item Value
gene id LOC118938281
gene name hsp70b
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 36757108 ~ 36760119 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036940948.1
AAGTACATTCAGATTCAAACATCGACTCAACGAGAATACTAAAGGGAAAAGAAAGCAAGAAAAGAGAAGAGACACGTTCAACAGACCTCTACATTCATAAACTGCAACTAACTCCAAACCATCAAGATGTCATCAGCTAAAGGCCCGTCTATCGGCATTGACCTGGGCACCACCTACTCCTGTGTGGGGGTGTTCCAGCATGGTAAAGTGGAGATCATCGCCAACGACCAGGGCAACAGGACTACACCCAGCTATGTGGCCTTCACAGACACTGAGAGACTTATCGGAGACGCAGCAAAGAACCAGGTGGCCATGAACCCCAACAACACCGTTTTCGACGCCAAACGCCTGATTGGCCGAAAGTTCAACGATCAGGTCGTGCAAGCCGACATGAAGCACTGGCCCTTCAAGGTGGTCAGCGACGGAGGAAAGCCTAAAGTTCAGGTCGATTACAAAGGTGAGAACAAATGCTTCAACCCAGAGGAGATCTCCTCCATGGTCCTGGTGAAGATGAGGGAGATCGCTGAGGCTTACCTGGGCCAGAAGGTGTCCAATGCAGTCATCACAGTCCCTGCCTACTTCAACGATTCACAGAGACAGGCCACTAAGGACGCTGGAGTGATCGCTGGGCTGAATGTGCTGAGGATCATCAACGAGCCCACGGCGGCAGCCATCGCCTACGGCATGGACAAAGGCATGTCCAGGGAACGCAACGTCCTGATTTTTGACCTGGGTGGGGGCACTTTTGACGTGTCCATCCTGACCATCGAGGATGGGATCTTTGAGGTGAAGGCCACAGCTGGAGACACTCACCTGGGCGGGGAGGACTTTGACAACCGCCTGGTCAGTCACTTTGTGGAGGAGTTCAAGAGGAAACACAAGAAGGACATCAGCCAGAACAAGCGGGCTCTGAGGAGGCTGAGGACAGCCTGCGAGAGGGCCAAGAGAACACTGTCCTCCAGCTCCCAGGCCAGCATTGAGATTGACTCTCTTTTTGAGGGCATCGACTTCTACACCTCCATCACCAGGGCTCGTTTTGAGGAAATGTGTTCCGACCTCTTCAGGGGAACCCTGGAGCCTGTGGAGAAAGCCCTCGGGGATGCCAAGATGGACAAGGCCCAAATTCACGACGTCGTCCTGGTCGGAGGCTCCACCCGGATCCCCAAGGTCCAGAAGCTCCTGCAGGACTTTTTCAACGGCCGAGAGCTAAACAAGAGCATCAACCCAGACGAGGCGGTGGCCTACGGCGCTGCCATCCAGGCGGCCATCTTGTCTGGCGACAAGTCTGAGAACGTCCAGGACCTGCTGCTGCTGGATGTGGCTCCCCTGTCCCTGGGCATCGAAACCGCCGGAGGGGTCATGACCGCCCTGATCAAACGCAACACCACCATCCCATCCAAACAGACCCAGACCTTCACCACTTACTCCGACAACCAGCCCGGGGTCATGATCCAGGTctacgagggagagagagccatgaccaaggacaacaacctcctggGGAAGTTTGAGCTCTCTGGGATCCCCCCTGCCCCACGAGGAGTCCCTCAGATCGAGGTGACCTTTGACATCGACGCCAATGGCATTCTGAACGTATCAGCGGTGGACAAGAGCACGGGCAAAGAGAACAAGATCACCATCACCAACGACAAGGGCCGGCTCAGCAAAGAGGATATTGAGAGGATGGTGCAGGACGCTGACAAATACAAAGCTGAGGATGACGCACAGAGGGAGAAGATAGCTGCCAAGAACTCCCTGGAGTCGTACGCCTTCAATATGAAGAGCAGCGTGGAGGACGACAACATGAAAGGCAAGATCAGCCAGGAGGACAAAAAGAAAGTGGTGGACAGGTGCGACCAGACCATTTCCTGGTTGGAGAACAACCAGCTGGGCGACAAAGAGGAGTATGAGCATCAGCTAAAGGAGCTGGAGAAAGTATGCCAGCCTATCATTACCAAGCTGTACCAGCAGGGAGGGATGCCCACAGGTTGCTGTGGAGACCAGGCACGGACCAGCTCTGGTGACAGCTCCCAAGGCCCAACCATTGAAGAGATTGACTAATGTGAGGGATTTTTATAAAGGACTTTTCAAAATGCATTAGTATCACTGCATACAATTTACTATCCAGGAAATACTTTGTACTTGTAAAAACACACTGTACATCTGTTGCTTCATACCATATTGCATTGCTGGACattgcaaataaaatgtatttaaatatgt

