hsp70b (hsp70b)


Basic Information

Item Value
gene id hsp70b
gene name hsp70b
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 36784814 ~ 36788029 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001124745.1
CAACGAGAATACTAAAGGGAAAAGAAAGCAAGAAAAGAGAAGAGATACGTTCATTCTCTACATTCATAAACTGCAACTAACTCCAAACCATCAAGATGTCATCAGTTAAAGGCCCGTCTATCGGCATTGACCTGGGCACCACCTACTCCTGTGTGGGGGTGTTCCAGCATGGCAAAGTGGAGATCATCGCCAACGACCAGGGCAACAGGACCACACCCAGCTATGTGGCCTTCACAGACACTGAGAGACTTATCGGAGACGCAGCAAAGAACCAGGTGGCCATGAACCCCAACAACACCGTTTTCGACGCCAAACGCCTGATTGGCCGAAAGTTCAATGATCAGGTCGTGCAAGCCGACATGAAGCACTGGCCCTTCAAGGTGGTCAGCGACGGAGGAAAGCCTAAAGTTCAGGTCGATTACAAAGGTGAGAACAAATGCTTCAACCCAGAGGAGATCTCTTCCATGGTCCTGGTGAAGATGAGGGAGATCGCTGAGGCTTACCTGGGCCAGAAGGTGTCCAATGCAGTCATCACAGTCCCTGCCTACTTCAACGATTCACAGAGACAGGCCACTAAGGACGCTGGAGTGATCGCTGGGCTGAATGTGCTGAGGATCATCAACGAGCCCACGGCGGCAGCCATCGCCTACGGCATGGACAAAGGCATGTCCAGGGAACGCAACGTCCTGATTTTTGACCTGGGTGGGGGCACCTTTGACGTGTCCATCCTGACCATCGAGGATGGGATCTTTGAGGTGAAGGCCACAGCTGGAGACACTCACCTGGGCGGGGAGGACTTTGACAACCGCCTGGTCAGTCACTTTGTGGAGGAGTTCAAGAGGAAACACAAGAAGGACATCAGCCAGAACAAGCGGGCTCTGAGGAGGCTGAGGACAGCCTGCGAGAGGGCCAAGAGAACACTGTCCTCCAGCTCCCAGGCCAGCATTGAGATTGACTCTCTTTTTGAGGGCATCGACTTCTACACCTCCATCACCAGGGCTCGTTTTGAGGAAATGTGTTCCGACCTCTTCAGGGGAACCCTGGAGCCTGTGGAGAAATCCCTCGGGGATGCCAAGATGGACAAGGCCCAAATTCACGACGTCGTCCTGGTCGGAGGCTCCACCCGGATCCCCAAGGTCCAGAAGCTCCTGCAGGACTTTTTCAACGGCCGAGAGCTAAACAAGAGCATCAACCCAGACGAGGCGGTGGCCTACGGCGCTGCCATCCAGGCGGCCATCTTGTCTGGCGACAAGTCTGAGAACGTCCAGGACCTGCTGCTGCTGGATGTGGCTCCCCTGTCCCTGGGCATCGAAACCGCCGGAGGGGTCATGACCGCCCTGATCAAACGCAACACCACCATCCCATCCAAACAGACCCAGACCTTCACCACTTACTCCGACAACCAGCCCGGGGTCATGATCCAGGTctacgagggagagagagccatgaccaaggacaacaacctcctggGGAAGTTTGAGCTCTCTGGGATCCCCCCTGCACCACGAGGAGTCCCTCAGATCGAGGTGACCTTTGACATCGACGCCAACGGCATTCTGAACGTATCAGCGGTGGACAAGAGCACGGGCAAAGAGAACAAGATCACCATCACCAACGACAAGGGCCGGCTCAGCAAAGAGGATATTGAGAGGATGGTGCAGGACGCTGACAGATACAAAGCTGAGGATGACGCACAGAGGGAGAAGATAGCTGCCAAGAACTCCCTGGAGTCGTACGCCTTCAATATGAAGAGCAGCGTGGAGGACGACAACATGAAAGGCAAGATCAGCCAGGAGGACAAAAAGAAAGTGGTGGACAGGTGCGACCAGACCATTTCCTGGTTGGAGAACAACCAGCTGGGCGACAAAGAGGAGTATGAGCATCAGCTAAAGGAGCTGGAGAAAGTATGCCAGCCTATCATTACCAAGCTGTACCAGCAGGGAGGGATGCCCACAGGTTGCTGTGGAGATCAGGCACGGACCAGCTCTGGTGACAGCTCCCAAGGCCCAACCATTGAAGAGATTGACTAAAGTGAGGGATTTTTATAAAGGACTTTTCAAAATGCATTAGTATCACTGCATACAATTTACTATTCAGGAAATACTTTGTACTTGTAAAAACACACTGTACATCTGTTGATTCATACCATATTGCATTGCTGGACattgcaaataaaatgtatttaaatatgtT

Function

NR:

description
heat shock protein 70b

GO:

id name namespace
GO:0048593 camera-type eye morphogenesis biological_process
GO:0009408 response to heat biological_process
GO:0009410 response to xenobiotic stimulus biological_process
GO:0046686 response to cadmium ion biological_process
GO:0005524 ATP binding molecular_function

KEGG:

id description
K03283 HSPA1s; heat shock 70kDa protein 1/2/6/8

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001124745.1 True 2193 mRNA 0.53 2 36784814 36788029

Neighbor

gene id symbol gene type direction distance location
LOC118938282 hsp70b coding downstream 10636 36770875 ~ 36774178 (-)
LOC118938277 hsp70b coding downstream 17505 36763981 ~ 36767309 (-)
LOC118938281 hsp70b coding downstream 24695 36757108 ~ 36760119 (-)
LOC118938280 hsp70b coding downstream 31477 36750225 ~ 36760370 (-)
LOC110512845 hsp70b coding downstream 38356 36743294 ~ 36746458 (-)
LOC110486257 hsp70b coding upstream 3881 36791910 ~ 36795238 (-)
LOC118938283 hsp70b coding upstream 10775 36798804 ~ 36802004 (-)
LOC118938284 hsp70b coding upstream 17824 36805853 ~ 36809163 (-)
LOC118938278 hsp70b coding upstream 23466 36811495 ~ 36814605 (-)
LOC118936524 hsp70b coding upstream 30340 36818369 ~ 36828427 (-)
G1171122 NA non-coding downstream 22797 36754229 ~ 36762017 (-)
G1171116 LOC106601019 non-coding downstream 50239 36733256 ~ 36734575 (-)
G1171101 LOC106607274 non-coding downstream 127717 36652759 ~ 36657097 (-)
G1171056 NA non-coding downstream 173767 36610764 ~ 36611047 (-)
G1171132 NA non-coding upstream 42891 36830920 ~ 36831206 (-)
G1171133 NA non-coding upstream 43227 36831256 ~ 36831589 (-)
G1171068 NA non-coding upstream 67848 36855877 ~ 36856985 (-)
LOC110485161 LOC106607288 non-coding upstream 69410 36857430 ~ 37073395 (-)
G1171139 NA non-coding upstream 79942 36867971 ~ 36868185 (-)
G1171051 NA other downstream 188173 36595832 ~ 36596641 (-)
G1171050 NA other downstream 190288 36594054 ~ 36594526 (-)
G1170998 NA other downstream 291290 36493089 ~ 36493524 (-)
G1170826 NA other downstream 674375 36110102 ~ 36110439 (-)
G1170811 NA other downstream 693397 36090762 ~ 36091417 (-)
G1171149 NA other upstream 95989 36884018 ~ 36884340 (-)
G1171337 NA other upstream 410199 37198228 ~ 37198640 (-)
LOC110486310 LOC106601114 other upstream 2392745 39136920 ~ 39183852 (-)
LOC110486313 snn other upstream 2460123 39248150 ~ 39250310 (-)
LOC110486318 kdm8 other upstream 2540187 39328216 ~ 39331966 (-)

Expression


Co-expression Network