Function

NR:

description
heat shock protein 70b

GO:

id name namespace
GO:0048593 camera-type eye morphogenesis biological_process
GO:0009408 response to heat biological_process
GO:0009410 response to xenobiotic stimulus biological_process
GO:0046686 response to cadmium ion biological_process
GO:0005524 ATP binding molecular_function

KEGG:

id description
K03283 HSPA1s; heat shock 70kDa protein 1/2/6/8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036940948.1 True 2223 mRNA 0.53 2 36757108 36760119

Neighbor

gene id symbol gene type direction distance location
LOC118938280 hsp70b coding downstream 3771 36750225 ~ 36760370 (-)
LOC110512845 hsp70b coding downstream 10650 36743294 ~ 36746458 (-)
LOC110486258 NA coding downstream 19603 36734571 ~ 36737505 (-)
LOC118938070 LOC106601019 coding downstream 21390 36733118 ~ 36735718 (-)
LOC110486251 cn37 coding downstream 24901 36726699 ~ 36732207 (-)
LOC118938277 hsp70b coding upstream 3862 36763981 ~ 36767309 (-)
LOC118938282 hsp70b coding upstream 10756 36770875 ~ 36774178 (-)
LOC118938279 hsp70b coding upstream 17815 36777934 ~ 36788050 (-)
hsp70b hsp70b coding upstream 24695 36784814 ~ 36788029 (-)
LOC110486257 hsp70b coding upstream 31791 36791910 ~ 36795238 (-)
G1171116 LOC106601019 non-coding downstream 22533 36733256 ~ 36734575 (-)
G1171101 LOC106607274 non-coding downstream 100011 36652759 ~ 36657097 (-)
G1171056 NA non-coding downstream 146061 36610764 ~ 36611047 (-)
G1171049 NA non-coding downstream 164659 36592167 ~ 36592449 (-)
G1171042 NA non-coding downstream 178873 36577070 ~ 36578235 (-)
G1171132 NA non-coding upstream 70801 36830920 ~ 36831206 (-)
G1171133 NA non-coding upstream 71137 36831256 ~ 36831589 (-)
G1171068 NA non-coding upstream 95758 36855877 ~ 36856985 (-)
LOC110485161 LOC106607288 non-coding upstream 97320 36857430 ~ 37073395 (-)
G1171139 NA non-coding upstream 107852 36867971 ~ 36868185 (-)
G1171051 NA other downstream 160467 36595832 ~ 36596641 (-)
G1171050 NA other downstream 162582 36594054 ~ 36594526 (-)
G1170998 NA other downstream 263584 36493089 ~ 36493524 (-)
G1170826 NA other downstream 646669 36110102 ~ 36110439 (-)
G1170811 NA other downstream 665691 36090762 ~ 36091417 (-)
G1171149 NA other upstream 123899 36884018 ~ 36884340 (-)
G1171337 NA other upstream 438109 37198228 ~ 37198640 (-)
LOC110486310 LOC106601114 other upstream 2420655 39136920 ~ 39183852 (-)
LOC110486313 snn other upstream 2488033 39248150 ~ 39250310 (-)
LOC110486318 kdm8 other upstream 2568097 39328216 ~ 39331966 (-)

Expression


Co-expression Network